BLASTX nr result
ID: Cinnamomum23_contig00030711
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00030711
(1133 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI33284.3| unnamed protein product [Vitis vinifera] 239 2e-60
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s... 239 2e-60
ref|XP_010647482.1| PREDICTED: DNA-directed RNA polymerase III s... 239 2e-60
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s... 239 3e-60
ref|XP_007139345.1| hypothetical protein PHAVU_008G021700g [Phas... 238 8e-60
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p... 235 4e-59
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s... 234 1e-58
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s... 231 7e-58
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr... 231 7e-58
ref|XP_012073203.1| PREDICTED: DNA-directed RNA polymerase III s... 230 2e-57
emb|CDP07151.1| unnamed protein product [Coffea canephora] 227 1e-56
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s... 227 1e-56
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s... 227 1e-56
ref|XP_011003010.1| PREDICTED: DNA-directed RNA polymerase III s... 226 3e-56
ref|XP_011003009.1| PREDICTED: DNA-directed RNA polymerase III s... 226 3e-56
ref|XP_008218752.1| PREDICTED: DNA-directed RNA polymerase III s... 226 3e-56
gb|KDO80021.1| hypothetical protein CISIN_1g0254932mg, partial [... 226 3e-56
ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III s... 225 4e-56
ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Popu... 225 5e-56
ref|XP_007208807.1| hypothetical protein PRUPE_ppa024742mg [Prun... 225 5e-56
>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
Length = 300
Score = 239 bits (611), Expect = 2e-60
Identities = 123/230 (53%), Positives = 155/230 (67%), Gaps = 5/230 (2%)
Frame = -3
Query: 1080 KRGRPSSSAASQKLSDVEQDVYNLIRSKEGMGIFVGDLKRELKLQDAIVKKSLKVLESQK 901
KR RP ++ ASQ L D E+ +Y+LIRSKE MGI+ D+KRE L D +V KSLK L+ +K
Sbjct: 71 KRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQVKK 130
Query: 900 LIKGVNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVV 721
LIK V ++ K KHYMAVEFE SKE+TGG+WYVEG LD E+ +V
Sbjct: 131 LIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCVRVLSKLKVA 190
Query: 720 TIEGLFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHR 541
T EG+ + + ++G E S+ QI EIL+ALVLDNEI EV+S+G G FSS+P+G VCY
Sbjct: 191 TAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCYRC 250
Query: 540 LTRRNL-----TTGILSSIPCGVCPRIRECTPDGIISPINCVYFKKWLDF 406
+ L T G ++SIPCGVCPRI +CTPDGIISP C Y+ KWLDF
Sbjct: 251 TNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 300
>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 239 bits (611), Expect = 2e-60
Identities = 123/230 (53%), Positives = 155/230 (67%), Gaps = 5/230 (2%)
Frame = -3
Query: 1080 KRGRPSSSAASQKLSDVEQDVYNLIRSKEGMGIFVGDLKRELKLQDAIVKKSLKVLESQK 901
KR RP ++ ASQ L D E+ +Y+LIRSKE MGI+ D+KRE L D +V KSLK L+ +K
Sbjct: 10 KRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQVKK 69
Query: 900 LIKGVNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVV 721
LIK V ++ K KHYMAVEFE SKE+TGG+WYVEG LD E+ +V
Sbjct: 70 LIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVRVLSKLKVA 129
Query: 720 TIEGLFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHR 541
T EG+ + + ++G E S+ QI EIL+ALVLDNEI EV+S+G G FSS+P+G VCY
