BLASTX nr result
ID: Cinnamomum23_contig00030829
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00030829
(516 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 162 1e-48
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 168 4e-48
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 167 5e-48
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 162 6e-47
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 158 8e-46
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 151 5e-44
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 142 1e-43
gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medic... 155 2e-43
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 149 1e-42
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 154 2e-42
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 155 2e-42
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 155 2e-42
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop... 139 4e-42
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum] 149 6e-42
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905... 155 7e-42
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 152 9e-42
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 152 9e-42
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 152 9e-42
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t... 147 1e-41
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 155 1e-41
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 162 bits (409), Expect(3) = 1e-48
Identities = 77/115 (66%), Positives = 91/115 (79%)
Frame = +1
Query: 1 KGYTQREGVNFNEVFSPVVKHSFIRVLLAVVPKLNLKLE*VDVKIAFLHGKLDEYIYMHQ 180
KG++Q+EG+++NEVFSPVVKH IRVLLA+V NL+L+ +DVK AFLHG L+E IYM Q
Sbjct: 985 KGFSQKEGIDYNEVFSPVVKHKSIRVLLAMVSVFNLELDQLDVKTAFLHGNLEEEIYMKQ 1044
Query: 181 PEGFEIHGKEDHVCLLKKSLYDLKPSPRQWYKRFDTFMVGNGYCRSVYDSCVYHK 345
PEGF K DHVC LKKSLY LK SPRQWYKRFD FMV + + R+ YDSCVY K
Sbjct: 1045 PEGFVDSEKSDHVCFLKKSLYGLKQSPRQWYKRFDAFMVSHEFMRNQYDSCVYFK 1099
Score = 43.1 bits (100), Expect(3) = 1e-48
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +2
Query: 434 NSEFEMKNLGATKKILGMEIRRDRKA 511
+SEFEMK+LGA KKILGMEI RDR A
Sbjct: 1134 SSEFEMKDLGAAKKILGMEIWRDRDA 1159
Score = 35.4 bits (80), Expect(3) = 1e-48
Identities = 20/32 (62%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = +3
Query: 333 CLSQKALKQ-SCIHLLLYVDDMLIAAKDMSEI 425
C+ K L S I+LLLYVDDMLIAAK+ +EI
Sbjct: 1095 CVYFKTLPDGSFIYLLLYVDDMLIAAKNRAEI 1126
