BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00028737
         (319 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO93004.1| putative RNA-dependent RNA-polymerase, partial [S...   161   1e-37
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...   161   1e-37
gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tu...   161   1e-37
gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum de...   161   1e-37
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de...   161   1e-37
gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de...   161   1e-37
gb|AAT38699.2| RNA dependent RNA polymerase family protein [Sola...   161   1e-37
gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solan...   161   1e-37
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...   161   2e-37
ref|XP_008220919.1| PREDICTED: probable RNA-dependent RNA polyme...   160   2e-37
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   160   2e-37
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   160   3e-37
gb|ABI34378.1| RNA-directed RNA polymerase, putative [Solanum tu...   160   3e-37
ref|XP_010527810.1| PREDICTED: RNA-dependent RNA polymerase 1 [T...   159   5e-37
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu...   159   7e-37
gb|ABI34311.1| RNA dependent RNA polymerase family protein [Sola...   159   7e-37
ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prun...   159   9e-37
ref|XP_007225416.1| hypothetical protein PRUPE_ppa000562mg [Prun...   157   2e-36
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]       157   2e-36
ref|XP_010088177.1| RNA-dependent RNA polymerase 1 [Morus notabi...   157   3e-36

>gb|ABO93004.1| putative RNA-dependent RNA-polymerase, partial [Solanum tuberosum]
          Length = 841

 Score =  161 bits (408), Expect = 1e-37
 Identities = 78/106 (73%), Positives = 90/106 (84%)
 Frame = +2

Query: 2   STLRGGIVVGDKKFEFLAFSSSQLKENSVWMFASRSGCTAADIREWMGDFTDIKNVGKYS 181
           STLR G V+GDKKFEFLAFSSSQL++NSVWMFASR G TA DIR WMGDF+ IKNV KY+
Sbjct: 429 STLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGDFSQIKNVAKYA 488

Query: 182 ARLGQSFGSSRESLTILKDEIEYIPDIETEDKKYNFSDGIGKISAD 319
           ARLGQSFGSS+E+L++L+ EIE IPD++     Y FSDGIGKISAD
Sbjct: 489 ARLGQSFGSSKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISAD 534


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score =  161 bits (408), Expect = 1e-37
 Identities = 78/106 (73%), Positives = 89/106 (83%)
 Frame = +2

Query: 2   STLRGGIVVGDKKFEFLAFSSSQLKENSVWMFASRSGCTAADIREWMGDFTDIKNVGKYS 181
           STLR G V+GDKKFEFLAFSSSQL++NSVWMFASR G T  DIR WMGDF+ IKNV KY+
Sbjct: 429 STLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRRGLTTNDIRSWMGDFSQIKNVAKYA 488

Query: 182 ARLGQSFGSSRESLTILKDEIEYIPDIETEDKKYNFSDGIGKISAD 319
           ARLGQSFGSSRE+L++L+ EIE IPD++     Y FSDGIGKISAD
Sbjct: 489 ARLGQSFGSSRETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISAD 534


>gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 935

 Score =  161 bits (408), Expect = 1e-37
 Identities = 78/106 (73%), Positives = 89/106 (83%)
 Frame = +2

Query: 2   STLRGGIVVGDKKFEFLAFSSSQLKENSVWMFASRSGCTAADIREWMGDFTDIKNVGKYS 181
           STLR G V+GDKKFEFLAFSSSQL++NSVWMFASR G TA DIR WMGDF+ IKNV KY+
Sbjct: 429 STLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRRGLTANDIRSWMGDFSQIKNVAKYA 488

Query: 182 ARLGQSFGSSRESLTILKDEIEYIPDIETEDKKYNFSDGIGKISAD 319
           AR GQSFGSSRE+L++L+ EIE IPD++     Y FSDGIGKISAD
Sbjct: 489 ARFGQSFGSSRETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISAD 534


>gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1021

 Score =  161 bits (408), Expect = 1e-37
 Identities = 78/106 (73%), Positives = 90/106 (84%)
 Frame = +2