Sbjct: 130 TAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCYRC 189
Query: 540 LTRRNL-----TTGILSSIPCGVCPRIRECTPDGIISPINCVYFKKWLDF 406
+ L T G ++SIPCGVCPRI +CTPDGIISP C Y+ KWLDF
Sbjct: 190 TNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239
>ref|XP_010647482.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 239 bits (611), Expect = 2e-60
Identities = 123/230 (53%), Positives = 155/230 (67%), Gaps = 5/230 (2%)
Frame = -3
Query: 1080 KRGRPSSSAASQKLSDVEQDVYNLIRSKEGMGIFVGDLKRELKLQDAIVKKSLKVLESQK 901
KR RP ++ ASQ L D E+ +Y+LIRSKE MGI+ D+KRE L D +V KSLK L+ +K
Sbjct: 10 KRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQVKK 69
Query: 900 LIKGVNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVV 721
LIK V ++ K KHYMAVEFE SKE+TGG+WYVEG LD E+ +V
Sbjct: 70 LIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCVRVLSKLKVA 129
Query: 720 TIEGLFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHR 541
T EG+ + + ++G E S+ QI EIL+ALVLDNEI EV+S+G G FSS+P+G VCY
Sbjct: 130 TAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCYRC 189
Query: 540 LTRRNL-----TTGILSSIPCGVCPRIRECTPDGIISPINCVYFKKWLDF 406
+ L T G ++SIPCGVCPRI +CTPDGIISP C Y+ KWLDF
Sbjct: 190 TNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239
>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera] gi|731402737|ref|XP_010654780.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera] gi|731402739|ref|XP_010654781.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 239 bits (610), Expect = 3e-60
Identities = 123/230 (53%), Positives = 156/230 (67%), Gaps = 5/230 (2%)
Frame = -3
Query: 1080 KRGRPSSSAASQKLSDVEQDVYNLIRSKEGMGIFVGDLKRELKLQDAIVKKSLKVLESQK 901
KR RP ++AASQ L D E+ +Y+LIRSKE MGI+ D+KRE L D +V KSLK L+ +K
Sbjct: 10 KRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQVKK 69
Query: 900 LIKGVNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVV 721
LIK V ++ K KHYMAVEFE SKE+TGG+WYVEG LD E+ +V
Sbjct: 70 LIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVKVLSKLKVA 129
Query: 720 TIEGLFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHR 541
T EG+ + + ++G E S+ QI EIL+ALVLDNEI EV+S+G G FSS+P+G VCY
Sbjct: 130 TAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCYRC 189
Query: 540 LTRRNL-----TTGILSSIPCGVCPRIRECTPDGIISPINCVYFKKWLDF 406
+ L G ++SIPCGVCPRI +CTPDGIISP +C Y+ KWLDF
Sbjct: 190 TNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYAKWLDF 239
>ref|XP_007139345.1| hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
gi|561012478|gb|ESW11339.1| hypothetical protein
PHAVU_008G021700g [Phaseolus vulgaris]
Length = 239
Score = 238 bits (606), Expect = 8e-60
Identities = 122/229 (53%), Positives = 158/229 (68%), Gaps = 4/229 (1%)
Frame = -3
Query: 1080 KRGRPSSSAASQKLSDVEQDVYNLIRSKEGMGIFVGDLKRELKLQDAIVKKSLKVLESQK 901
KR R + S ++D E+ +YNLI SK+ MGI+ GD+KRE L D+IVKKSLK+L+S+
Sbjct: 11 KRKRQDLALVSGSMTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSLKLLQSKN 70
Query: 900 LIKGVNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVV 721
LIK V ++ +K KHYMA EFE SKEITGG WY +G LD +F +V
Sbjct: 71 LIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTDFINLVKEVCLKCIFRQKVA 130
Query: 720 TIEGLFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHR 541
T +G+ ++ R+SG F EV++ QI EIL+ALVLD+EIEEVKSTG G FSS+P+G++CY
Sbjct: 131 THDGVLEWSRKSGVFTVEVTAQQIDEILRALVLDDEIEEVKSTGLGDFSSVPVGRICYRC 190
