BLASTX nr result
ID: Cinnamomum23_contig00029000
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00029000
(371 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 122 2e-31
ref|XP_012701527.1| PREDICTED: uncharacterized protein LOC105914... 119 2e-31
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 128 3e-31
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 128 3e-31
gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Ho... 120 3e-31
gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subc... 120 3e-31
gb|AAL86510.1|AC099040_14 putative retrotransposon protein [Oryz... 120 3e-31
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 116 5e-31
ref|XP_012703734.1| PREDICTED: uncharacterized protein LOC101755... 122 7e-31
gb|ABA95366.1| retrotransposon protein, putative, Ty1-copia subc... 121 7e-31
emb|CAN64963.1| hypothetical protein VITISV_002891 [Vitis vinifera] 117 1e-30
emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera] 127 1e-30
ref|XP_012084305.1| PREDICTED: uncharacterized protein LOC105643... 124 2e-30
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 117 2e-30
gb|AAB82754.1| retrofit [Oryza longistaminata] 115 3e-30
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 116 5e-30
gb|ABF94964.1| retrotransposon protein, putative, Ty1-copia subc... 115 8e-30
ref|XP_012700036.1| PREDICTED: uncharacterized protein LOC105914... 119 8e-30
emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera] 124 8e-30
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc... 118 1e-29
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
Length = 1313
Score = 122 bits (305), Expect(2) = 2e-31
Identities = 55/97 (56%), Positives = 74/97 (76%)
Frame = -1
Query: 371 HLAMTRPAISFVVSQF*QFMHRPTTTHWTAVKCILRYLKATISYDIFLRRSSSLPLSAFS 192
+L +TRP I+F V++ QF+H PTT HW AVK ILRY+K + + + RS S +SAFS
Sbjct: 1104 YLTLTRPDIAFSVNKVCQFLHAPTTLHWAAVKRILRYIKQCTNLGLHIHRSDSTLVSAFS 1163
Query: 191 DADWAGNPDDRRSTSGYCIFLGPNLISWSSKKQPTVA 81
DADWAG+ DDR+ST G+ +FLG NL+SWS++KQPTV+
Sbjct: 1164 DADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVS 1200
Score = 40.0 bits (92), Expect(2) = 2e-31
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -3
Query: 78 SSTESEYEGLANTTAELLWIKTLLRD 1
SSTESEY+ LAN TAEL+W++ LL +
Sbjct: 1202 SSTESEYKALANATAELIWVQILLTE 1227
>ref|XP_012701527.1| PREDICTED: uncharacterized protein LOC105914440 [Setaria italica]
Length = 961
Score = 119 bits (297), Expect(2) = 2e-31
Identities = 55/97 (56%), Positives = 73/97 (75%)
Frame = -1
Query: 371 HLAMTRPAISFVVSQF*QFMHRPTTTHWTAVKCILRYLKATISYDIFLRRSSSLPLSAFS 192
+L +TRP I+F V++ QF+H PTT HW AVK ILRYLK + +++S S +SAFS
Sbjct: 745 YLTLTRPDIAFSVNKVCQFLHAPTTVHWAAVKRILRYLKQCTELGLKIQKSPSTLVSAFS 804
Query: 191 DADWAGNPDDRRSTSGYCIFLGPNLISWSSKKQPTVA 81
