BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00028722
         (851 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD93814.1| RNA polymerase beta chain, partial (chloroplast) ...   535   e-149
gb|ABD93863.1| RNA polymerase beta chain, partial (chloroplast) ...   529   e-148
gb|ABD93811.1| RNA polymerase beta chain, partial (chloroplast) ...   515   e-143
gb|ABD93859.1| RNA polymerase beta chain, partial (chloroplast) ...   503   e-140
gb|ABD93800.1| RNA polymerase beta chain, partial (chloroplast) ...   500   e-139
gb|ABD93860.1| RNA polymerase beta chain, partial (chloroplast) ...   495   e-137
sp|Q7YJY0.1|RPOC2_CALFG RecName: Full=DNA-directed RNA polymeras...   493   e-137
ref|NP_862744.2| RNA polymerase beta'' subunit [Calycanthus flor...   493   e-137
gb|ABD93774.1| RNA polymerase beta chain, partial (chloroplast) ...   493   e-137
gb|ABD93772.1| RNA polymerase beta chain, partial (chloroplast) ...   490   e-136
gb|ABD93773.1| RNA polymerase beta chain, partial (chloroplast) ...   490   e-136
gb|ABD93810.1| RNA polymerase beta chain, partial (chloroplast) ...   488   e-135
gb|ABD93798.1| RNA polymerase beta chain, partial (chloroplast) ...   486   e-135
gb|ABD93817.1| RNA polymerase beta chain, partial (chloroplast) ...   485   e-134
gb|ABD93862.1| RNA polymerase beta chain, partial (chloroplast) ...   483   e-134
gb|ABD93747.1| RNA polymerase beta chain, partial (chloroplast) ...   481   e-133
gb|ABD93852.1| RNA polymerase beta chain, partial (chloroplast) ...   479   e-133
gb|ABD93739.1| RNA polymerase beta chain, partial (chloroplast) ...   479   e-132
ref|YP_007474526.1| RNA polymerase beta subunit-2 (chloroplast) ...   478   e-132
ref|YP_740192.1| RNA polymerase beta' subunit [Liriodendron tuli...   478   e-132

>gb|ABD93814.1| RNA polymerase beta chain, partial (chloroplast) [Cinnamomum
           camphora]
          Length = 777

 Score =  535 bits (1378), Expect = e-149
 Identities = 270/283 (95%), Positives = 270/283 (95%)
 Frame = -3

Query: 849 SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 670
           SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL
Sbjct: 145 SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 204

Query: 669 NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGXXXXXXXXXX 490
           NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTG          
Sbjct: 205 NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGKKNSKESKKL 264

Query: 489 XNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 310
            NWIYVQRITPTKKKYFV VRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG
Sbjct: 265 KNWIYVQRITPTKKKYFVSVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 324

Query: 309 NGKPIRGIYHTSLQLVRTCLVLNWNLDRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS 130
           NGKPIRGIYHTSLQLVRTCLVLNWN DRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS
Sbjct: 325 NGKPIRGIYHTSLQLVRTCLVLNWNQDRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS 384

Query: 129 IFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 1
           IFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG
Sbjct: 385 IFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 427


>gb|ABD93863.1| RNA polymerase beta chain, partial (chloroplast) [Laurus nobilis]
          Length = 760

 Score =  529 bits (1363), Expect = e-148
 Identities = 267/283 (94%), Positives = 268/283 (94%)
 Frame = -3

Query: 849 SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 670
           SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL
Sbjct: 142 SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 201

Query: 669 NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGXXXXXXXXXX 490
           NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGT           
Sbjct: 202 NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTRKKNSKESKKW 261

Query: 489 XNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 310
            NWIYVQRITPTKKKYFV VRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG
Sbjct: 262 KNWIYVQRITPTKKKYFVSVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 321

Query: 309 NGKPIRGIYHTSLQLVRTCLVLNWNLDRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS 130
           NGKPIRGIYHTSLQLVRTCLVLNWN DRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS
Sbjct: 322 NGKPIRGIYHTSLQLVRTCLVLNWNQDRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS 381

Query: 129 IFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 1
           IFYIGKRNDMA+SGLIANNGSDRTNINPFYFK RIQSFTQHQG
Sbjct: 382 IFYIGKRNDMANSGLIANNGSDRTNINPFYFKVRIQSFTQHQG 424