Query: 540 LT----RRNLTTGILSSIPCGVCPRIRECTPDGIISPINCVYFKKWLDF 406
+ R G ++SIPCGVCPRI CTPDGIISP CVY++KWLDF
Sbjct: 191 KSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF 239
>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
polymerase III subunit F, putative [Ricinus communis]
Length = 236
Score = 235 bits (600), Expect = 4e-59
Identities = 121/229 (52%), Positives = 156/229 (68%), Gaps = 4/229 (1%)
Frame = -3
Query: 1080 KRGRPSSSAASQKLSDVEQDVYNLIRSKEGMGIFVGDLKRELKLQDAIVKKSLKVLESQK 901
KR +P SS+ +Q L++ E +YN+I SK+ MGI+ D+KRE L D +V KSLKVL+++
Sbjct: 8 KRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRETNLPDNVVNKSLKVLQAKN 67
Query: 900 LIKGVNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVV 721
LIK V ++ +K KHYMA EFE SKEITGG+WYVEG LD EF +V
Sbjct: 68 LIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVCTKQVLKLKVA 127
Query: 720 TIEGLFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHR 541
T+EG+ D ++RSG FN E++ QI EI++ALVLDN + EVKS G FS +P+GKVCY
Sbjct: 128 TLEGITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNGMLEFSFIPIGKVCYKC 187
Query: 540 L----TRRNLTTGILSSIPCGVCPRIRECTPDGIISPINCVYFKKWLDF 406
+ T G ++SIPCGVCPRI +CTPDGIISP CVY+ KWLDF
Sbjct: 188 VGKGSTAGEPRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKWLDF 236
>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Glycine
max] gi|734354912|gb|KHN13797.1| DNA-directed RNA
polymerase III subunit RPC6 [Glycine soja]
Length = 239
Score = 234 bits (596), Expect = 1e-58
Identities = 121/229 (52%), Positives = 158/229 (68%), Gaps = 4/229 (1%)
Frame = -3
Query: 1080 KRGRPSSSAASQKLSDVEQDVYNLIRSKEGMGIFVGDLKRELKLQDAIVKKSLKVLESQK 901
KR R + + L+D E+ +YNLI SK+ MGI+ GD+KRE L D+IVKKSLK+L+S+
Sbjct: 11 KRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSLKLLQSKN 70
Query: 900 LIKGVNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVV 721
LIK V ++ +K KHYMA EFE SKEITGG WY +G+LD +F +V
Sbjct: 71 LIKEVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVCLKYIFRQKVA 130
Query: 720 TIEGLFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHR 541
T +G+ ++ R+SG FN EV++ QI EIL+ LVLD+EI EVKSTG G FSS+P+G++CY
Sbjct: 131 TRDGVMEWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSSVPVGRICYRC 190
Query: 540 LT----RRNLTTGILSSIPCGVCPRIRECTPDGIISPINCVYFKKWLDF 406
+ R G ++SIPCGVCPRI CTPDGIISP CVY++KWLDF
Sbjct: 191 KSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF 239
>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Citrus
sinensis]
Length = 233
Score = 231 bits (589), Expect = 7e-58
Identities = 119/231 (51%), Positives = 159/231 (68%), Gaps = 6/231 (2%)
Frame = -3
Query: 1080 KRGRPSSSAASQKLSDVEQDVYNLIRSKEGMGIFVGDLKRELK--LQDAIVKKSLKVLES 907
KR RP S+A S L+D E+ +Y++IRSK+ MGI+ D+KREL+ L D IV KS+K L++
Sbjct: 3 KRKRPESNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 906 QKLIKGVNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXE 727
+ LIK V ++H K KH MAVEFE SKEI+GG+WY EG LD EF +
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 726 VVTIEGLFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCY 547
V T+EG+ D ++RSG F +++ QI EI++ALVLDN+I EVKS G G F+++P+GKVCY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 546 HRLTR----RNLTTGILSSIPCGVCPRIRECTPDGIISPINCVYFKKWLDF 406
+++ TG L+SIPCGVCP+I CTPDG+ISP CVY+ WLDF