DADWAG+ DDRRST G+ +FLG NL+SWS++KQ TV+
Sbjct: 805 DADWAGSVDDRRSTGGFAVFLGSNLVSWSARKQATVS 841
Score = 43.1 bits (100), Expect(2) = 2e-31
Identities = 18/26 (69%), Positives = 24/26 (92%)
Frame = -3
Query: 78 SSTESEYEGLANTTAELLWIKTLLRD 1
SSTESEY+ +AN TAE++WI+TLLR+
Sbjct: 843 SSTESEYKAIANATAEVMWIQTLLRE 868
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 128 bits (321), Expect(2) = 3e-31
Identities = 61/97 (62%), Positives = 75/97 (77%)
Frame = -1
Query: 371 HLAMTRPAISFVVSQF*QFMHRPTTTHWTAVKCILRYLKATISYDIFLRRSSSLPLSAFS 192
+L +TRP ISF V++ QFM PTTTHW AVK ILRYLK T+SY I +++S+SL + ++
Sbjct: 1151 YLTLTRPDISFAVNKACQFMATPTTTHWLAVKRILRYLKGTLSYGIQMQQSTSLDIHGYT 1210
Query: 191 DADWAGNPDDRRSTSGYCIFLGPNLISWSSKKQPTVA 81
DADWA PDDRRST GY IFLGPNL+SWSS KQ V+
Sbjct: 1211 DADWASCPDDRRSTGGYGIFLGPNLVSWSSNKQKVVS 1247
Score = 33.5 bits (75), Expect(2) = 3e-31
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = -3
Query: 78 SSTESEYEGLANTTAELLWIKTLLRD 1
SS ESEY LA+ T+E++WI+ +L++
Sbjct: 1249 SSAESEYRALASATSEMIWIQYVLQE 1274
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 128 bits (321), Expect(2) = 3e-31
Identities = 61/97 (62%), Positives = 75/97 (77%)
Frame = -1
Query: 371 HLAMTRPAISFVVSQF*QFMHRPTTTHWTAVKCILRYLKATISYDIFLRRSSSLPLSAFS 192
+L +TRP ISF V++ QFM PTTTHW AVK ILRYLK T+SY I +++S+SL + ++
Sbjct: 1009 YLTLTRPDISFAVNKACQFMATPTTTHWLAVKRILRYLKGTLSYGIQMQQSTSLDIHGYT 1068
Query: 191 DADWAGNPDDRRSTSGYCIFLGPNLISWSSKKQPTVA 81
DADWA PDDRRST GY IFLGPNL+SWSS KQ V+
Sbjct: 1069 DADWASCPDDRRSTGGYGIFLGPNLVSWSSNKQKVVS 1105
Score = 33.5 bits (75), Expect(2) = 3e-31
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = -3
Query: 78 SSTESEYEGLANTTAELLWIKTLLRD 1
SS ESEY LA+ T+E++WI+ +L++
Sbjct: 1107 SSAESEYRALASATSEMIWIQYVLQE 1132
>gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
sativa Japonica Group]
Length = 1150
Score = 120 bits (301), Expect(2) = 3e-31
Identities = 54/97 (55%), Positives = 76/97 (78%)
Frame = -1
Query: 371 HLAMTRPAISFVVSQF*QFMHRPTTTHWTAVKCILRYLKATISYDIFLRRSSSLPLSAFS 192
+L +TRP I+F +++ QF+H PT THW+AVK I+RYL+ T+ + +++S S+ ++AFS
Sbjct: 855 YLTLTRPDIAFSINKVCQFLHSPTLTHWSAVKRIIRYLRGTVGMGLKIQKSQSMLVNAFS 914
Query: 191 DADWAGNPDDRRSTSGYCIFLGPNLISWSSKKQPTVA 81
DADWAG DDRRSTSG+ +FLG NLISWS +KQ TV+
Sbjct: 915 DADWAGCVDDRRSTSGFAVFLGSNLISWSVRKQATVS 951
Score = 41.2 bits (95), Expect(2) = 3e-31
Identities = 16/26 (61%), Positives = 24/26 (92%)
Frame = -3
Query: 78 SSTESEYEGLANTTAELLWIKTLLRD 1
SSTE+EY+ LAN TAE++W++TLL++
Sbjct: 953 SSTEAEYKALANATAEVIWVQTLLKE 978
>gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 120 bits (301), Expect(2) = 3e-31
Identities = 54/97 (55%), Positives = 76/97 (78%)
Frame = -1
Query: 371 HLAMTRPAISFVVSQF*QFMHRPTTTHWTAVKCILRYLKATISYDIFLRRSSSLPLSAFS 192
