BLASTX nr result

ID: Cinnamomum23_contig00030195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00030195
         (974 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFU25704.1| gag-pol precursor [Castanea mollissima]                 62   8e-07
ref|XP_008245130.1| PREDICTED: uncharacterized protein LOC103343...    60   2e-06
gb|KDO53827.1| hypothetical protein CISIN_1g046413mg, partial [C...    60   2e-06
ref|XP_008238602.1| PREDICTED: uncharacterized protein LOC103337...    60   2e-06
ref|XP_008227357.1| PREDICTED: uncharacterized protein LOC103326...    60   3e-06

>gb|AFU25704.1| gag-pol precursor [Castanea mollissima]
          Length = 428

 Score = 61.6 bits (148), Expect = 8e-07
 Identities = 34/77 (44%), Positives = 44/77 (57%)
 Frame = +2

Query: 647 SPFSQEIKNFSLPKRFSFPRFIFYDRTSDPEAHLRHFT*RMSVWGDVGHLNCRVFSSSLG 826
           SPF   I    LP+RFS P F  Y+  +DP  H+ H   +M V+ +   L CRV SSSLG
Sbjct: 11  SPFVARINRAKLPRRFSQPIFTVYNGRTDPVEHVSHVNQKMVVYSNNEALMCRVCSSSLG 70

Query: 827 DLPLPLRWFCALPSGSV 877
             P+ +RWF AL   S+
Sbjct: 71  --PVAMRWFDALAESSL 85


>ref|XP_008245130.1| PREDICTED: uncharacterized protein LOC103343242 [Prunus mume]
          Length = 687

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
 Frame = +2

Query: 560 VKQEVQARMAEIGFARDQTEACDEE-DQGMS-PFSQEIKNFSLPKRFSFPRFIFYDRTSD 733
           V++ V  R+ ++  + +  +A  +E DQ +S PF+ EI+  + PKRFS P F  +   SD
Sbjct: 126 VEKLVNDRLRDLKTSGNLEDALRKEMDQAISTPFTPEIEQAAPPKRFSTPSFTHFKGDSD 185

Query: 734 PEAHLRHFT*RMSVWGDVGHLNCRVFSSSLGDLPLPLRWFCALPSGSV 877
           PE+HL+HF   M +      L C+ F+ +L  +     WF  LPSGS+
Sbjct: 186 PESHLKHFKSVMILHKADDALMCKAFAMTLRGIAQD--WFHTLPSGSI 231


>gb|KDO53827.1| hypothetical protein CISIN_1g046413mg, partial [Citrus sinensis]
          Length = 81

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 31/64 (48%), Positives = 40/64 (62%)
 Frame = +2

Query: 686 KRFSFPRFIFYDRTSDPEAHLRHFT*RMSVWGDVGHLNCRVFSSSLGDLPLPLRWFCALP 865
           K+F  PRF FY+ TSDP  H+RHF   M+++     L CR+F SSL    LPL W+  LP
Sbjct: 16  KKFVTPRFKFYNGTSDPINHIRHFRQTMALYEHEDALMCRIFPSSLDS--LPLNWYHDLP 73

Query: 866 SGSV 877
           S S+
Sbjct: 74  SSSI 77


>ref|XP_008238602.1| PREDICTED: uncharacterized protein LOC103337218 [Prunus mume]
          Length = 523

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 33/77 (42%), Positives = 45/77 (58%)
 Frame = +2

Query: 647 SPFSQEIKNFSLPKRFSFPRFIFYDRTSDPEAHLRHFT*RMSVWGDVGHLNCRVFSSSLG 826
           SPF+ EI+  + PKRFS P F  +   SDPE+HL+HF   M ++     L C+VF+ +L 
Sbjct: 251 SPFTVEIEQAAPPKRFSTPSFTCFKGDSDPESHLKHFKSLMILYKAEDALMCKVFAMTLQ 310

Query: 827 DLPLPLRWFCALPSGSV 877
                  WF  LPSGS+
Sbjct: 311 GAAHD--WFHTLPSGSI 325


>ref|XP_008227357.1| PREDICTED: uncharacterized protein LOC103326882 [Prunus mume]
          Length = 699

 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
 Frame = +2

Query: 560 VKQEVQARMAEIGFARDQTEACDEE-DQGM-SPFSQEIKNFSLPKRFSFPRFIFYDRTSD 733
           +++ V  R+ ++    +  +A  +E DQ + + F+ EI+  +  KRFS P FI + R SD
Sbjct: 251 IEKVVNDRLRDLKTGGNLEDALRKEMDQAIYTHFTPEIEQAAPLKRFSTPSFIHFKRDSD 310

Query: 734 PEAHLRHFT*RMSVWGDVGHLNCRVFSSSLGDLPLPLRWFCALPSGSV 877
           PE+HL+HF   M +      L C+VF+ +LG       WF  LPSGS+
Sbjct: 311 PESHLKHFKSVMMLHKADDALMCKVFTMTLGGAAHD--WFHTLPSGSI 356


Top