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICTPDGVISPKTCVYYTTWLDF 233
>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
gi|557529238|gb|ESR40488.1| hypothetical protein
CICLE_v10026399mg [Citrus clementina]
gi|641825965|gb|KDO45213.1| hypothetical protein
CISIN_1g026766mg [Citrus sinensis]
gi|641825966|gb|KDO45214.1| hypothetical protein
CISIN_1g026766mg [Citrus sinensis]
Length = 233
Score = 231 bits (589), Expect = 7e-58
Identities = 119/231 (51%), Positives = 159/231 (68%), Gaps = 6/231 (2%)
Frame = -3
Query: 1080 KRGRPSSSAASQKLSDVEQDVYNLIRSKEGMGIFVGDLKRELK--LQDAIVKKSLKVLES 907
KR RP S+A S L+D E+ +Y++IRSK+ MGI+ D+KREL+ L D IV KS+K L++
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 906 QKLIKGVNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXE 727
+ LIK V ++H K KH MAVEFE SKEI+GG+WY EG LD EF +
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 726 VVTIEGLFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCY 547
V T+EG+ D ++RSG F +++ QI EI++ALVLDN+I EVKS G G F+++P+GKVCY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 546 HRLTR----RNLTTGILSSIPCGVCPRIRECTPDGIISPINCVYFKKWLDF 406
+++ TG L+SIPCGVCP+I C PDG+ISP CVY+ KWLDF
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICKPDGVISPKTCVYYTKWLDF 233
>ref|XP_012073203.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Jatropha
curcas] gi|317106726|dbj|BAJ53222.1| JHL06P13.1 [Jatropha
curcas] gi|643729216|gb|KDP37096.1| hypothetical protein
JCGZ_06152 [Jatropha curcas]
Length = 235
Score = 230 bits (586), Expect = 2e-57
Identities = 114/228 (50%), Positives = 157/228 (68%), Gaps = 3/228 (1%)
Frame = -3
Query: 1080 KRGRPSSSAASQKLSDVEQDVYNLIRSKEGMGIFVGDLKRELKLQDAIVKKSLKVLESQK 901
KR +P S++++Q L++ EQ +YN IRSK+ MGI+ D+KRE L D +V KSLKVL+++
Sbjct: 8 KRKQPESNSSAQSLTEHEQALYNAIRSKQDMGIWTRDMKRETNLPDTVVNKSLKVLQAKN 67
Query: 900 LIKGVNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVV 721
LIK V ++ +K K+YMA EFE SKEITGG+WYVEG LD F +V
Sbjct: 68 LIKEVVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIGVLKDQCKKQIEKLKVA 127
Query: 720 TIEGLFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHR 541
T+E + D++ R+G ++ QI EIL+ALVLDN++ EVKS G G F+S+P+GKVCY
Sbjct: 128 TVEAVTDFINRTGVSTVHLTKQQIEEILKALVLDNKVTEVKSNGMGEFASIPVGKVCYKS 187
Query: 540 LTRRNL---TTGILSSIPCGVCPRIRECTPDGIISPINCVYFKKWLDF 406
+ + + G ++SIPCGVCPRI+ CTP+GIISP CVY+ KWL+F
Sbjct: 188 IGKGSSGDPKIGAMASIPCGVCPRIKHCTPNGIISPQTCVYYGKWLEF 235
>emb|CDP07151.1| unnamed protein product [Coffea canephora]
Length = 334
Score = 227 bits (578), Expect = 1e-56
Identities = 114/245 (46%), Positives = 162/245 (66%), Gaps = 5/245 (2%)
Frame = -3
Query: 1125 SIYLDMGRPPSNLPPKRGRPSSSAASQKLSDVEQDVYNLIRSKEGMGIFVGDLKRELKLQ 946
S M R + KR RP SS+A+ L D ++ V+N+I+SKE MGI+ D+K E KL
Sbjct: 91 SFVFRMSRSMNASSLKRKRPESSSANGSLVDADRAVFNVIKSKEDMGIWTRDIKFETKLA 150
Query: 945 DAIVKKSLKVLESQKLIKGVNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXX 766
D +V KSLK L S+KLIK + ++ +K KHYMA EFE SKE+TGG+WYV+G LD E
Sbjct: 151 DTVVNKSLKSLLSKKLIKEIVNIKNKGRKHYMAAEFEPSKEVTGGAWYVDGNLDKELIGV 210
Query: 765 XXXXXXXXXXXXEVVTIEGLFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGK 586
+V T+EG++D++ +S + ++ QI E+L ++VLDNE+ EVKSTG
Sbjct: 211 LKGLCLKIINSKKVATVEGVYDFLTKSKVTTFDCTNQQIAEVLNSMVLDNEVIEVKSTGL 270
Query: 585 GVFSSMPLGKVCYHRLTR-----RNLTTGILSSIPCGVCPRIRECTPDGIISPINCVYFK 421