Query: 2   STLRGGIVVGDKKFEFLAFSSSQLKENSVWMFASRSGCTAADIREWMGDFTDIKNVGKYS 181
           STLR G V+GDKKFEFLAFSSSQL++NSVWMFASR G TA DIR WMGDF+ IKNV KY+
Sbjct: 277 STLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGDFSQIKNVAKYA 336

Query: 182 ARLGQSFGSSRESLTILKDEIEYIPDIETEDKKYNFSDGIGKISAD 319
           ARLGQSFGSS+E+L++L+ EIE IPD++     Y FSDGIGKISAD
Sbjct: 337 ARLGQSFGSSKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISAD 382


>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1139

 Score =  161 bits (408), Expect = 1e-37
 Identities = 78/106 (73%), Positives = 90/106 (84%)
 Frame = +2

Query: 2   STLRGGIVVGDKKFEFLAFSSSQLKENSVWMFASRSGCTAADIREWMGDFTDIKNVGKYS 181
           STLR G V+GDKKFEFLAFSSSQL++NSVWMFASR G TA DIR WMGDF+ IKNV KY+
Sbjct: 421 STLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGDFSQIKNVAKYA 480

Query: 182 ARLGQSFGSSRESLTILKDEIEYIPDIETEDKKYNFSDGIGKISAD 319
           ARLGQSFGSS+E+L++L+ EIE IPD++     Y FSDGIGKISAD
Sbjct: 481 ARLGQSFGSSKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISAD 526


>gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1180

 Score =  161 bits (408), Expect = 1e-37
 Identities = 78/106 (73%), Positives = 90/106 (84%)
 Frame = +2

Query: 2   STLRGGIVVGDKKFEFLAFSSSQLKENSVWMFASRSGCTAADIREWMGDFTDIKNVGKYS 181
           STLR G V+GDKKFEFLAFSSSQL++NSVWMFASR G TA DIR WMGDF+ IKNV KY+
Sbjct: 395 STLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGDFSQIKNVAKYA 454

Query: 182 ARLGQSFGSSRESLTILKDEIEYIPDIETEDKKYNFSDGIGKISAD 319
           ARLGQSFGSS+E+L++L+ EIE IPD++     Y FSDGIGKISAD
Sbjct: 455 ARLGQSFGSSKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISAD 500


>gb|AAT38699.2| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  161 bits (408), Expect = 1e-37
 Identities = 78/106 (73%), Positives = 89/106 (83%)
 Frame = +2

Query: 2   STLRGGIVVGDKKFEFLAFSSSQLKENSVWMFASRSGCTAADIREWMGDFTDIKNVGKYS 181
           STLR G V+GDKKFEFLAFSSSQL++NSVWMFASR G T  DIR WMGDF+ IKNV KY+
Sbjct: 277 STLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRRGLTTNDIRSWMGDFSQIKNVAKYA 336

Query: 182 ARLGQSFGSSRESLTILKDEIEYIPDIETEDKKYNFSDGIGKISAD 319
           ARLGQSFGSSRE+L++L+ EIE IPD++     Y FSDGIGKISAD
Sbjct: 337 ARLGQSFGSSRETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISAD 382


>gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solanum demissum]
          Length = 1137

 Score =  161 bits (408), Expect = 1e-37
 Identities = 78/106 (73%), Positives = 89/106 (83%)
 Frame = +2

Query: 2   STLRGGIVVGDKKFEFLAFSSSQLKENSVWMFASRSGCTAADIREWMGDFTDIKNVGKYS 181
           STLR G V+GDKKFEFLAFSSSQL++NSVWMFASR G TA DIR WMGDF+ IKNV KY+
Sbjct: 465 STLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRRGLTANDIRSWMGDFSQIKNVAKYA 524

Query: 182 ARLGQSFGSSRESLTILKDEIEYIPDIETEDKKYNFSDGIGKISAD 319
           AR GQSFGSSRE+L++L+ EIE IPD++     Y FSDGIGKISAD
Sbjct: 525 ARFGQSFGSSRETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISAD 570