>gb|ABD93811.1| RNA polymerase beta chain, partial (chloroplast) [Cryptocarya
           meisneriana]
          Length = 712

 Score =  515 bits (1327), Expect = e-143
 Identities = 259/283 (91%), Positives = 263/283 (92%)
 Frame = -3

Query: 849 SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 670
           SIVKKEDLIEYRRAKEFRPKYQMKV RFFFIPEEVHILPGSSPIMVRNNS+IGVDTRIAL
Sbjct: 85  SIVKKEDLIEYRRAKEFRPKYQMKVHRFFFIPEEVHILPGSSPIMVRNNSLIGVDTRIAL 144

Query: 669 NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGXXXXXXXXXX 490
           NTRS+VGGLVRVERKKKRIELKIFSGDIYFPG TDKISRHCGILIPPGTG          
Sbjct: 145 NTRSRVGGLVRVERKKKRIELKIFSGDIYFPGETDKISRHCGILIPPGTGKKNSKEPKKL 204

Query: 489 XNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 310
            NWIY QRITPTKKKYFV VRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG
Sbjct: 205 KNWIYAQRITPTKKKYFVSVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 264

Query: 309 NGKPIRGIYHTSLQLVRTCLVLNWNLDRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS 130
           NGKPIRGIYHTSLQLVRTCLVLNWN DR+GSIEEVH SFVEVRANDLIRDFIR+DLVKSS
Sbjct: 265 NGKPIRGIYHTSLQLVRTCLVLNWNQDRNGSIEEVHVSFVEVRANDLIRDFIRMDLVKSS 324

Query: 129 IFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 1
           IFYIGKRND ASSGLI NNGSDRTNINPFYFKARIQS TQHQG
Sbjct: 325 IFYIGKRNDTASSGLIPNNGSDRTNINPFYFKARIQSLTQHQG 367


>gb|ABD93859.1| RNA polymerase beta chain, partial (chloroplast) [Hedycarya
           arborea]
          Length = 761

 Score =  503 bits (1295), Expect = e-140
 Identities = 254/283 (89%), Positives = 259/283 (91%)
 Frame = -3

Query: 849 SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 670
           SIVKKEDLIEYRRAK FRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL
Sbjct: 143 SIVKKEDLIEYRRAKGFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 202

Query: 669 NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGXXXXXXXXXX 490
           NTRS+VGGLVRVERKKKRIELKIFSGDI+FPG TDKISRH GILIPPGTG          
Sbjct: 203 NTRSRVGGLVRVERKKKRIELKIFSGDIHFPGETDKISRHFGILIPPGTGKKKTKESKKL 262

Query: 489 XNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 310
            NWIY QRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLR+VNYILYG
Sbjct: 263 KNWIYAQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRVVNYILYG 322

Query: 309 NGKPIRGIYHTSLQLVRTCLVLNWNLDRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS 130
           NGKPIRGIYHTSLQLVRTCLVLNW  DR+GSIEEVHASFVEVRANDLIRDF+RIDLV S 
Sbjct: 323 NGKPIRGIYHTSLQLVRTCLVLNWKQDRNGSIEEVHASFVEVRANDLIRDFLRIDLVNSP 382

Query: 129 IFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 1
           I YIGKRND ASSGLI NNGSDRTNINPFYFKARI S TQHQG
Sbjct: 383 ILYIGKRNDTASSGLIPNNGSDRTNINPFYFKARIPSLTQHQG 425


>gb|ABD93800.1| RNA polymerase beta chain, partial (chloroplast) [Hortonia
            floribunda]
          Length = 790

 Score =  500 bits (1287), Expect = e-139
 Identities = 253/283 (89%), Positives = 258/283 (91%)
 Frame = -3

Query: 849  SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 670
            SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGS PIMVRNNSIIGVDTRIAL
Sbjct: 158  SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSLPIMVRNNSIIGVDTRIAL 217

Query: 669  NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGXXXXXXXXXX 490
            NTRS+VGGLVRVERKKKRIELKIF GDI+FP  TDKISRHCGILIPPGTG          
Sbjct: 218  NTRSRVGGLVRVERKKKRIELKIFPGDIHFPEKTDKISRHCGILIPPGTGKKNSKESKKL 277