+L +TRP I+F +++ QF+H PT THW+AVK I+RYL+ T+ + +++S S+ ++AFS
Sbjct: 817 YLTLTRPDIAFSINKVCQFLHSPTLTHWSAVKRIIRYLRGTVGMGLKIQKSQSMLVNAFS 876
Query: 191 DADWAGNPDDRRSTSGYCIFLGPNLISWSSKKQPTVA 81
DADWAG DDRRSTSG+ +FLG NLISWS +KQ TV+
Sbjct: 877 DADWAGCVDDRRSTSGFAVFLGSNLISWSVRKQATVS 913
Score = 41.2 bits (95), Expect(2) = 3e-31
Identities = 16/26 (61%), Positives = 24/26 (92%)
Frame = -3
Query: 78 SSTESEYEGLANTTAELLWIKTLLRD 1
SSTE+EY+ LAN TAE++W++TLL++
Sbjct: 915 SSTEAEYKALANATAEVIWVQTLLKE 940
>gb|AAL86510.1|AC099040_14 putative retrotransposon protein [Oryza sativa Japonica Group]
Length = 1139
Score = 120 bits (301), Expect(2) = 3e-31
Identities = 54/97 (55%), Positives = 76/97 (78%)
Frame = -1
Query: 371 HLAMTRPAISFVVSQF*QFMHRPTTTHWTAVKCILRYLKATISYDIFLRRSSSLPLSAFS 192
+L +TRP I+F +++ QF+H PT THW+AVK I+RYL+ T+ + +++S S+ ++AFS
Sbjct: 823 YLTLTRPDIAFSINKVCQFLHSPTLTHWSAVKRIIRYLRGTVGMGLKIQKSQSMLVNAFS 882
Query: 191 DADWAGNPDDRRSTSGYCIFLGPNLISWSSKKQPTVA 81
DADWAG DDRRSTSG+ +FLG NLISWS +KQ TV+
Sbjct: 883 DADWAGCVDDRRSTSGFAVFLGSNLISWSVRKQATVS 919
Score = 41.2 bits (95), Expect(2) = 3e-31
Identities = 16/26 (61%), Positives = 24/26 (92%)
Frame = -3
Query: 78 SSTESEYEGLANTTAELLWIKTLLRD 1
SSTE+EY+ LAN TAE++W++TLL++
Sbjct: 921 SSTEAEYKALANATAEVIWVQTLLKE 946
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 116 bits (291), Expect(2) = 5e-31
Identities = 52/97 (53%), Positives = 73/97 (75%)
Frame = -1
Query: 371 HLAMTRPAISFVVSQF*QFMHRPTTTHWTAVKCILRYLKATISYDIFLRRSSSLPLSAFS 192
+L +TRP I++ V++ QF+H PTT HWTAVK ILRYL S + + +S+S + +S
Sbjct: 1227 YLTLTRPDIAYSVNKVCQFLHAPTTDHWTAVKRILRYLNQCTSLGLNIHKSASTLVHGYS 1286
Query: 191 DADWAGNPDDRRSTSGYCIFLGPNLISWSSKKQPTVA 81
DADWAG+ DDR+ST G+ +FLG NL+SWS++KQPTV+
Sbjct: 1287 DADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVS 1323
Score = 44.3 bits (103), Expect(2) = 5e-31
Identities = 18/26 (69%), Positives = 25/26 (96%)
Frame = -3
Query: 78 SSTESEYEGLANTTAELLWIKTLLRD 1
SSTE+EY+ +ANTTAEL+W++TLLR+
Sbjct: 1325 SSTEAEYKAVANTTAELIWVQTLLRE 1350
>ref|XP_012703734.1| PREDICTED: uncharacterized protein LOC101755795 [Setaria italica]
Length = 778
Score = 122 bits (306), Expect(2) = 7e-31
Identities = 57/97 (58%), Positives = 72/97 (74%)
Frame = -1
Query: 371 HLAMTRPAISFVVSQF*QFMHRPTTTHWTAVKCILRYLKATISYDIFLRRSSSLPLSAFS 192
+L +TRP I+F V++ QF+H PTT HW AVK ILRY+K + + RS S +SAFS
Sbjct: 569 YLTLTRPDIAFAVNKVCQFLHSPTTVHWEAVKRILRYIKYCTRLGLRIHRSQSTLVSAFS 628
Query: 191 DADWAGNPDDRRSTSGYCIFLGPNLISWSSKKQPTVA 81
DADWAGN DD RST G+ +FLG NL+SWSS+KQPTV+
Sbjct: 629 DADWAGNIDDTRSTGGFAVFLGSNLVSWSSRKQPTVS 665
Score = 38.1 bits (87), Expect(2) = 7e-31
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = -3
Query: 78 SSTESEYEGLANTTAELLWIKTLL 7
SSTESEY+ +AN TAE++WI+ LL