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 168 bits (425), Expect(3) = 4e-48
Identities = 84/129 (65%), Positives = 100/129 (77%)
Frame = +1
Query: 1 KGYTQREGVNFNEVFSPVVKHSFIRVLLAVVPKLNLKLE*VDVKIAFLHGKLDEYIYMHQ 180
+G+TQREGV+FNE+FSPVVKHS IR+LLA+V L+L+LE +DVK AFLHG L+E I M Q
Sbjct: 885 RGFTQREGVDFNEIFSPVVKHSSIRILLAMVALLDLELEQMDVKTAFLHGNLEEQILMAQ 944
Query: 181 PEGFEIHGKEDHVCLLKKSLYDLKPSPRQWYKRFDTFMVGNGYCRSVYDSCVYHKKHSSN 360
PEGFE KED+VCLL KSLY LK SPRQWY+RFD FMV GY RS YDSCVY S+
Sbjct: 945 PEGFECKDKEDYVCLLHKSLYGLKQSPRQWYRRFDDFMVSKGYRRSRYDSCVYF--GGSD 1002
Query: 361 RVSICYYML 387
+ + Y +L
Sbjct: 1003 QGGVAYLLL 1011
Score = 39.7 bits (91), Expect(3) = 4e-48
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +2
Query: 437 SEFEMKNLGATKKILGMEIRRDRKAG 514
+EFEMK+LG K+ILGM+I RDR AG
Sbjct: 1035 AEFEMKDLGNAKRILGMDIIRDRSAG 1060
Score = 31.2 bits (69), Expect(3) = 4e-48
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 369 HLLLYVDDMLIAAKDMSEI 425
+LLLYVDDMLIA+K SEI
Sbjct: 1008 YLLLYVDDMLIASKYKSEI 1026
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 167 bits (424), Expect(3) = 5e-48
Identities = 77/116 (66%), Positives = 97/116 (83%)
Frame = +1
Query: 1 KGYTQREGVNFNEVFSPVVKHSFIRVLLAVVPKLNLKLE*VDVKIAFLHGKLDEYIYMHQ 180
+G+ QREGV++NE+FSPVV+H+ IRVLLA+V NL+LE +DVK AFLHG+L+E IYM Q
Sbjct: 862 RGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQ 921
Query: 181 PEGFEIHGKEDHVCLLKKSLYDLKPSPRQWYKRFDTFMVGNGYCRSVYDSCVYHKK 348
P+GF++ GKE+HVC LKKSLY LK SPRQWYKRFD++MV GY RS YD CVY+ +
Sbjct: 922 PDGFQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNR 977
Score = 40.0 bits (92), Expect(3) = 5e-48
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = +2
Query: 434 NSEFEMKNLGATKKILGMEIRRDRK 508
++EFEMK+LGA +KILGMEI RDR+
Sbjct: 1011 SAEFEMKDLGAARKILGMEIIRDRE 1035
Score = 30.8 bits (68), Expect(3) = 5e-48
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3
Query: 360 SCIHLLLYVDDMLIAAKDMSEI 425
S I+L+LYVDDMLIAAK +I
Sbjct: 982 SFIYLVLYVDDMLIAAKKKYDI 1003
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 162 bits (409), Expect(3) = 6e-47
Identities = 77/116 (66%), Positives = 94/116 (81%)
Frame = +1
Query: 1 KGYTQREGVNFNEVFSPVVKHSFIRVLLAVVPKLNLKLE*VDVKIAFLHGKLDEYIYMHQ 180
KG++QREGV++NE+FSPVV+H+ IRVLLA+V +L+LE +DVK AFLHG+L+E I M Q
Sbjct: 975 KGFSQREGVDYNEIFSPVVRHTSIRVLLAMVAHFDLELEQLDVKTAFLHGELEEDILMSQ 1034
Query: 181 PEGFEIHGKEDHVCLLKKSLYDLKPSPRQWYKRFDTFMVGNGYCRSVYDSCVYHKK 348
PEGF + GKE C LKKSLY LK SPRQWYKRFD+FMV +G+ RS YD CVYH K