Query: 489  XNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 310
             NWIY QRITPTKKKYFV VRPVVTYEIADGINLATLFPQDPLQERDNVQLR+VNYILYG
Sbjct: 278  KNWIYAQRITPTKKKYFVSVRPVVTYEIADGINLATLFPQDPLQERDNVQLRVVNYILYG 337

Query: 309  NGKPIRGIYHTSLQLVRTCLVLNWNLDRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS 130
            NGKPIRGI HTSLQLVRTCLVLNWN DR+ SIEEVHASFVEVRANDLIRDF+RIDLVKS 
Sbjct: 338  NGKPIRGISHTSLQLVRTCLVLNWNQDRNCSIEEVHASFVEVRANDLIRDFLRIDLVKSP 397

Query: 129  IFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 1
            I YIGKRNDMASSGLI NNGSDRTNINPFYFKARI S TQHQG
Sbjct: 398  ILYIGKRNDMASSGLIPNNGSDRTNINPFYFKARIPSLTQHQG 440


>gb|ABD93860.1| RNA polymerase beta chain, partial (chloroplast) [Peumus boldus]
          Length = 758

 Score =  495 bits (1275), Expect = e-137
 Identities = 255/285 (89%), Positives = 260/285 (91%), Gaps = 2/285 (0%)
 Frame = -3

Query: 849 SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 670
           SIVKKEDLIE   AKEFR KYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL
Sbjct: 141 SIVKKEDLIE---AKEFRTKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 197

Query: 669 NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGXXXXXXXXXX 490
           NTRS+VGGLVRVERKKKRIELKIFSGDI+FPG TDKISRHCGILIPPGTG          
Sbjct: 198 NTRSRVGGLVRVERKKKRIELKIFSGDIHFPGETDKISRHCGILIPPGTGKKNSKESKKW 257

Query: 489 XNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 310
            NWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLR+V+YILYG
Sbjct: 258 KNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRVVHYILYG 317

Query: 309 NGKPIRGIYHTSLQLVRTCLVLNWNLDRDG--SIEEVHASFVEVRANDLIRDFIRIDLVK 136
           NGKPIRGIYHTSLQLVRTCLVLNWN DR G  SIEEVHASFVEVRANDLIRDFIRIDLVK
Sbjct: 318 NGKPIRGIYHTSLQLVRTCLVLNWNQDRKGSISIEEVHASFVEVRANDLIRDFIRIDLVK 377

Query: 135 SSIFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 1
           S IFYIGKRND ASSGLI NNGSDRTNINPFYFKAR+ S TQHQG
Sbjct: 378 SPIFYIGKRNDTASSGLIPNNGSDRTNINPFYFKARLPSLTQHQG 422


>sp|Q7YJY0.1|RPOC2_CALFG RecName: Full=DNA-directed RNA polymerase subunit beta''; AltName:
            Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
            subunit beta''; Short=RNA polymerase subunit beta''
            (chloroplast) [Calycanthus floridus var. glaucus]
            gi|32399369|emb|CAD28711.1| RNA polymerase beta'
            subunit-2 [Calycanthus floridus var. glaucus]
          Length = 1377

 Score =  493 bits (1269), Expect = e-137
 Identities = 248/283 (87%), Positives = 257/283 (90%)
 Frame = -3

Query: 849  SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 670
            SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILP SSP+MVRNNSIIGV+TRIAL
Sbjct: 641  SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPASSPVMVRNNSIIGVNTRIAL 700

Query: 669  NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGXXXXXXXXXX 490
            NTRS+VGGLVRVERKKKRIELKIFSGDI+FPG TDKISRH GILIPPGTG          
Sbjct: 701  NTRSRVGGLVRVERKKKRIELKIFSGDIHFPGETDKISRHSGILIPPGTGKKNVKESKKW 760

Query: 489  XNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 310
             NWIYVQRITPTKKKYFVLVRPVVTYEIADGINL TLFPQDPLQERDNVQLR+VNYILYG
Sbjct: 761  KNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLETLFPQDPLQERDNVQLRVVNYILYG 820

Query: 309  NGKPIRGIYHTSLQLVRTCLVLNWNLDRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS 130
            NGKPIRGI HTSLQLVRTCLVLNW+ DR+GSIEEVHASFVEVRAN LIRDF++IDLVKS 
Sbjct: 821  NGKPIRGISHTSLQLVRTCLVLNWDQDRNGSIEEVHASFVEVRANGLIRDFLKIDLVKSP 880

