BLASTX nr result

ID: Cinnamomum23_contig00029382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00029382
         (573 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009605667.1| PREDICTED: uncharacterized protein LOC104100...    61   4e-07
gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                60   7e-07
ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596...    59   2e-06

>ref|XP_009605667.1| PREDICTED: uncharacterized protein LOC104100193 [Nicotiana
           tomentosiformis]
          Length = 161

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = +3

Query: 204 KISHHQAKKL-EMRMLTCMYSKISSDKIRHERLQEHLGAALIGNKIRKTHL*LFGNVQRK 380
           K SH Q  K+ EMRML  M      DKIR+E ++E +G A + +K+R+  L  FG++QR+
Sbjct: 42  KNSHIQKMKVAEMRMLRWMCGHTRMDKIRNEDIREKVGVAPMEDKMREVRLRWFGHIQRR 101

Query: 381 LTMVPVRKSXXXXXXXXXXXXXXXIKVDGLPRERGKTKRA*TEVVEIDLKKCSFSKKLA* 560
            T  PVR+                + V G  R RG+ K+   EV+  D+ +   ++ +A 
Sbjct: 102 STDAPVRR-------------CERLAVVGTRRGRGRPKKYWEEVIRQDMARLRITEDMAL 148

Query: 561 DR 566
           DR
Sbjct: 149 DR 150


>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 39/119 (32%), Positives = 60/119 (50%)
 Frame = +3

Query: 216 HQAKKLEMRMLTCMYSKISSDKIRHERLQEHLGAALIGNKIRKTHL*LFGNVQRKLTMVP 395
           H+    EMRML  M     SDKIR+E ++E +G A + +K+R+  L  FG+V+R+    P
Sbjct: 577 HKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAP 636

Query: 396 VRKSXXXXXXXXXXXXXXXIKVDGLPRERGKTKRA*TEVVEIDLKKCSFSKKLA*DRSE 572
           VR+                + V+G  R RG+ K+   EV+  DL     ++ +  DR E
Sbjct: 637 VRR-------------CEVMVVEGTRRGRGRPKKYWEEVIRQDLAMLHITEDMTLDRKE 682


>ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596609 [Solanum tuberosum]
          Length = 278

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
 Frame = +3

Query: 204 KISHHQAKKL-EMRMLTCMYSKISSDKIRHERLQEHLGAALIGNKIRKTHL*LFGNVQRK 380
           K SH Q   + EMRML  M     SDKIR+E ++E +G A + +K+R+  L  FG+V+R+
Sbjct: 159 KNSHVQKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVRRR 218

Query: 381 LTMVPVRKSXXXXXXXXXXXXXXXIKVDGLPRERGKTKRA*TEVVEIDLKKCSFSKKLA* 560
               PVR+                + V+G  R RG+ K+   EV+  DL +   ++ +  
Sbjct: 219 CADAPVRR-------------CEGLVVEGTRRGRGRPKKYWGEVIRQDLAQLHITEDMTL 265

Query: 561 DR 566
           DR
Sbjct: 266 DR 267


Top