Sbjct: 1035 PEGFVVPGKEKFACSLKKSLYGLKQSPRQWYKRFDSFMVEHGFDRSPYDCCVYHSK 1090
Score = 39.3 bits (90), Expect(3) = 6e-47
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +2
Query: 434 NSEFEMKNLGATKKILGMEIRRD 502
+SEF+MK+LGA KKILGMEI RD
Sbjct: 1124 SSEFDMKDLGAAKKILGMEIYRD 1146
Score = 33.9 bits (76), Expect(3) = 6e-47
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 360 SCIHLLLYVDDMLIAAKDMSEI 425
S I+LLLYVDDMLIAAK S++
Sbjct: 1095 SYIYLLLYVDDMLIAAKKKSDV 1116
>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 158 bits (400), Expect(3) = 8e-46
Identities = 75/116 (64%), Positives = 93/116 (80%)
Frame = +1
Query: 1 KGYTQREGVNFNEVFSPVVKHSFIRVLLAVVPKLNLKLE*VDVKIAFLHGKLDEYIYMHQ 180
K YTQREG++FNE+FSP+VKH+ IRVLLA+V NL+L +DV AFLHG+L+E I+M Q
Sbjct: 529 KAYTQREGMDFNEIFSPMVKHTSIRVLLALVSLWNLELXQMDVNRAFLHGELEEEIFMQQ 588
Query: 181 PEGFEIHGKEDHVCLLKKSLYDLKPSPRQWYKRFDTFMVGNGYCRSVYDSCVYHKK 348
P+GF + GKE+ VCLLK+SLY LK SPRQWYKRFD FM GY RS +D+CVY +K
Sbjct: 589 PKGFIVKGKENQVCLLKRSLYGLKQSPRQWYKRFDKFMTSVGYSRSKFDNCVYMRK 644
Score = 38.9 bits (89), Expect(3) = 8e-46
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +2
Query: 428 Q*NSEFEMKNLGATKKILGMEIRRDRKAG 514
Q SEFEMK+LG KKILG+E RDR G
Sbjct: 676 QLQSEFEMKDLGCAKKILGIEPYRDRSTG 704
Score = 33.9 bits (76), Expect(3) = 8e-46
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +3
Query: 342 QKALKQSCIHLLLYVDDMLIAAKDMSEI 425
+K S ++LLLYVDDML+A+K ++EI
Sbjct: 643 RKLTNGSYVYLLLYVDDMLLASKSITEI 670
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 151 bits (382), Expect(3) = 5e-44
Identities = 75/116 (64%), Positives = 89/116 (76%)
Frame = +1
Query: 1 KGYTQREGVNFNEVFSPVVKHSFIRVLLAVVPKLNLKLE*VDVKIAFLHGKLDEYIYMHQ 180
KG+TQ+EGV++NE+FSPVVKH IR LL++V N++L+ +DVK AFLHG L+E IYM Q
Sbjct: 887 KGFTQKEGVDYNEIFSPVVKHVSIRYLLSMVVHYNMELQQMDVKTAFLHGFLEEEIYMAQ 946
Query: 181 PEGFEIHGKEDHVCLLKKSLYDLKPSPRQWYKRFDTFMVGNGYCRSVYDSCVYHKK 348
PEGFEI + VCLLK+SLY LK SPRQW RFD FM G Y RS YDSCVY KK
Sbjct: 947 PEGFEIKRGSNKVCLLKRSLYGLKQSPRQWNLRFDEFMRGIKYTRSAYDSCVYFKK 1002
Score = 42.0 bits (97), Expect(3) = 5e-44
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +2
Query: 440 EFEMKNLGATKKILGMEIRRDRKAG 514
EFEMK+LG KKILGMEI RDR AG
Sbjct: 1038 EFEMKDLGDAKKILGMEISRDRDAG 1062
Score = 31.6 bits (70), Expect(3) = 5e-44
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3
Query: 366 IHLLLYVDDMLIAAKDMSEI 425
I+LLLYVDDMLIA+ + SE+
Sbjct: 1009 IYLLLYVDDMLIASANKSEV 1028
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 142 bits (359), Expect(3) = 1e-43