Query: 129  IFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 1
            I Y GKRND  SSG I NNGSDRTNINPFYFKARIQS TQHQG
Sbjct: 881  ILYSGKRNDTTSSGFIPNNGSDRTNINPFYFKARIQSLTQHQG 923


>ref|NP_862744.2| RNA polymerase beta'' subunit [Calycanthus floridus var. glaucus]
          Length = 1373

 Score =  493 bits (1269), Expect = e-137
 Identities = 248/283 (87%), Positives = 257/283 (90%)
 Frame = -3

Query: 849  SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 670
            SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILP SSP+MVRNNSIIGV+TRIAL
Sbjct: 637  SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPASSPVMVRNNSIIGVNTRIAL 696

Query: 669  NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGXXXXXXXXXX 490
            NTRS+VGGLVRVERKKKRIELKIFSGDI+FPG TDKISRH GILIPPGTG          
Sbjct: 697  NTRSRVGGLVRVERKKKRIELKIFSGDIHFPGETDKISRHSGILIPPGTGKKNVKESKKW 756

Query: 489  XNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 310
             NWIYVQRITPTKKKYFVLVRPVVTYEIADGINL TLFPQDPLQERDNVQLR+VNYILYG
Sbjct: 757  KNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLETLFPQDPLQERDNVQLRVVNYILYG 816

Query: 309  NGKPIRGIYHTSLQLVRTCLVLNWNLDRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS 130
            NGKPIRGI HTSLQLVRTCLVLNW+ DR+GSIEEVHASFVEVRAN LIRDF++IDLVKS 
Sbjct: 817  NGKPIRGISHTSLQLVRTCLVLNWDQDRNGSIEEVHASFVEVRANGLIRDFLKIDLVKSP 876

Query: 129  IFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 1
            I Y GKRND  SSG I NNGSDRTNINPFYFKARIQS TQHQG
Sbjct: 877  ILYSGKRNDTTSSGFIPNNGSDRTNINPFYFKARIQSLTQHQG 919


>gb|ABD93774.1| RNA polymerase beta chain, partial (chloroplast) [Idiospermum
            australiense]
          Length = 851

 Score =  493 bits (1269), Expect = e-137
 Identities = 249/283 (87%), Positives = 256/283 (90%)
 Frame = -3

Query: 849  SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 670
            SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL
Sbjct: 183  SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 242

Query: 669  NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGXXXXXXXXXX 490
            NTRS+VGGLVRVERKKKRIELKIFSGDI+FPG TDKISRH GILIPPGTG          
Sbjct: 243  NTRSRVGGLVRVERKKKRIELKIFSGDIHFPGETDKISRHSGILIPPGTGKKKFKESKKW 302

Query: 489  XNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 310
             NWIYVQRITPTKKKYFVLVRPVVTYEIADGINL TLFPQDPLQERDNVQLR+VNYILYG
Sbjct: 303  KNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLETLFPQDPLQERDNVQLRVVNYILYG 362

Query: 309  NGKPIRGIYHTSLQLVRTCLVLNWNLDRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS 130
            NGK IRGIYHTSLQLVRTCLVLNW+ DR+GSIEEVHASFVEVRAN LIRDFI++DL KS 
Sbjct: 363  NGKTIRGIYHTSLQLVRTCLVLNWDQDRNGSIEEVHASFVEVRANGLIRDFIKMDLAKSP 422

Query: 129  IFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 1
            I Y GKRND  SSG I NNGSDRTNIN FYFKARIQS TQHQG
Sbjct: 423  ILYSGKRNDTTSSGFIPNNGSDRTNINSFYFKARIQSLTQHQG 465


>gb|ABD93772.1| RNA polymerase beta chain, partial (chloroplast) [Calycanthus
            floridus]
          Length = 861

 Score =  490 bits (1262), Expect = e-136
 Identities = 247/283 (87%), Positives = 256/283 (90%)
 Frame = -3

Query: 849  SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 670
            SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILP SSP+MVRNNSIIGV+TRIAL
Sbjct: 191  SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPASSPVMVRNNSIIGVNTRIAL 250