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
           gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
           [Solanum lycopersicum]
          Length = 1114

 Score =  161 bits (407), Expect = 2e-37
 Identities = 78/106 (73%), Positives = 89/106 (83%)
 Frame = +2

Query: 2   STLRGGIVVGDKKFEFLAFSSSQLKENSVWMFASRSGCTAADIREWMGDFTDIKNVGKYS 181
           STLR G V+GDKKFEFLAFSSSQL++NSVWMFASR G TA DIR WMGDF+ IKNV KY+
Sbjct: 429 STLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRAWMGDFSQIKNVAKYA 488

Query: 182 ARLGQSFGSSRESLTILKDEIEYIPDIETEDKKYNFSDGIGKISAD 319
           ARLGQSFGSSRE+L++L+ EIE IPD++     Y FSDGIGKIS D
Sbjct: 489 ARLGQSFGSSRETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISGD 534


>ref|XP_008220919.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Prunus mume]
          Length = 1123

 Score =  160 bits (406), Expect = 2e-37
 Identities = 79/106 (74%), Positives = 91/106 (85%)
 Frame = +2

Query: 2   STLRGGIVVGDKKFEFLAFSSSQLKENSVWMFASRSGCTAADIREWMGDFTDIKNVGKYS 181
           S LR GIV+G+KKFEFLAFSSSQL+ENS+WMFASR G TAADIREWMG+F DI+NV KY+
Sbjct: 443 SILRNGIVIGEKKFEFLAFSSSQLRENSMWMFASRRGLTAADIREWMGNFCDIRNVAKYA 502

Query: 182 ARLGQSFGSSRESLTILKDEIEYIPDIETEDKKYNFSDGIGKISAD 319
           ARLGQSFGSS E+L + + EIE IPD+ + D KY FSDGIGKISAD
Sbjct: 503 ARLGQSFGSSTETLNVGEHEIEVIPDVVSCDNKYVFSDGIGKISAD 548


>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
           tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
           tuberosum]
          Length = 1115

 Score =  160 bits (406), Expect = 2e-37
 Identities = 78/106 (73%), Positives = 89/106 (83%)
 Frame = +2

Query: 2   STLRGGIVVGDKKFEFLAFSSSQLKENSVWMFASRSGCTAADIREWMGDFTDIKNVGKYS 181
           STLR G V+GDKKFEFLAFSSSQL++NSVWMFASR G TA DIR WMGDF+ IKNV KY+
Sbjct: 429 STLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTAIDIRTWMGDFSQIKNVAKYA 488

Query: 182 ARLGQSFGSSRESLTILKDEIEYIPDIETEDKKYNFSDGIGKISAD 319
           ARLGQSFGSS E+L++L+ EIE IPD++     Y FSDGIGKISAD
Sbjct: 489 ARLGQSFGSSTETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISAD 534


>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
          Length = 1115

 Score =  160 bits (405), Expect = 3e-37
 Identities = 77/106 (72%), Positives = 90/106 (84%)
 Frame = +2

Query: 2   STLRGGIVVGDKKFEFLAFSSSQLKENSVWMFASRSGCTAADIREWMGDFTDIKNVGKYS 181
           STL+ G V+GDKKFEFLAFSSSQL++NSVWMFASR G TA DIR WMGDF+ IKNV KY+
Sbjct: 429 STLQKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTAIDIRTWMGDFSQIKNVAKYA 488

Query: 182 ARLGQSFGSSRESLTILKDEIEYIPDIETEDKKYNFSDGIGKISAD 319
           ARLGQSFGSS+E+L++L+ EIE IPD++     Y FSDGIGKISAD
Sbjct: 489 ARLGQSFGSSKETLSVLRHEIEIIPDVKVHGTSYVFSDGIGKISAD 534


>gb|ABI34378.1| RNA-directed RNA polymerase, putative [Solanum tuberosum]
          Length = 1050

 Score =  160 bits (405), Expect = 3e-37
 Identities = 78/106 (73%), Positives = 89/106 (83%)
 Frame = +2