Identities = 70/103 (67%), Positives = 79/103 (76%)
Frame = +1
Query: 37 EVFSPVVKHSFIRVLLAVVPKLNLKLE*VDVKIAFLHGKLDEYIYMHQPEGFEIHGKEDH 216
+VFSPVVKH IRVLLA+V NL+L+ +DVK AFLHG L+E IYM QPEGF K DH
Sbjct: 1198 KVFSPVVKHKSIRVLLAMVSVFNLELDQLDVKTAFLHGNLEEEIYMKQPEGFVDSEKSDH 1257
Query: 217 VCLLKKSLYDLKPSPRQWYKRFDTFMVGNGYCRSVYDSCVYHK 345
VC LKKSLY LK SPRQWYKRFD FMV + + R+ YDSCVY K
Sbjct: 1258 VCFLKKSLYGLKQSPRQWYKRFDAFMVSHEFMRNQYDSCVYFK 1300
Score = 45.4 bits (106), Expect(3) = 1e-43
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +2
Query: 434 NSEFEMKNLGATKKILGMEIRRDRKAG 514
+SEFEMK+LGA KKILGMEI RDR AG
Sbjct: 1335 SSEFEMKDLGAAKKILGMEIWRDRDAG 1361
Score = 35.4 bits (80), Expect(3) = 1e-43
Identities = 20/32 (62%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = +3
Query: 333 CLSQKALKQ-SCIHLLLYVDDMLIAAKDMSEI 425
C+ K L S I+LLLYVDDMLIAAK+ +EI
Sbjct: 1296 CVYFKTLPDGSFIYLLLYVDDMLIAAKNRAEI 1327
>gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medicago truncatula]
Length = 624
Score = 155 bits (393), Expect(2) = 2e-43
Identities = 77/145 (53%), Positives = 102/145 (70%)
Frame = +1
Query: 1 KGYTQREGVNFNEVFSPVVKHSFIRVLLAVVPKLNLKLE*VDVKIAFLHGKLDEYIYMHQ 180
KG+ Q+EG++FNE+FSPVV+H+ IRVLLA V +L+LE +DVK AFLHG+L+E IYM Q
Sbjct: 236 KGFNQKEGIDFNEIFSPVVRHTSIRVLLAFVALFDLELEQLDVKTAFLHGELEEEIYMEQ 295
Query: 181 PEGFEIHGKEDHVCLLKKSLYDLKPSPRQWYKRFDTFMVGNGYCRSVYDSCVYHKKHSSN 360
+GF GKE VC LKKSLY LK +PRQWYKRF +FM+G YC+S YD C+Y + +
Sbjct: 296 SDGFIAPGKEHLVCRLKKSLYGLKQAPRQWYKRFHSFMIGQNYCKSQYDDCIYFQNFQNG 355
Query: 361 RVSICYYMLMTC*LLQRTCLRSAVK 435
S Y +L +L + +S +K
Sbjct: 356 --SFIYLLLYVDDMLIASRDKSLIK 378
Score = 46.6 bits (109), Expect(2) = 2e-43
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +2
Query: 434 NSEFEMKNLGATKKILGMEIRRDRKAG 514
++EF+MK LGA KKILGMEIRRDR+AG
Sbjct: 385 SNEFDMKELGAAKKILGMEIRRDRQAG 411
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 149 bits (377), Expect(3) = 1e-42
Identities = 69/113 (61%), Positives = 89/113 (78%)
Frame = +1
Query: 1 KGYTQREGVNFNEVFSPVVKHSFIRVLLAVVPKLNLKLE*VDVKIAFLHGKLDEYIYMHQ 180
KG++QREG+++ E+FSPVVKH IR LL++V + +++LE +DVK AFLHG LDEYI M Q
Sbjct: 894 KGFSQREGIDYQEIFSPVVKHVSIRYLLSIVVQFDMELEQLDVKTAFLHGNLDEYILMSQ 953
Query: 181 PEGFEIHGKEDHVCLLKKSLYDLKPSPRQWYKRFDTFMVGNGYCRSVYDSCVY 339
PEG+E + VCLLKKSLY LK SPRQW +RFD+FM+ +GY RS Y+ CVY
Sbjct: 954 PEGYEDEDSTEKVCLLKKSLYGLKQSPRQWNQRFDSFMINSGYQRSKYNPCVY 1006
Score = 40.0 bits (92), Expect(3) = 1e-42
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +2