G + S+P+G VCY R+ + +L G ++SIPCG+CPRI +CTPDG+ISP CVY++
Sbjct: 271 GEYHSIPIGTVCY-RIAKGAGLGESLKIGAMASIPCGMCPRISQCTPDGVISPSTCVYYQ 329
Query: 420 KWLDF 406
KW++F
Sbjct: 330 KWMNF 334
>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like isoform
X2 [Citrus sinensis]
Length = 234
Score = 227 bits (578), Expect = 1e-56
Identities = 118/232 (50%), Positives = 160/232 (68%), Gaps = 7/232 (3%)
Frame = -3
Query: 1080 KRGRPSSSAASQKLSDVEQDVYNLIRS-KEGMGIFVGDLKRELK--LQDAIVKKSLKVLE 910
KR RP S+A S L+D E+ +Y++IRS K+ MGI+ D+KRELK L D IV KS+K L+
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 62
Query: 909 SQKLIKGVNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXX 730
++ LIK V ++H+K KH MAVEFE SKEI+GG+WY EG LD EF
Sbjct: 63 NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 122
Query: 729 EVVTIEGLFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVC 550
+V T+EG+ D ++RSG F +++ QI EI++A+VLDN+I EVKS G G F+++P+GKVC
Sbjct: 123 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 182
Query: 549 YHRLTR----RNLTTGILSSIPCGVCPRIRECTPDGIISPINCVYFKKWLDF 406
Y +++ TG +S+PCGVCP+I CTPDG+ISP CVY+ KWLDF
Sbjct: 183 YKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWLDF 234
>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like isoform
X1 [Citrus sinensis]
Length = 252
Score = 227 bits (578), Expect = 1e-56
Identities = 118/232 (50%), Positives = 160/232 (68%), Gaps = 7/232 (3%)
Frame = -3
Query: 1080 KRGRPSSSAASQKLSDVEQDVYNLIRS-KEGMGIFVGDLKRELK--LQDAIVKKSLKVLE 910
KR RP S+A S L+D E+ +Y++IRS K+ MGI+ D+KRELK L D IV KS+K L+
Sbjct: 21 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 80
Query: 909 SQKLIKGVNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXX 730
++ LIK V ++H+K KH MAVEFE SKEI+GG+WY EG LD EF
Sbjct: 81 NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 140
Query: 729 EVVTIEGLFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVC 550
+V T+EG+ D ++RSG F +++ QI EI++A+VLDN+I EVKS G G F+++P+GKVC
Sbjct: 141 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 200
Query: 549 YHRLTR----RNLTTGILSSIPCGVCPRIRECTPDGIISPINCVYFKKWLDF 406
Y +++ TG +S+PCGVCP+I CTPDG+ISP CVY+ KWLDF
Sbjct: 201 YKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWLDF 252
>ref|XP_011003010.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like isoform
X2 [Populus euphratica]
Length = 258
Score = 226 bits (575), Expect = 3e-56
Identities = 116/235 (49%), Positives = 158/235 (67%), Gaps = 4/235 (1%)
Frame = -3
Query: 1098 PSNLPPKRGRPSSSAASQKLSDVEQDVYNLIRSKEGMGIFVGDLKRELKLQDAIVKKSLK 919
PS+L KR RP ++ +Q L++ E+ +Y++IRSK+ +GI+ D+K+E KL D +V KSLK
Sbjct: 26 PSSL--KRKRPEVNSPAQSLNEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVVNKSLK 83
Query: 918 VLESQKLIKGVNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXX 739
L+ +KLIK V ++ +K KH+MA EFE SKEI+GG+WY+EG LD EF
Sbjct: 84 ALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQLCKRQI 143
Query: 738 XXXEVVTIEGLFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLG 559
V T+E + D + FN +V+ QI EIL+ L+LDN I EVKS G G F+S+P G
Sbjct: 144 ERSGVATLEAVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEFASIPFG 203
Query: 558 KVCYHRLTRRNL----TTGILSSIPCGVCPRIRECTPDGIISPINCVYFKKWLDF 406
+VCY +++ L G L+SIPCGVCPRI +CTPDGIISP CVY++KWLDF
Sbjct: 204 EVCYKYVSKGGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQKWLDF 258