Sbjct: 667 SSTESEYKAIANATAEVMWIQILL 690
>gb|ABA95366.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 552
Score = 121 bits (304), Expect(2) = 7e-31
Identities = 57/97 (58%), Positives = 74/97 (76%)
Frame = -1
Query: 371 HLAMTRPAISFVVSQF*QFMHRPTTTHWTAVKCILRYLKATISYDIFLRRSSSLPLSAFS 192
+L +TRP ISF V++ QF+H PTT HWT VK ILRYLK T++ + + +SSSL +S F
Sbjct: 342 YLTLTRPDISFSVNKVCQFLHSPTTVHWTVVKRILRYLKYTVNCGLRISKSSSLLVSGFC 401
Query: 191 DADWAGNPDDRRSTSGYCIFLGPNLISWSSKKQPTVA 81
DADWAG DDRRST G+ +FLG NL+SWS++KQ TV+
Sbjct: 402 DADWAGCLDDRRSTGGFAVFLGSNLVSWSARKQTTVS 438
Score = 38.9 bits (89), Expect(2) = 7e-31
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = -3
Query: 102 QKATHSCSSSTESEYEGLANTTAELLWIKTLL 7
+K T SSTE+EY+ LA+T AE++W++TLL
Sbjct: 432 RKQTTVSRSSTEAEYKALADTKAEIMWLQTLL 463
>emb|CAN64963.1| hypothetical protein VITISV_002891 [Vitis vinifera]
Length = 1318
Score = 117 bits (292), Expect(2) = 1e-30
Identities = 56/98 (57%), Positives = 69/98 (70%)
Frame = -1
Query: 371 HLAMTRPAISFVVSQF*QFMHRPTTTHWTAVKCILRYLKATISYDIFLRRSSSLPLSAFS 192
+L +TRP IS+ V Q Q++ P +TH+ AV CILRYLK T+ + +F S L L AFS
Sbjct: 1107 YLTVTRPDISYAVHQVSQYLSAPRSTHYAAVLCILRYLKGTLFHGLFYSAQSPLVLRAFS 1166
Query: 191 DADWAGNPDDRRSTSGYCIFLGPNLISWSSKKQPTVAH 78
DADWAG+P D RST+GYC LG +LISW SKKQ VAH
Sbjct: 1167 DADWAGDPIDHRSTTGYCFLLGSSLISWRSKKQTFVAH 1204
Score = 42.7 bits (99), Expect(2) = 1e-30
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = -3
Query: 102 QKATHSCSSSTESEYEGLANTTAELLWIKTLLRD 1
+K T SSTE+EY LA+TT+ELLW++ LL+D
Sbjct: 1197 KKQTFVAHSSTEAEYRALADTTSELLWLRWLLKD 1230
>emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]
Length = 1007
Score = 127 bits (320), Expect(2) = 1e-30
Identities = 61/97 (62%), Positives = 74/97 (76%)
Frame = -1
Query: 371 HLAMTRPAISFVVSQF*QFMHRPTTTHWTAVKCILRYLKATISYDIFLRRSSSLPLSAFS 192
+L +TRP ISF V++ QFM PTTTHW AVK ILRYLK T+SYDI ++ S+SL + ++
Sbjct: 767 YLTLTRPDISFAVNKACQFMATPTTTHWLAVKWILRYLKGTLSYDIQMQXSTSLDIHGYT 826
Query: 191 DADWAGNPDDRRSTSGYCIFLGPNLISWSSKKQPTVA 81
ADWA PDDRRST GY IFLGPNL+SWSS KQ V+
Sbjct: 827 XADWASCPDDRRSTGGYGIFLGPNLVSWSSNKQKVVS 863
Score = 32.0 bits (71), Expect(2) = 1e-30
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -3
Query: 78 SSTESEYEGLANTTAELLWIKTL 10
SS ESEY LA+ T+E++WI+ L
Sbjct: 865 SSAESEYRALASATSEIIWIQYL 887
>ref|XP_012084305.1| PREDICTED: uncharacterized protein LOC105643719 [Jatropha curcas]
Length = 1003
Score = 124 bits (310), Expect(2) = 2e-30
Identities = 58/97 (59%), Positives = 70/97 (72%)
Frame = -1
Query: 371 HLAMTRPAISFVVSQF*QFMHRPTTTHWTAVKCILRYLKATISYDIFLRRSSSLPLSAFS 192
++ +TRP +SF V++ QFMH PT HW A K +LRYL T S +FL S + L FS
Sbjct: 791 YVTLTRPDVSFAVNKLAQFMHHPTAAHWIAAKRLLRYLHGTASMGLFLSIDSPISLQCFS 850
Query: 191 DADWAGNPDDRRSTSGYCIFLGPNLISWSSKKQPTVA 81