Query: 434 NSEFEMKNLGATKKILGMEIRRDRKAG 514
N EFEMK+LG +KILGMEI R+R+ G
Sbjct: 1043 NREFEMKDLGPARKILGMEITRNREQG 1069
Score = 30.8 bits (68), Expect(3) = 1e-42
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +3
Query: 360 SCIHLLLYVDDMLIAAKDMSEI 425
S I+LLLYVDDMLIA+++ +I
Sbjct: 1014 SYIYLLLYVDDMLIASQNKDQI 1035
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 154 bits (390), Expect(2) = 2e-42
Identities = 73/128 (57%), Positives = 98/128 (76%)
Frame = +1
Query: 1 KGYTQREGVNFNEVFSPVVKHSFIRVLLAVVPKLNLKLE*VDVKIAFLHGKLDEYIYMHQ 180
KG++Q GV++N+VFSPVVKHS IR ++V +L+LE +DVK FLHG+L+E IYM Q
Sbjct: 877 KGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGELEEEIYMDQ 936
Query: 181 PEGFEIHGKEDHVCLLKKSLYDLKPSPRQWYKRFDTFMVGNGYCRSVYDSCVYHKKHSSN 360
PEGF + GKED+VC LK+SLY LK SPRQWYKRFD+FM+ +G+ RS +DSCVY K + +
Sbjct: 937 PEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKFVNGS 996
Query: 361 RVSICYYM 384
+ + Y+
Sbjct: 997 PIYLLLYV 1004
Score = 44.7 bits (104), Expect(2) = 2e-42
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +2
Query: 428 Q*NSEFEMKNLGATKKILGMEIRRDRKAG 514
Q +SEF+MK+LGA KKILGMEI RDR +G
Sbjct: 1023 QLSSEFDMKDLGAAKKILGMEITRDRNSG 1051
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 155 bits (393), Expect(2) = 2e-42
Identities = 74/128 (57%), Positives = 99/128 (77%)
Frame = +1
Query: 1 KGYTQREGVNFNEVFSPVVKHSFIRVLLAVVPKLNLKLE*VDVKIAFLHGKLDEYIYMHQ 180
KG++Q GV++N+VFSPVVKHS IR ++V +L+LE +DVK AFLHG+L+E IYM Q
Sbjct: 877 KGFSQIVGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQ 936
Query: 181 PEGFEIHGKEDHVCLLKKSLYDLKPSPRQWYKRFDTFMVGNGYCRSVYDSCVYHKKHSSN 360
PEGF + GKED+VC LK+SLY LK SPRQWYKRFD+FM+ +G+ RS +DSCVY K + +
Sbjct: 937 PEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKFVNGS 996
Query: 361 RVSICYYM 384
+ + Y+
Sbjct: 997 PIYLLLYV 1004
Score = 43.5 bits (101), Expect(2) = 2e-42
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +2
Query: 428 Q*NSEFEMKNLGATKKILGMEIRRDRKAG 514
Q +SEF+MK+LGA KKILGMEI RD+ +G
Sbjct: 1023 QLSSEFDMKDLGAAKKILGMEITRDKNSG 1051
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 155 bits (392), Expect(2) = 2e-42
Identities = 76/128 (59%), Positives = 96/128 (75%)
Frame = +1
Query: 1 KGYTQREGVNFNEVFSPVVKHSFIRVLLAVVPKLNLKLE*VDVKIAFLHGKLDEYIYMHQ 180
KGY+Q G++FN+VFSPVVKHS IR LL++V + +LE +DVK AFLHG+L+E IYM Q
Sbjct: 796 KGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQ 855
Query: 181 PEGFEIHGKEDHVCLLKKSLYDLKPSPRQWYKRFDTFMVGNGYCRSVYDSCVYHKKHSSN 360
PEGF + GKE+ VC LKKSLY LK SPRQWYKRFD+FM+ + RS YDSCVY K +