Query: 669  NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGXXXXXXXXXX 490
            NTRS+VGGLVRVERKKK IELKIFSGDI+FPG TDKISRH GILIPPGTG          
Sbjct: 251  NTRSRVGGLVRVERKKKGIELKIFSGDIHFPGETDKISRHSGILIPPGTGKKNVKESKKW 310

Query: 489  XNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 310
             NWIYVQRITPTKKKYFVLVRPVVTYEIADGINL TLFPQDPLQERDNVQLR+VNYILYG
Sbjct: 311  KNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLETLFPQDPLQERDNVQLRVVNYILYG 370

Query: 309  NGKPIRGIYHTSLQLVRTCLVLNWNLDRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS 130
            NGKPIRGI HTSLQLVRTCLVLNW+ DR+GSIEEVHASFVEVRAN LIRDF++IDLVKS 
Sbjct: 371  NGKPIRGISHTSLQLVRTCLVLNWDQDRNGSIEEVHASFVEVRANGLIRDFLKIDLVKSP 430

Query: 129  IFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 1
            I Y GKRND  SSG I NNGSDRTNINPFYFKARIQS TQHQG
Sbjct: 431  ILYSGKRNDTTSSGFIPNNGSDRTNINPFYFKARIQSLTQHQG 473


>gb|ABD93773.1| RNA polymerase beta chain, partial (chloroplast) [Chimonanthus
            praecox]
          Length = 857

 Score =  490 bits (1261), Expect = e-136
 Identities = 246/283 (86%), Positives = 256/283 (90%)
 Frame = -3

Query: 849  SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 670
            SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILP SSP+MVRNNSIIGVDTRIAL
Sbjct: 191  SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPASSPVMVRNNSIIGVDTRIAL 250

Query: 669  NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGXXXXXXXXXX 490
            NTRS+VGGLVRVERKKKRIELKIFSGDI+FPG TDKISRH GILIPPGTG          
Sbjct: 251  NTRSRVGGLVRVERKKKRIELKIFSGDIHFPGETDKISRHSGILIPPGTGKKNVKESKKL 310

Query: 489  XNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 310
             NWIYVQRITPTKKKYFVLVRPVVTY I DGINL TLFPQDPLQERDNVQLR+VN+ILYG
Sbjct: 311  KNWIYVQRITPTKKKYFVLVRPVVTYVIGDGINLETLFPQDPLQERDNVQLRVVNHILYG 370

Query: 309  NGKPIRGIYHTSLQLVRTCLVLNWNLDRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS 130
            NGKPIRGI HTSLQLVRTCLVLNW+ DR+GSIEEVHASFVEVRAN LIRDF+++DLVKS 
Sbjct: 371  NGKPIRGISHTSLQLVRTCLVLNWDQDRNGSIEEVHASFVEVRANGLIRDFLKMDLVKSP 430

Query: 129  IFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 1
            I YIGKRND  SSG I NNGSDRTNINPFYFKARIQS TQHQG
Sbjct: 431  ILYIGKRNDTTSSGFIPNNGSDRTNINPFYFKARIQSLTQHQG 473


>gb|ABD93810.1| RNA polymerase beta chain, partial (chloroplast) [Doryphora
           sassafras]
          Length = 759

 Score =  488 bits (1256), Expect = e-135
 Identities = 249/283 (87%), Positives = 255/283 (90%)
 Frame = -3

Query: 849 SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 670
           SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVH LPG  PIMVRN SIIGVDTRIAL
Sbjct: 91  SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHFLPGFLPIMVRNKSIIGVDTRIAL 150

Query: 669 NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGXXXXXXXXXX 490
           NTRS+VGGLVRVERKKK+IELKIFSGDI+FPG TDKISRHCGILIPP T           
Sbjct: 151 NTRSRVGGLVRVERKKKKIELKIFSGDIHFPGETDKISRHCGILIPPVTLKKNSKESKIL 210

Query: 489 XNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 310
            N IYVQRITPTKKKYFV  RPVVTYEIADGINLATLFPQDPLQERDNVQLR+VNYILYG
Sbjct: 211 KNGIYVQRITPTKKKYFVSFRPVVTYEIADGINLATLFPQDPLQERDNVQLRVVNYILYG 270

