BLASTX nr result

ID: Cinnamomum23_contig00031068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00031068
         (245 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KJB09802.1| hypothetical protein B456_001G167800 [Gossypium r...    84   4e-14
emb|CDP17425.1| unnamed protein product [Coffea canephora]             67   4e-09

>gb|KJB09802.1| hypothetical protein B456_001G167800 [Gossypium raimondii]
          Length = 330

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 43/61 (70%), Positives = 46/61 (75%)
 Frame = -3

Query: 234 WGFFEAACCLLSTSRAKTAPFFHFPSFVRPXXXXXXXXXGYLAGVVAVVCHEVPMDKGTS 55
           WG    +CCLLSTSRA TAPF +FPSFVRP         GYLAGVV+VVCHEVPMDKGTS
Sbjct: 169 WGL--RSCCLLSTSRAFTAPFCNFPSFVRPRGCKKRDRGGYLAGVVSVVCHEVPMDKGTS 226

Query: 54  E 52
           E
Sbjct: 227 E 227


>emb|CDP17425.1| unnamed protein product [Coffea canephora]
          Length = 162

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 40/74 (54%), Positives = 42/74 (56%)
 Frame = +2

Query: 2   ECNGIDGRGLPAAKSDDSLVPLSIGTSWHXXXXXXXXXXXLYLFLQPRGRTKEGK*KNGA 181
           ECNGIDGRGLPA KSDDSL                           PRGRTKE K +NGA
Sbjct: 2   ECNGIDGRGLPAPKSDDSL---------------------------PRGRTKERKERNGA 34

Query: 182 VLAREVDSKQQAAS 223
           V AREVDSKQQA +
Sbjct: 35  VKAREVDSKQQATA 48


Top