Query: 2   STLRGGIVVGDKKFEFLAFSSSQLKENSVWMFASRSGCTAADIREWMGDFTDIKNVGKYS 181
           STLR G V+GDKKFEFLAFSSSQL++NSVWMFASR G TA DIR WMGDF+ IKNV KY+
Sbjct: 277 STLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGDFSQIKNVAKYA 336

Query: 182 ARLGQSFGSSRESLTILKDEIEYIPDIETEDKKYNFSDGIGKISAD 319
           ARLGQSFGSS E+L++L+ EIE IPD++     Y FSDGIGKISAD
Sbjct: 337 ARLGQSFGSSTETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISAD 382


>ref|XP_010527810.1| PREDICTED: RNA-dependent RNA polymerase 1 [Tarenaya hassleriana]
          Length = 1109

 Score =  159 bits (403), Expect = 5e-37
 Identities = 81/107 (75%), Positives = 89/107 (83%), Gaps = 2/107 (1%)
 Frame = +2

Query: 2   STLRGGIVVGDKKFEFLAFSSSQLKENSVWMFASRSGCTAADIREWMGDFTDIKNVGKYS 181
           S LR GIV+GDKKFEFLAFSSSQL+ENS WMFASR G TAADIR WMGDF+ IKNV KY+
Sbjct: 437 SVLRHGIVIGDKKFEFLAFSSSQLRENSAWMFASRDGLTAADIRRWMGDFSSIKNVAKYA 496

Query: 182 ARLGQSFGSSRESLTILKDEIEYIPDIE--TEDKKYNFSDGIGKISA 316
           ARLGQSFGSSRE+L++ KDE E IPDIE     K Y FSDGIGKIS+
Sbjct: 497 ARLGQSFGSSRETLSVSKDETETIPDIEITVSGKHYVFSDGIGKISS 543


>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1065

 Score =  159 bits (402), Expect = 7e-37
 Identities = 76/106 (71%), Positives = 90/106 (84%)
 Frame = +2

Query: 2   STLRGGIVVGDKKFEFLAFSSSQLKENSVWMFASRSGCTAADIREWMGDFTDIKNVGKYS 181
           ST++ G V+GDKKFEFLAFSSSQL++NSVWMFASR G TA DIR WMGDF+ IKNV KY+
Sbjct: 428 STMQKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGDFSQIKNVAKYA 487

Query: 182 ARLGQSFGSSRESLTILKDEIEYIPDIETEDKKYNFSDGIGKISAD 319
           ARLGQSFGSS+E+L++L+ EIE IPD++     Y FSDGIGKISAD
Sbjct: 488 ARLGQSFGSSKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISAD 533


>gb|ABI34311.1| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  159 bits (402), Expect = 7e-37
 Identities = 77/106 (72%), Positives = 89/106 (83%)
 Frame = +2

Query: 2   STLRGGIVVGDKKFEFLAFSSSQLKENSVWMFASRSGCTAADIREWMGDFTDIKNVGKYS 181
           STLR G V+GDKK EFLAFSSSQL++NSVWMFASR G TA DIR WMGDF+ IKNV KY+
Sbjct: 277 STLRKGFVIGDKKIEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGDFSQIKNVAKYA 336

Query: 182 ARLGQSFGSSRESLTILKDEIEYIPDIETEDKKYNFSDGIGKISAD 319
           ARLGQSFGSS+E+L++L+ EIE IPD++     Y FSDGIGKISAD
Sbjct: 337 ARLGQSFGSSKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISAD 382


>ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prunus persica]
           gi|462422197|gb|EMJ26460.1| hypothetical protein
           PRUPE_ppa001524mg [Prunus persica]
          Length = 808

 Score =  159 bits (401), Expect = 9e-37
 Identities = 78/106 (73%), Positives = 90/106 (84%)
 Frame = +2

Query: 2   STLRGGIVVGDKKFEFLAFSSSQLKENSVWMFASRSGCTAADIREWMGDFTDIKNVGKYS 181
           S LR GIV+G+KKFEFLAFSSSQL+ENS+WMFASR G TAADIREWMG+F  I+NV KY+
Sbjct: 128 SILRNGIVIGEKKFEFLAFSSSQLRENSMWMFASRWGLTAADIREWMGNFCHIRNVAKYA 187