Query: 309 NGKPIRGIYHTSLQLVRTCLVLNWNLDRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS 130
           NGKPI+GI HTSLQLVRTCLVLNWN DR+GSIEEVHASFVEVRANDLIRDFIRIDLVKS 
Sbjct: 271 NGKPIQGISHTSLQLVRTCLVLNWNQDRNGSIEEVHASFVEVRANDLIRDFIRIDLVKSP 330

Query: 129 IFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 1
           I YIGKRND ASSGLI NNGSD TNINPFYFKARIQSFTQHQG
Sbjct: 331 ILYIGKRNDTASSGLIPNNGSDHTNINPFYFKARIQSFTQHQG 373


>gb|ABD93798.1| RNA polymerase beta chain, partial (chloroplast) [Atherosperma
            moschatum]
          Length = 857

 Score =  486 bits (1252), Expect = e-135
 Identities = 248/283 (87%), Positives = 255/283 (90%)
 Frame = -3

Query: 849  SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 670
            SIVKKEDLIEYR AKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL
Sbjct: 189  SIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 248

Query: 669  NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGXXXXXXXXXX 490
            NTRS+VGGLVRVERKKK+IELKIFSGDI+FPG TDKISRHCGILIPP T           
Sbjct: 249  NTRSRVGGLVRVERKKKKIELKIFSGDIHFPGETDKISRHCGILIPPVTLKKNSKESKIF 308

Query: 489  XNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 310
             N IYVQRITPTKKKYFV  RPVV YEIADGINLATLFPQDPLQERDNVQLR+VNYILYG
Sbjct: 309  KNRIYVQRITPTKKKYFVSFRPVVAYEIADGINLATLFPQDPLQERDNVQLRVVNYILYG 368

Query: 309  NGKPIRGIYHTSLQLVRTCLVLNWNLDRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS 130
            NGKPIRGI HTSLQLVR C VLNWN D++GSIE+VHASFVEVRANDLIRDFIRIDLVKS 
Sbjct: 369  NGKPIRGISHTSLQLVRACFVLNWNQDQNGSIEDVHASFVEVRANDLIRDFIRIDLVKSP 428

Query: 129  IFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 1
            I YIGKRND ASSGLI NNGSDRTNINPFYFKARIQS TQHQG
Sbjct: 429  ILYIGKRNDTASSGLIPNNGSDRTNINPFYFKARIQSLTQHQG 471


>gb|ABD93817.1| RNA polymerase beta chain, partial (chloroplast) [Daphnandra
            micrantha]
          Length = 824

 Score =  485 bits (1249), Expect = e-134
 Identities = 248/283 (87%), Positives = 255/283 (90%)
 Frame = -3

Query: 849  SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 670
            SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL
Sbjct: 162  SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 221

Query: 669  NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGXXXXXXXXXX 490
            NTRS+VGGLVRVERKKK+IELKIFSGDI+FPG TDKISRHCGILIPP T           
Sbjct: 222  NTRSRVGGLVRVERKKKKIELKIFSGDIHFPGETDKISRHCGILIPPVTLKKNSKESKIL 281

Query: 489  XNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 310
             NWIYVQRITPTKKKYFV  RPVVTYEIADGINLAT FPQDPLQERDNVQLR+VNYILYG
Sbjct: 282  KNWIYVQRITPTKKKYFVSFRPVVTYEIADGINLATFFPQDPLQERDNVQLRVVNYILYG 341

Query: 309  NGKPIRGIYHTSLQLVRTCLVLNWNLDRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS 130
            NGKPIR I  TSLQLVRTCLVLNWN D++GSIEEV+ASFVEVRANDLIRDFIRIDLVKS 
Sbjct: 342  NGKPIREISRTSLQLVRTCLVLNWNQDQNGSIEEVNASFVEVRANDLIRDFIRIDLVKSP 401

Query: 129  IFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 1
            I  IGKRNDMASSGLI N GSD TNINPFYFKARIQS TQHQG
Sbjct: 402  ILCIGKRNDMASSGLIPNKGSDHTNINPFYFKARIQSLTQHQG 444


>gb|ABD93862.1| RNA polymerase beta chain, partial (chloroplast) [Gyrocarpus
           americanus]
          Length = 712

 Score =  483 bits (1242), Expect = e-134
 Identities = 244/285 (85%), Positives = 256/285 (89%), Gaps = 2/285 (0%)
 Frame = -3

