BLASTX nr result
ID: Cinnamomum23_contig00030356
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cinnamomum23_contig00030356 (244 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_008367718.1| PREDICTED: F-box protein At5g39450-like [Mal... 59 2e-06 ref|XP_012459015.1| PREDICTED: F-box protein At5g39450 [Gossypiu... 57 4e-06 ref|NP_198762.1| F-box protein [Arabidopsis thaliana] gi|7526268... 57 4e-06 ref|XP_002868714.1| F-box family protein [Arabidopsis lyrata sub... 57 5e-06 >ref|XP_008367718.1| PREDICTED: F-box protein At5g39450-like [Malus domestica] Length = 626 Score = 58.5 bits (140), Expect = 2e-06 Identities = 24/47 (51%), Positives = 32/47 (68%) Frame = -3 Query: 242 SMAFFLHGSENNSDYLYPGFVNSIHPRCSLLRLEVEPRPSRRSCNLL 102 S +FFLHG +N DY+YPGFV + C++L LE+EPRP + LL Sbjct: 148 SSSFFLHGRDNGQDYVYPGFVKPVSRSCNVLLLEIEPRPHKNGVELL 194 >ref|XP_012459015.1| PREDICTED: F-box protein At5g39450 [Gossypium raimondii] gi|763808418|gb|KJB75320.1| hypothetical protein B456_012G036900 [Gossypium raimondii] Length = 627 Score = 57.4 bits (137), Expect = 4e-06 Identities = 25/47 (53%), Positives = 29/47 (61%) Frame = -3 Query: 242 SMAFFLHGSENNSDYLYPGFVNSIHPRCSLLRLEVEPRPSRRSCNLL 102 S F LHG E D+LYPG V S+ C++L LEVEPR R C LL Sbjct: 148 STTFLLHGREKGCDFLYPGLVESVEQNCNVLLLEVEPREKRNGCKLL 194 >ref|NP_198762.1| F-box protein [Arabidopsis thaliana] gi|75262687|sp|Q9FLZ1.1|FB272_ARATH RecName: Full=Putative F-box protein At5g39460 gi|10177693|dbj|BAB11019.1| unnamed protein product [Arabidopsis thaliana] gi|332007052|gb|AED94435.1| F-box protein [Arabidopsis thaliana] Length = 571 Score = 57.4 bits (137), Expect = 4e-06 Identities = 25/49 (51%), Positives = 31/49 (63%) Frame = -3 Query: 242 SMAFFLHGSENNSDYLYPGFVNSIHPRCSLLRLEVEPRPSRRSCNLLRR 96 S FFLHG + +LYPGFV I C++L LEVEPR + SCN + R Sbjct: 150 SKGFFLHGRDKQGSFLYPGFVMDIEKSCNVLLLEVEPRSEKSSCNEIER 198 >ref|XP_002868714.1| F-box family protein [Arabidopsis lyrata subsp. lyrata] gi|297314550|gb|EFH44973.1| F-box family protein [Arabidopsis lyrata subsp. lyrata] Length = 575 Score = 57.0 bits (136), Expect = 5e-06 Identities = 25/49 (51%), Positives = 31/49 (63%) Frame = -3 Query: 242 SMAFFLHGSENNSDYLYPGFVNSIHPRCSLLRLEVEPRPSRRSCNLLRR 96 S FFLHG + LYPGFV I C+LL+LE+EPR + SCN + R Sbjct: 150 STGFFLHGRDKEGSCLYPGFVMGIEKSCNLLQLEIEPRREKSSCNEIER 198