Query: 182 ARLGQSFGSSRESLTILKDEIEYIPDIETEDKKYNFSDGIGKISAD 319
           ARLGQSFGSS E+L + + EIE IPD+ + D KY FSDGIGKISAD
Sbjct: 188 ARLGQSFGSSTETLNVGEHEIEVIPDVVSRDNKYVFSDGIGKISAD 233


>ref|XP_007225416.1| hypothetical protein PRUPE_ppa000562mg [Prunus persica]
           gi|462422352|gb|EMJ26615.1| hypothetical protein
           PRUPE_ppa000562mg [Prunus persica]
          Length = 1095

 Score =  157 bits (398), Expect = 2e-36
 Identities = 78/108 (72%), Positives = 92/108 (85%), Gaps = 2/108 (1%)
 Frame = +2

Query: 2   STLRGGIVVGDKKFEFLAFSSSQLKENSVWMFASRSGCTAADIREWMGDFTDIKNVGKYS 181
           STLR G+V+G+KKFEFLA SSSQL+E+SVWMFASRSG TA DIR WMGDF+DIKN  K++
Sbjct: 416 STLRNGLVIGEKKFEFLAHSSSQLREHSVWMFASRSGLTAQDIRNWMGDFSDIKNAAKHA 475

Query: 182 ARLGQSFGSSRESLTILKDEIEYIPDIETE--DKKYNFSDGIGKISAD 319
           ARLGQ+F SSRE+  + KDEIE+IPD+ETE    KY FSDGIGKISA+
Sbjct: 476 ARLGQAFSSSRETFDVGKDEIEFIPDVETETGGVKYCFSDGIGKISAE 523


>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
          Length = 775

 Score =  157 bits (398), Expect = 2e-36
 Identities = 76/106 (71%), Positives = 89/106 (83%)
 Frame = +2

Query: 2   STLRGGIVVGDKKFEFLAFSSSQLKENSVWMFASRSGCTAADIREWMGDFTDIKNVGKYS 181
           STL+ G+V+G KKFEFLAFSSSQL++NSVWMFASR G TA DIR WMGDF  I+NV KY+
Sbjct: 122 STLQNGLVIGAKKFEFLAFSSSQLRDNSVWMFASRPGLTAYDIRTWMGDFQQIRNVAKYA 181

Query: 182 ARLGQSFGSSRESLTILKDEIEYIPDIETEDKKYNFSDGIGKISAD 319
           ARLGQSFGSSRE+L++ + EI+YIPD+E     Y FSDGIGKISAD
Sbjct: 182 ARLGQSFGSSRETLSVGRHEIKYIPDVEVHGTNYVFSDGIGKISAD 227


>ref|XP_010088177.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
           gi|587841720|gb|EXB32317.1| RNA-dependent RNA polymerase
           1 [Morus notabilis]
          Length = 862

 Score =  157 bits (397), Expect = 3e-36
 Identities = 78/107 (72%), Positives = 88/107 (82%), Gaps = 2/107 (1%)
 Frame = +2

Query: 5   TLRGGIVVGDKKFEFLAFSSSQLKENSVWMFASRSGCTAADIREWMGDFTDIKNVGKYSA 184
           TLR GI++GDKKFEFLAFSSSQLKE S+WMFASR G TAADIR WMGDF DIKNV +Y+A
Sbjct: 422 TLRNGILIGDKKFEFLAFSSSQLKEGSLWMFASRDGLTAADIRNWMGDFHDIKNVARYAA 481

Query: 185 RLGQSFGSSRESLTILKDEIEYIPDIET--EDKKYNFSDGIGKISAD 319
           RLGQSFGSS E+  + +DE+E IPDIE   + K Y FSDGIGKIS D
Sbjct: 482 RLGQSFGSSHETFRVGRDEVELIPDIEVKRDGKNYCFSDGIGKISED 528