Sbjct: 856 PEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGS 915
Query: 361 RVSICYYM 384
+ + Y+
Sbjct: 916 AIYLLLYV 923
Score = 43.9 bits (102), Expect(2) = 2e-42
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +2
Query: 428 Q*NSEFEMKNLGATKKILGMEIRRDRKAG 514
Q +SEFEMK+LGA KKILGMEI R+R +G
Sbjct: 942 QLSSEFEMKDLGAAKKILGMEITRERHSG 970
>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1137
Score = 139 bits (350), Expect(3) = 4e-42
Identities = 68/119 (57%), Positives = 88/119 (73%)
Frame = +1
Query: 1 KGYTQREGVNFNEVFSPVVKHSFIRVLLAVVPKLNLKLE*VDVKIAFLHGKLDEYIYMHQ 180
KGY+Q+EG+++ E+FSPVVKH IR+LL++V +++L+ +DVK AFLHG LDE IY+ Q
Sbjct: 705 KGYSQKEGIDYQEIFSPVVKHVSIRLLLSMVTHCDMELQQMDVKTAFLHGYLDETIYIEQ 764
Query: 181 PEGFEIHGKEDHVCLLKKSLYDLKPSPRQWYKRFDTFMVGNGYCRSVYDSCVYHKKHSS 357
PEG+ D VCLLK+SLY L+ SPRQW RF+ FM GY RS YDSCVY K+ S
Sbjct: 765 PEGYVHKRYPDKVCLLKRSLYGLRQSPRQWNNRFNEFMQKIGYERSKYDSCVYFKELQS 823
Score = 47.4 bits (111), Expect(3) = 4e-42
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +2
Query: 434 NSEFEMKNLGATKKILGMEIRRDRKAG 514
NSEFEMK+LG KKILGMEI RDRKAG
Sbjct: 854 NSEFEMKDLGDAKKILGMEIVRDRKAG 880
Score = 32.3 bits (72), Expect(3) = 4e-42
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +3
Query: 366 IHLLLYVDDMLIAAKDMSEIC 428
I+LLLYVDD+LIA++D +C
Sbjct: 827 IYLLLYVDDILIASRDKRTVC 847
>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
Length = 687
Score = 149 bits (375), Expect(3) = 6e-42
Identities = 72/129 (55%), Positives = 95/129 (73%), Gaps = 1/129 (0%)
Frame = +1
Query: 1 KGYTQREGVNFNEVFSPVVKHSFIRVLLAVVPKLNLKLE*VDVKIAFLHGKLDEYIYMHQ 180
KG Q++G++F+E+F+PVVK + IR++L + LNL+LE +DVK AFLHG L E IYM Q
Sbjct: 241 KGCHQKKGIDFDEIFAPVVKMTSIRMILGLATCLNLELEQLDVKTAFLHGDLHEEIYMEQ 300
Query: 181 PEGFEIHGKEDHVCLLKKSLYDLKPSPRQWYKRFDTFMVGNGYCRSVYDSCVYHKKHS-S 357
PEGFE+ GKE+ VC LKKSLY LK +PRQWY +FD+FM N Y R+ D CVY +K S
Sbjct: 301 PEGFEVKGKENFVCKLKKSLYGLKQAPRQWYHKFDSFMSNNEYKRTTADPCVYFRKFSEG 360
Query: 358 NRVSICYYM 384
N + +C Y+
Sbjct: 361 NFIILCLYV 369
Score = 40.4 bits (93), Expect(3) = 6e-42
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +2
Query: 434 NSEFEMKNLGATKKILGMEIRRDRKAG 514
+ F+MK+LG K+ILGMEI RDRKAG
Sbjct: 390 SKSFDMKDLGPAKQILGMEIARDRKAG 416
Score = 28.9 bits (63), Expect(3) = 6e-42
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 366 IHLLLYVDDMLIAAKDMSEIC 428
I L LYVDDMLI +D+ IC
Sbjct: 363 IILCLYVDDMLIVGQDVEMIC 383
>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris subsp.
