BLASTX nr result

ID: Cinnamomum23_contig00031565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00031565
         (325 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010249352.1| PREDICTED: DNA cross-link repair protein SNM...    65   2e-08
ref|XP_010249351.1| PREDICTED: DNA cross-link repair protein SNM...    65   2e-08
ref|XP_010249350.1| PREDICTED: DNA cross-link repair protein SNM...    65   2e-08

>ref|XP_010249352.1| PREDICTED: DNA cross-link repair protein SNM1 isoform X3 [Nelumbo
           nucifera]
          Length = 474

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 7/97 (7%)
 Frame = -2

Query: 324 EEEEEFSIFDAIFENEFPSSPLSDPESEQL--DWPDHTDGSIXXXXXXXXXXFYRSGTDW 151
           +EEE+ S+ +++ ++  PS  LS PES+    +   + D  I          FYRSGTDW
Sbjct: 6   DEEEDISVAESLDDDGLPSLELS-PESKDRGREQNGNKDRVIEAAEGSFVSDFYRSGTDW 64

Query: 150 SFLKQK-----PQDAKLKQADLFQMWGFKKPQEANSR 55
           S L +K     P + KLKQ +LF++WGFKKP ++N++
Sbjct: 65  SCLLEKNTQERPPERKLKQTNLFELWGFKKPDDSNAK 101


>ref|XP_010249351.1| PREDICTED: DNA cross-link repair protein SNM1 isoform X2 [Nelumbo
           nucifera]
          Length = 476

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 7/97 (7%)
 Frame = -2

Query: 324 EEEEEFSIFDAIFENEFPSSPLSDPESEQL--DWPDHTDGSIXXXXXXXXXXFYRSGTDW 151
           +EEE+ S+ +++ ++  PS  LS PES+    +   + D  I          FYRSGTDW
Sbjct: 6   DEEEDISVAESLDDDGLPSLELS-PESKDRGREQNGNKDRVIEAAEGSFVSDFYRSGTDW 64

Query: 150 SFLKQK-----PQDAKLKQADLFQMWGFKKPQEANSR 55
           S L +K     P + KLKQ +LF++WGFKKP ++N++
Sbjct: 65  SCLLEKNTQERPPERKLKQTNLFELWGFKKPDDSNAK 101


>ref|XP_010249350.1| PREDICTED: DNA cross-link repair protein SNM1 isoform X1 [Nelumbo
           nucifera]
          Length = 503

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 7/97 (7%)
 Frame = -2

Query: 324 EEEEEFSIFDAIFENEFPSSPLSDPESEQL--DWPDHTDGSIXXXXXXXXXXFYRSGTDW 151
           +EEE+ S+ +++ ++  PS  LS PES+    +   + D  I          FYRSGTDW
Sbjct: 6   DEEEDISVAESLDDDGLPSLELS-PESKDRGREQNGNKDRVIEAAEGSFVSDFYRSGTDW 64

Query: 150 SFLKQK-----PQDAKLKQADLFQMWGFKKPQEANSR 55
           S L +K     P + KLKQ +LF++WGFKKP ++N++
Sbjct: 65  SCLLEKNTQERPPERKLKQTNLFELWGFKKPDDSNAK 101


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