Query: 849 SIVKKEDLIEYRRAKEFRPKYQM--KVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRI 676
           SIVKKEDLIEYRRAKEFRPKYQM  KVDRFFFIPEEVHILPGSSPI+VRNNSIIG+DT+I
Sbjct: 91  SIVKKEDLIEYRRAKEFRPKYQMQMKVDRFFFIPEEVHILPGSSPILVRNNSIIGIDTQI 150

Query: 675 ALNTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGXXXXXXXX 496
            LNTRS+ GGLVRVE+KKKRIELKIFSGDI+FPG TDKISRHCGILIPPGTG        
Sbjct: 151 TLNTRSRAGGLVRVEKKKKRIELKIFSGDIHFPGETDKISRHCGILIPPGTGKKNSTKSK 210

Query: 495 XXXNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYIL 316
              NW YVQRITPTKKK FVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLR+VNY+L
Sbjct: 211 KLKNWTYVQRITPTKKKDFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRVVNYLL 270

Query: 315 YGNGKPIRGIYHTSLQLVRTCLVLNWNLDRDGSIEEVHASFVEVRANDLIRDFIRIDLVK 136
           YGNGK I+G YH SLQLVRTCLVLNWN D++GSIEE HASFVEVR NDLIRDFIRIDLVK
Sbjct: 271 YGNGKSIQGSYHISLQLVRTCLVLNWNQDQNGSIEEGHASFVEVRTNDLIRDFIRIDLVK 330

Query: 135 SSIFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 1
           S + YIGKRND ASSGLIANNGSDRTNIN FYFKARIQS TQHQG
Sbjct: 331 SPMLYIGKRNDTASSGLIANNGSDRTNINSFYFKARIQSLTQHQG 375


>gb|ABD93747.1| RNA polymerase beta chain, partial (chloroplast) [Liriodendron
            chinense]
          Length = 839

 Score =  481 bits (1239), Expect = e-133
 Identities = 245/283 (86%), Positives = 253/283 (89%)
 Frame = -3

Query: 849  SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 670
            SIVKKEDLIEYR AKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL
Sbjct: 171  SIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 230

Query: 669  NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGXXXXXXXXXX 490
            NTRS+VGGLVRVERKKK+IELKIFSGDI+FPG TDKISRH GILIPPGTG          
Sbjct: 231  NTRSRVGGLVRVERKKKKIELKIFSGDIHFPGETDKISRHSGILIPPGTGKKNSKESKKL 290

Query: 489  XNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 310
             NWIYVQRITPTKKKYFV VRPVVTYEIADGINL TLFPQD LQERDNVQLR+VNYILYG
Sbjct: 291  KNWIYVQRITPTKKKYFVSVRPVVTYEIADGINLGTLFPQDLLQERDNVQLRVVNYILYG 350

Query: 309  NGKPIRGIYHTSLQLVRTCLVLNWNLDRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS 130
            NGKPIRGIYHTS+QLVRTCLVLNW+ DR+GSIEEVHASFVEV ANDLIRDFIRIDLVKS 
Sbjct: 351  NGKPIRGIYHTSIQLVRTCLVLNWDQDRNGSIEEVHASFVEVGANDLIRDFIRIDLVKSP 410

Query: 129  IFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 1
            I YIGKRND   SGLI +N SDRTNIN FY K RIQS TQHQG
Sbjct: 411  ISYIGKRNDTTGSGLIPDNESDRTNINTFYSKTRIQSLTQHQG 453


>gb|ABD93852.1| RNA polymerase beta chain, partial (chloroplast) [Degeneria
           vitiensis]
          Length = 765

 Score =  479 bits (1234), Expect = e-133
 Identities = 244/283 (86%), Positives = 253/283 (89%)
 Frame = -3

Query: 849 SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 670
           SIVKKEDLIEYR AKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIG+DTRIAL
Sbjct: 138 SIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGIDTRIAL 197

Query: 669 NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGXXXXXXXXXX 490
           NTRS+VGGLVRVERKKK+IELKIFSGDI+FPG TDKISRH GILIPPGTG          
Sbjct: 198 NTRSRVGGLVRVERKKKKIELKIFSGDIHFPGETDKISRHSGILIPPGTGKKNAKESKKL 257

