BLASTX nr result

ID: Cinnamomum23_contig00030356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00030356
         (244 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008367718.1| PREDICTED: F-box protein At5g39450-like [Mal...    59   2e-06
ref|XP_012459015.1| PREDICTED: F-box protein At5g39450 [Gossypiu...    57   4e-06
ref|NP_198762.1| F-box protein [Arabidopsis thaliana] gi|7526268...    57   4e-06
ref|XP_002868714.1| F-box family protein [Arabidopsis lyrata sub...    57   5e-06

>ref|XP_008367718.1| PREDICTED: F-box protein At5g39450-like [Malus domestica]
          Length = 626

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 24/47 (51%), Positives = 32/47 (68%)
 Frame = -3

Query: 242 SMAFFLHGSENNSDYLYPGFVNSIHPRCSLLRLEVEPRPSRRSCNLL 102
           S +FFLHG +N  DY+YPGFV  +   C++L LE+EPRP +    LL
Sbjct: 148 SSSFFLHGRDNGQDYVYPGFVKPVSRSCNVLLLEIEPRPHKNGVELL 194


>ref|XP_012459015.1| PREDICTED: F-box protein At5g39450 [Gossypium raimondii]
           gi|763808418|gb|KJB75320.1| hypothetical protein
           B456_012G036900 [Gossypium raimondii]
          Length = 627

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/47 (53%), Positives = 29/47 (61%)
 Frame = -3

Query: 242 SMAFFLHGSENNSDYLYPGFVNSIHPRCSLLRLEVEPRPSRRSCNLL 102
           S  F LHG E   D+LYPG V S+   C++L LEVEPR  R  C LL
Sbjct: 148 STTFLLHGREKGCDFLYPGLVESVEQNCNVLLLEVEPREKRNGCKLL 194


>ref|NP_198762.1| F-box protein [Arabidopsis thaliana]
           gi|75262687|sp|Q9FLZ1.1|FB272_ARATH RecName:
           Full=Putative F-box protein At5g39460
           gi|10177693|dbj|BAB11019.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007052|gb|AED94435.1| F-box
           protein [Arabidopsis thaliana]
          Length = 571

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/49 (51%), Positives = 31/49 (63%)
 Frame = -3

Query: 242 SMAFFLHGSENNSDYLYPGFVNSIHPRCSLLRLEVEPRPSRRSCNLLRR 96
           S  FFLHG +    +LYPGFV  I   C++L LEVEPR  + SCN + R
Sbjct: 150 SKGFFLHGRDKQGSFLYPGFVMDIEKSCNVLLLEVEPRSEKSSCNEIER 198


>ref|XP_002868714.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314550|gb|EFH44973.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 575

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 25/49 (51%), Positives = 31/49 (63%)
 Frame = -3

Query: 242 SMAFFLHGSENNSDYLYPGFVNSIHPRCSLLRLEVEPRPSRRSCNLLRR 96
           S  FFLHG +     LYPGFV  I   C+LL+LE+EPR  + SCN + R
Sbjct: 150 STGFFLHGRDKEGSCLYPGFVMGIEKSCNLLQLEIEPRREKSSCNEIER 198


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