D+DWAG PDDR+STSGY I+LG NLISWSSKKQ TVA
Sbjct: 851 DSDWAGCPDDRKSTSGYAIYLGNNLISWSSKKQSTVA 887
Score = 35.4 bits (80), Expect(2) = 2e-30
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = -3
Query: 102 QKATHSCSSSTESEYEGLANTTAELLWIKTLLRD 1
+K + SSTESEY +A+ T+E++WI +LL +
Sbjct: 881 KKQSTVARSSTESEYRSIAHATSEIMWILSLLSE 914
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 117 bits (293), Expect(2) = 2e-30
Identities = 55/97 (56%), Positives = 73/97 (75%)
Frame = -1
Query: 371 HLAMTRPAISFVVSQF*QFMHRPTTTHWTAVKCILRYLKATISYDIFLRRSSSLPLSAFS 192
+L +TRP I+F V++ QF+H PTT HW AVK ILRYLK + L +S S+ +SA+S
Sbjct: 1038 YLTLTRPDIAFPVNKVCQFLHAPTTHHWAAVKRILRYLKQCTRLGLKLSKSRSMLVSAYS 1097
Query: 191 DADWAGNPDDRRSTSGYCIFLGPNLISWSSKKQPTVA 81
DADWAG+ DDRRST G+ +FLG NL+SWS++KQ TV+
Sbjct: 1098 DADWAGSLDDRRSTGGFAVFLGDNLVSWSARKQATVS 1134
Score = 41.6 bits (96), Expect(2) = 2e-30
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -3
Query: 78 SSTESEYEGLANTTAELLWIKTLLRD 1
SSTESEY+ LAN TAE++W++TLL +
Sbjct: 1136 SSTESEYKALANATAEIMWVQTLLAE 1161
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 115 bits (288), Expect(2) = 3e-30
Identities = 51/97 (52%), Positives = 73/97 (75%)
Frame = -1
Query: 371 HLAMTRPAISFVVSQF*QFMHRPTTTHWTAVKCILRYLKATISYDIFLRRSSSLPLSAFS 192
+L +TRP I++ V++ QF+H PTT+HW AVK ILRYL S + + +S+S + +S
Sbjct: 1236 YLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSLGLHIHKSASTLVHGYS 1295
Query: 191 DADWAGNPDDRRSTSGYCIFLGPNLISWSSKKQPTVA 81
DADWAG+ DDR+ST G+ +FLG NL+SWS++KQPTV+
Sbjct: 1296 DADWAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVS 1332
Score = 43.1 bits (100), Expect(2) = 3e-30
Identities = 17/26 (65%), Positives = 25/26 (96%)
Frame = -3
Query: 78 SSTESEYEGLANTTAELLWIKTLLRD 1
SSTE+EY+ +ANTTAEL+W++TLL++
Sbjct: 1334 SSTEAEYKAVANTTAELIWVQTLLKE 1359
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 116 bits (290), Expect(2) = 5e-30
Identities = 54/97 (55%), Positives = 72/97 (74%)
Frame = -1
Query: 371 HLAMTRPAISFVVSQF*QFMHRPTTTHWTAVKCILRYLKATISYDIFLRRSSSLPLSAFS 192
+L +TRP I+F V++ QF+H PTT HW AVK ILRYLK + L +S S+ +SA+S
Sbjct: 1238 YLTLTRPDIAFPVNKVCQFLHAPTTVHWAAVKRILRYLKQCTKLGLKLCKSKSMLVSAYS 1297
Query: 191 DADWAGNPDDRRSTSGYCIFLGPNLISWSSKKQPTVA 81
DADWAG+ DDRRST G+ +FLG NL+SW ++KQ TV+
Sbjct: 1298 DADWAGSLDDRRSTGGFAVFLGDNLVSWCARKQATVS 1334
Score = 41.6 bits (96), Expect(2) = 5e-30
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -3
Query: 78 SSTESEYEGLANTTAELLWIKTLLRD 1
SSTESEY+ LAN TAE++W++TLL +
Sbjct: 1336 SSTESEYKALANATAEIMWVQTLLTE 1361
>gb|ABF94964.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 846
Score = 115 bits (288), Expect(2) = 8e-30
Identities = 54/97 (55%), Positives = 72/97 (74%)
Frame = -1
Query: 371 HLAMTRPAISFVVSQF*QFMHRPTTTHWTAVKCILRYLKATISYDIFLRRSSSLPLSAFS 192