vulgaris]
Length = 2676
Score = 155 bits (392), Expect(2) = 7e-42
Identities = 78/127 (61%), Positives = 97/127 (76%)
Frame = +1
Query: 7 YTQREGVNFNEVFSPVVKHSFIRVLLAVVPKLNLKLE*VDVKIAFLHGKLDEYIYMHQPE 186
+TQ EGV+F+EVF PVVKHS IRVLLA+ +L+L +DVK AFLHG L+E IYM QP+
Sbjct: 741 FTQVEGVDFHEVFPPVVKHSSIRVLLALEAMEDLELHQLDVKTAFLHGDLEEEIYMKQPK 800
Query: 187 GFEIHGKEDHVCLLKKSLYDLKPSPRQWYKRFDTFMVGNGYCRSVYDSCVYHKKHSSNRV 366
GFE+ GKE+HVC L KSLY LK SPRQWY+RFD+FM+ + + RS YDSCVY+K+ S
Sbjct: 801 GFEVEGKEEHVCRLVKSLYGLKQSPRQWYRRFDSFMLAHEFTRSSYDSCVYYKELVSG-- 858
Query: 367 SICYYML 387
S Y +L
Sbjct: 859 SFIYLLL 865
Score = 42.0 bits (97), Expect(2) = 7e-42
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +2
Query: 434 NSEFEMKNLGATKKILGMEIRRDRKAG 514
NS F+MKNLG KKILGMEI RDR G
Sbjct: 888 NSGFDMKNLGEAKKILGMEIWRDRSKG 914
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 152 bits (383), Expect(2) = 9e-42
Identities = 73/128 (57%), Positives = 97/128 (75%)
Frame = +1
Query: 1 KGYTQREGVNFNEVFSPVVKHSFIRVLLAVVPKLNLKLE*VDVKIAFLHGKLDEYIYMHQ 180
+GY+Q GV++N+VFSPVVKHS IR L++V +L+LE +DVK AFLHG+L+E IYM Q
Sbjct: 888 RGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQ 947
Query: 181 PEGFEIHGKEDHVCLLKKSLYDLKPSPRQWYKRFDTFMVGNGYCRSVYDSCVYHKKHSSN 360
PEGF + GKE +VC LK+SLY LK SPRQW KRFD+FM+ + + RS YDSCVY K + +
Sbjct: 948 PEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHVNGS 1007
Query: 361 RVSICYYM 384
+ + Y+
Sbjct: 1008 PIYLLLYV 1015
Score = 45.1 bits (105), Expect(2) = 9e-42
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +2
Query: 434 NSEFEMKNLGATKKILGMEIRRDRKAG 514
+SEF+MK+LG+ KKILGMEI RDRK+G
Sbjct: 1036 SSEFDMKDLGSAKKILGMEISRDRKSG 1062
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 152 bits (383), Expect(2) = 9e-42
Identities = 73/128 (57%), Positives = 97/128 (75%)
Frame = +1
Query: 1 KGYTQREGVNFNEVFSPVVKHSFIRVLLAVVPKLNLKLE*VDVKIAFLHGKLDEYIYMHQ 180
+GY+Q GV++N+VFSPVVKHS IR L++V +L+LE +DVK AFLHG+L+E IYM Q
Sbjct: 890 RGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQ 949
Query: 181 PEGFEIHGKEDHVCLLKKSLYDLKPSPRQWYKRFDTFMVGNGYCRSVYDSCVYHKKHSSN 360
PEGF + GKE +VC LK+SLY LK SPRQW KRFD+FM+ + + RS YDSCVY K + +
Sbjct: 950 PEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHVNGS 1009
Query: 361 RVSICYYM 384
+ + Y+
Sbjct: 1010 PIYLLLYV 1017
Score = 45.1 bits (105), Expect(2) = 9e-42
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +2
Query: 434 NSEFEMKNLGATKKILGMEIRRDRKAG 514
+SEF+MK+LG+ KKILGMEI RDRK+G
Sbjct: 1038 SSEFDMKDLGSAKKILGMEISRDRKSG 1064
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 152 bits (383), Expect(2) = 9e-42
Identities = 73/128 (57%), Positives = 97/128 (75%)