>ref|XP_011003009.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like isoform
X1 [Populus euphratica]
Length = 239
Score = 226 bits (575), Expect = 3e-56
Identities = 116/235 (49%), Positives = 158/235 (67%), Gaps = 4/235 (1%)
Frame = -3
Query: 1098 PSNLPPKRGRPSSSAASQKLSDVEQDVYNLIRSKEGMGIFVGDLKRELKLQDAIVKKSLK 919
PS+L KR RP ++ +Q L++ E+ +Y++IRSK+ +GI+ D+K+E KL D +V KSLK
Sbjct: 7 PSSL--KRKRPEVNSPAQSLNEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVVNKSLK 64
Query: 918 VLESQKLIKGVNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXX 739
L+ +KLIK V ++ +K KH+MA EFE SKEI+GG+WY+EG LD EF
Sbjct: 65 ALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQLCKRQI 124
Query: 738 XXXEVVTIEGLFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLG 559
V T+E + D + FN +V+ QI EIL+ L+LDN I EVKS G G F+S+P G
Sbjct: 125 ERSGVATLEAVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEFASIPFG 184
Query: 558 KVCYHRLTRRNL----TTGILSSIPCGVCPRIRECTPDGIISPINCVYFKKWLDF 406
+VCY +++ L G L+SIPCGVCPRI +CTPDGIISP CVY++KWLDF
Sbjct: 185 EVCYKYVSKGGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQKWLDF 239
>ref|XP_008218752.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Prunus
mume]
Length = 236
Score = 226 bits (575), Expect = 3e-56
Identities = 116/229 (50%), Positives = 150/229 (65%), Gaps = 4/229 (1%)
Frame = -3
Query: 1080 KRGRPSSSAASQKLSDVEQDVYNLIRSKEGMGIFVGDLKRELKLQDAIVKKSLKVLESQK 901
KR +P S++ S+ L++ E+ +YN+IRSK+ MGI+ D+K+E L D +V KS+K L+++
Sbjct: 8 KRKQPDSNSPSESLTEHEKIIYNVIRSKQDMGIWTRDMKKEANLPDNLVGKSIKSLQAKN 67
Query: 900 LIKGVNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVV 721
LIK V +V K KHYMA EFE SKE+TGG WY G LD + +V
Sbjct: 68 LIKEVVNVQSKGRKHYMASEFEPSKELTGGDWYSNGTLDKYYITCVKDGFAKIIYQLKVA 127
Query: 720 TIEGLFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHR 541
T+EG+ D V++SG F + QI EIL+ LVLD I EVKSTG G F+S P+GKVCY
Sbjct: 128 TLEGISDEVKKSGIFKTSFTRPQIEEILRVLVLDKRITEVKSTGMGEFASFPVGKVCYKS 187
Query: 540 L----TRRNLTTGILSSIPCGVCPRIRECTPDGIISPINCVYFKKWLDF 406
T+R G ++SIPCGVCPRI +CTPDGIISP CVYF KWLDF
Sbjct: 188 TSKGGTKREPKVGAMASIPCGVCPRISQCTPDGIISPRTCVYFTKWLDF 236
>gb|KDO80021.1| hypothetical protein CISIN_1g0254932mg, partial [Citrus sinensis]
Length = 234
Score = 226 bits (575), Expect = 3e-56
Identities = 117/232 (50%), Positives = 160/232 (68%), Gaps = 7/232 (3%)
Frame = -3
Query: 1080 KRGRPSSSAASQKLSDVEQDVYNLIRS-KEGMGIFVGDLKRELK--LQDAIVKKSLKVLE 910
KR RP S+A S L+D E+ +Y++IRS K+ MGI+ D+KRELK L D IV KS+K L+
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 62
Query: 909 SQKLIKGVNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXX 730
++ LIK V ++H+K KH MAVEFE SK+I+GG+WY EG LD EF
Sbjct: 63 NKSLIKEVVNIHNKGKKHLMAVEFEPSKDISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 122
Query: 729 EVVTIEGLFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVC 550
+V T+EG+ D ++RSG F +++ QI EI++A+VLDN+I EVKS G G F+++P+GKVC
Sbjct: 123 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 182
Query: 549 YHRLTR----RNLTTGILSSIPCGVCPRIRECTPDGIISPINCVYFKKWLDF 406
Y +++ TG +S+PCGVCP+I CTPDG+ISP CVY+ KWLDF
Sbjct: 183 YKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWLDF 234
>ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis] gi|743806633|ref|XP_010927733.1| PREDICTED:
DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis] gi|743806635|ref|XP_010927734.1| PREDICTED:
DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis] gi|743806637|ref|XP_010927735.1| PREDICTED:
DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
Length = 237
Score = 225 bits (574), Expect = 4e-56
Identities = 116/229 (50%), Positives = 149/229 (65%), Gaps = 1/229 (0%)
Frame = -3
Query: 1095 SNLPPKRGRPSSSAASQKLSDVEQDVYNLIRSKEGMGIFVGDLKRELKLQDAIVKKSLKV 916
S LP KR P S LS+ E+ +Y LIRSK+ +GI+ D+KRE LQ +V K+LK
Sbjct: 5 SMLPQKRPHPDSKPKLPALSETERILYELIRSKQNIGIWTADMKRETGLQTTVVTKTLKS 64
Query: 915 LESQKLIKGVNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXX 736
L+++ LIK V ++H+K K YMA+EFE SKEI+GGSWY +G LD EF
Sbjct: 65 LQNKNLIKDVVNIHNKARKIYMAMEFEPSKEISGGSWYSDGSLDIEFIRILREQCLKHIE 124
Query: 735 XXEVVTIEGLFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGK 556
++ T+E ++ ++ S F E + QI+EI+ A+VLD EIEE+KSTG G FS +P GK
Sbjct: 125 RLQIATMEAIYKSIQESRVFKVECTMQQIVEIVNAMVLDKEIEELKSTGIGDFSKVPSGK 184
Query: 555 VCYHRLT-RRNLTTGILSSIPCGVCPRIRECTPDGIISPINCVYFKKWL 412
+CY L R G LSSIPCGVCPRI ECTPDGIISP CVY+ KWL
Sbjct: 185 ICYKSLKGREGPKIGALSSIPCGVCPRIGECTPDGIISPKTCVYYNKWL 233
>ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
gi|222866141|gb|EEF03272.1| hypothetical protein
POPTR_0018s04220g [Populus trichocarpa]
Length = 239
Score = 225 bits (573), Expect = 5e-56
Identities = 116/235 (49%), Positives = 158/235 (67%), Gaps = 4/235 (1%)
Frame = -3
Query: 1098 PSNLPPKRGRPSSSAASQKLSDVEQDVYNLIRSKEGMGIFVGDLKRELKLQDAIVKKSLK 919
PS+L KR RP ++ +Q L++ E+ +Y++IRSK+ +GI+ D+K+E KL D +V KSLK
Sbjct: 7 PSSL--KRKRPEVNSPAQSLTEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVVNKSLK 64
Query: 918 VLESQKLIKGVNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXX 739
L+ +KLIK V ++ +K KH+MA EFE SKEI+GG+WY+EG LD EF
Sbjct: 65 ALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQLCKRQI 124
Query: 738 XXXEVVTIEGLFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLG 559
V T+E + D + FN +V+ QI EIL+ L+LDN I EVKS G G F+S+P G
Sbjct: 125 ERRGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEFASIPFG 184
Query: 558 KVCYHRLTRRNL----TTGILSSIPCGVCPRIRECTPDGIISPINCVYFKKWLDF 406
+VCY +++ L G L+SIPCGVCPRI +CTPDGIISP CVY++KWLDF
Sbjct: 185 EVCYKYISKVGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQKWLDF 239
>ref|XP_007208807.1| hypothetical protein PRUPE_ppa024742mg [Prunus persica]
gi|462404542|gb|EMJ10006.1| hypothetical protein
PRUPE_ppa024742mg [Prunus persica]
Length = 236
Score = 225 bits (573), Expect = 5e-56
Identities = 115/229 (50%), Positives = 149/229 (65%), Gaps = 4/229 (1%)
Frame = -3
Query: 1080 KRGRPSSSAASQKLSDVEQDVYNLIRSKEGMGIFVGDLKRELKLQDAIVKKSLKVLESQK 901
KR +P SS+ S+ L++ E+ VY++IRSK+ MGI+ D+K+E L D +V KS+K L+++
Sbjct: 8 KRKQPDSSSPSESLTEHEKIVYSVIRSKQDMGIWTRDMKKEANLPDNLVGKSIKSLQAKN 67
Query: 900 LIKGVNDVHHKLNKHYMAVEFEASKEITGGSWYVEGKLDAEFXXXXXXXXXXXXXXXEVV 721
LIK V +V K KHYMA EFE SKE+TGG WY G LD + +V
Sbjct: 68 LIKEVVNVQSKGRKHYMAAEFEPSKELTGGDWYSNGTLDKYYISCVKDGFAKIIYQLKVA 127
Query: 720 TIEGLFDYVRRSGCFNDEVSSHQILEILQALVLDNEIEEVKSTGKGVFSSMPLGKVCYHR 541
T+EG+ D V++SG F + QI EIL+ LVLD + EVKSTG G F S P+GKVCY
Sbjct: 128 TLEGISDEVKKSGIFKTSFTKQQIEEILRVLVLDKRVTEVKSTGMGEFGSFPVGKVCYKS 187
Query: 540 L----TRRNLTTGILSSIPCGVCPRIRECTPDGIISPINCVYFKKWLDF 406
++R G ++SIPCGVCPRI +CTPDGIISP CVYF KWLDF
Sbjct: 188 TSKGGSKREPKVGAMASIPCGVCPRISQCTPDGIISPRTCVYFTKWLDF 236