+L +TRP I+F V++ QF+H PTT HW AVK ILRYLK + L +S S+ +SA+S
Sbjct: 637 YLTLTRPDIAFPVNKVCQFLHAPTTIHWVAVKRILRYLKHCTKLGLKLCKSKSMLVSAYS 696
Query: 191 DADWAGNPDDRRSTSGYCIFLGPNLISWSSKKQPTVA 81
DADWAG+ DDRRST G+ +FLG NL+SW ++KQ TV+
Sbjct: 697 DADWAGSLDDRRSTGGFAVFLGDNLVSWCARKQATVS 733
Score = 41.6 bits (96), Expect(2) = 8e-30
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -3
Query: 78 SSTESEYEGLANTTAELLWIKTLLRD 1
SSTESEY+ LAN TAE++W++TLL +
Sbjct: 735 SSTESEYKALANATAEIMWVQTLLTE 760
>ref|XP_012700036.1| PREDICTED: uncharacterized protein LOC105914016 [Setaria italica]
Length = 726
Score = 119 bits (299), Expect(2) = 8e-30
Identities = 52/97 (53%), Positives = 74/97 (76%)
Frame = -1
Query: 371 HLAMTRPAISFVVSQF*QFMHRPTTTHWTAVKCILRYLKATISYDIFLRRSSSLPLSAFS 192
HL +TRP +++ +++ QF+H PTT HWT VK ILRY+K T + +++++SL + AFS
Sbjct: 513 HLTLTRPNLAYSINKVCQFLHSPTTVHWTVVKTILRYVKYTCGVRLKIQKNNSLVVGAFS 572
Query: 191 DADWAGNPDDRRSTSGYCIFLGPNLISWSSKKQPTVA 81
DADWAG+ DDRRST G+ +F G NLISWS++KQ TV+
Sbjct: 573 DADWAGSVDDRRSTGGFAVFFGDNLISWSARKQATVS 609
Score = 37.4 bits (85), Expect(2) = 8e-30
Identities = 14/26 (53%), Positives = 23/26 (88%)
Frame = -3
Query: 78 SSTESEYEGLANTTAELLWIKTLLRD 1
SSTE+EY+ +AN TAE++W+++LL +
Sbjct: 611 SSTEAEYKSMANATAEVIWLESLLAE 636
>emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]
Length = 478
Score = 124 bits (311), Expect(2) = 8e-30
Identities = 60/97 (61%), Positives = 75/97 (77%)
Frame = -1
Query: 371 HLAMTRPAISFVVSQF*QFMHRPTTTHWTAVKCILRYLKATISYDIFLRRSSSLPLSAFS 192
+L++TRP I++ V++ QFMH+PT+ HW AVK +LRYL T+ +DI LRR+S L L AFS
Sbjct: 255 YLSLTRPDIAYTVNKLSQFMHQPTSDHWNAVKRLLRYLCGTLDHDITLRRTSPLALHAFS 314
Query: 191 DADWAGNPDDRRSTSGYCIFLGPNLISWSSKKQPTVA 81
D+DWAGN DD STS Y I+LG N ISWSSKKQ TVA
Sbjct: 315 DSDWAGNKDDFTSTSAYIIYLGHNPISWSSKKQRTVA 351
Score = 32.7 bits (73), Expect(2) = 8e-30
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = -3
Query: 78 SSTESEYEGLANTTAELLWIKTLLRD 1
SSTE+EY +A+T AE+ WI +LL +
Sbjct: 353 SSTEAEYRSVASTAAEIRWICSLLTE 378
>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2074
Score = 118 bits (295), Expect(2) = 1e-29
Identities = 55/97 (56%), Positives = 73/97 (75%)
Frame = -1
Query: 371 HLAMTRPAISFVVSQF*QFMHRPTTTHWTAVKCILRYLKATISYDIFLRRSSSLPLSAFS 192
+L +TRP ISF V++ QF+H PT HW AVK ILRY+K ++ + + RSSS +SAF
Sbjct: 1865 YLTLTRPDISFAVNKVCQFLHSPTIDHWMAVKRILRYVKFSVDLGLKISRSSSTLVSAFL 1924
Query: 191 DADWAGNPDDRRSTSGYCIFLGPNLISWSSKKQPTVA 81
DADWAG+ DDRRST G+ +FLG NL+SWS++KQ TV+
Sbjct: 1925 DADWAGSIDDRRSTGGFAVFLGSNLVSWSARKQATVS 1961
Score = 38.1 bits (87), Expect(2) = 1e-29
Identities = 14/26 (53%), Positives = 23/26 (88%)
Frame = -3
Query: 78 SSTESEYEGLANTTAELLWIKTLLRD 1
SSTE+EY+ +AN TAE++W++ LL++
Sbjct: 1963 SSTEAEYKAVANATAEVMWVQALLKE 1988