Frame = +1
Query: 1 KGYTQREGVNFNEVFSPVVKHSFIRVLLAVVPKLNLKLE*VDVKIAFLHGKLDEYIYMHQ 180
+GY+Q GV++N+VFSPVVKHS IR L++V +L+LE +DVK AFLHG+L+E IYM Q
Sbjct: 888 RGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQ 947
Query: 181 PEGFEIHGKEDHVCLLKKSLYDLKPSPRQWYKRFDTFMVGNGYCRSVYDSCVYHKKHSSN 360
PEGF + GKE +VC LK+SLY LK SPRQW KRFD+FM+ + + RS YDSCVY K + +
Sbjct: 948 PEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHVNGS 1007
Query: 361 RVSICYYM 384
+ + Y+
Sbjct: 1008 PIYLLLYV 1015
Score = 45.1 bits (105), Expect(2) = 9e-42
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +2
Query: 434 NSEFEMKNLGATKKILGMEIRRDRKAG 514
+SEF+MK+LG+ KKILGMEI RDRK+G
Sbjct: 1036 SSEFDMKDLGSAKKILGMEISRDRKSG 1062
>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
reverse transcriptase [Arabidopsis thaliana]
Length = 587
Score = 147 bits (371), Expect(3) = 1e-41
Identities = 69/116 (59%), Positives = 91/116 (78%)
Frame = +1
Query: 1 KGYTQREGVNFNEVFSPVVKHSFIRVLLAVVPKLNLKLE*VDVKIAFLHGKLDEYIYMHQ 180
KGYTQREGV++ E+F+PVVKH+FIR+L++VV +L+LE +DVK AFLHG+L+E +YM Q
Sbjct: 141 KGYTQREGVDYQEIFAPVVKHTFIRILMSVVVDQDLELEQMDVKTAFLHGELEEELYMEQ 200
Query: 181 PEGFEIHGKEDHVCLLKKSLYDLKPSPRQWYKRFDTFMVGNGYCRSVYDSCVYHKK 348
PEGF ++ VCLLKK LY LK SPRQW KRF+ FM+ + RS +D+CVY K+
Sbjct: 201 PEGFISEDGKNKVCLLKKLLYGLKQSPRQWNKRFNRFMIDQNFIRSEHDACVYVKQ 256
Score = 35.4 bits (80), Expect(3) = 1e-41
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2
Query: 428 Q*NSEFEMKNLGATKKILGMEIRRDRKAG 514
Q + EFEMK++G +ILG++I RDRK G
Sbjct: 288 QLSMEFEMKDMGPASRILGIDIIRDRKNG 316
Score = 34.7 bits (78), Expect(3) = 1e-41
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +3
Query: 342 QKALKQSCIHLLLYVDDMLIAAKDMSEI 425
++ +Q ++LLLYVDDMLIA K+ SEI
Sbjct: 255 KQVTEQEHLYLLLYVDDMLIAGKNKSEI 282
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 155 bits (391), Expect(2) = 1e-41
Identities = 75/128 (58%), Positives = 96/128 (75%)
Frame = +1
Query: 1 KGYTQREGVNFNEVFSPVVKHSFIRVLLAVVPKLNLKLE*VDVKIAFLHGKLDEYIYMHQ 180
KGY+Q G++FN++FSPVVKHS IR LL++V + +LE +DVK AFLHG+L+E IYM Q
Sbjct: 813 KGYSQIPGIDFNDIFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQ 872
Query: 181 PEGFEIHGKEDHVCLLKKSLYDLKPSPRQWYKRFDTFMVGNGYCRSVYDSCVYHKKHSSN 360
PEGF + GKE+ VC LKKSLY LK SPRQWYKRFD+FM+ + RS YDSCVY K +
Sbjct: 873 PEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGS 932
Query: 361 RVSICYYM 384
+ + Y+
Sbjct: 933 AIYLLLYV 940
Score = 41.6 bits (96), Expect(2) = 1e-41
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +2
Query: 428 Q*NSEFEMKNLGATKKILGMEIRRDR 505
Q +SEFEMK+LGA KKILGMEI R+R
Sbjct: 959 QLSSEFEMKDLGAAKKILGMEITRER 984