Query: 489 XNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 310
            NWIYVQRITPTKKKYFV VRPVVTYEIADGINLA LFPQD LQERDNVQLR+VNYILYG
Sbjct: 258 KNWIYVQRITPTKKKYFVSVRPVVTYEIADGINLAMLFPQDLLQERDNVQLRVVNYILYG 317

Query: 309 NGKPIRGIYHTSLQLVRTCLVLNWNLDRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS 130
           N KPIRGIYHTS+QLVRTCLVLNW+ DR+GSIEEVHASFVEVRANDLIR FIRIDL KS 
Sbjct: 318 NRKPIRGIYHTSIQLVRTCLVLNWDQDRNGSIEEVHASFVEVRANDLIRYFIRIDLAKSP 377

Query: 129 IFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 1
           I YIGKRND A SG I +NGSDRTNIN FY KARIQS TQHQG
Sbjct: 378 ILYIGKRNDTAGSGWIPDNGSDRTNINTFYSKARIQSLTQHQG 420


>gb|ABD93739.1| RNA polymerase beta chain, partial (chloroplast) [Sarcandra
            chloranthoides]
          Length = 849

 Score =  479 bits (1233), Expect = e-132
 Identities = 245/283 (86%), Positives = 255/283 (90%)
 Frame = -3

Query: 849  SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 670
            SIVKKEDLIEYR AKEFRPKYQMKVDRFFFIPEEVHILPGSS IMVRNNSIIGVDTRIAL
Sbjct: 174  SIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRIAL 233

Query: 669  NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGXXXXXXXXXX 490
            NTRS+VGGLVRVERKKKRIELKIFSGDI+FPG TDKISRH GILIPPGTG          
Sbjct: 234  NTRSRVGGLVRVERKKKRIELKIFSGDIHFPGETDKISRHSGILIPPGTGKKNPKESKNL 293

Query: 489  XNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 310
             NWIYVQ+ITPTKKKYFVLVRPVVTYEIADGINLATLFPQD LQERDNVQLR+VNYILYG
Sbjct: 294  KNWIYVQQITPTKKKYFVLVRPVVTYEIADGINLATLFPQDLLQERDNVQLRVVNYILYG 353

Query: 309  NGKPIRGIYHTSLQLVRTCLVLNWNLDRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS 130
            NGKPIRGI HTS+QLVRTCLVLNW+ DR+GSIEEVHASFVEVRAN LIRDFIRI LVKS 
Sbjct: 354  NGKPIRGISHTSIQLVRTCLVLNWDQDRNGSIEEVHASFVEVRANALIRDFIRIYLVKSP 413

Query: 129  IFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 1
            I Y GKRND ASSGLI +N SDRTN+NPF FKAR+QS TQHQG
Sbjct: 414  ISYTGKRNDTASSGLIPDNASDRTNLNPFDFKARVQSLTQHQG 456


>ref|YP_007474526.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia grandiflora]
            gi|372862833|gb|AEX98909.1| RNA polymerase beta subunit-2
            (chloroplast) [Magnolia grandiflora]
            gi|372863003|gb|AEX99077.1| RNA polymerase beta subunit-2
            (chloroplast) [Magnolia grandiflora]
          Length = 1382

 Score =  478 bits (1230), Expect = e-132
 Identities = 245/283 (86%), Positives = 252/283 (89%)
 Frame = -3

Query: 849  SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 670
            SIVKKEDLIEYR AKEFRPKYQMKVDRFFFIPEEVHILPGSS IMVRNNSIIGVDTRIAL
Sbjct: 639  SIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRIAL 698

Query: 669  NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGXXXXXXXXXX 490
            NTRS+VGGLVRVERKKKRIELKIFSGDI+F G TDKISRH GILIPPGTG          
Sbjct: 699  NTRSRVGGLVRVERKKKRIELKIFSGDIHFTGETDKISRHSGILIPPGTGKRNSKESKKW 758

Query: 489  XNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 310
             NWIYVQRITPTKKKYFV VRPVVTYEIADGINL TLFPQD LQERDNVQLR+VNYILYG
Sbjct: 759  KNWIYVQRITPTKKKYFVSVRPVVTYEIADGINLGTLFPQDLLQERDNVQLRVVNYILYG 818

Query: 309  NGKPIRGIYHTSLQLVRTCLVLNWNLDRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS 130
            NGKPIRGIYHTS+QLVRTCLVLNW+ DR+GSIEEVHASFVEV ANDLIRDFIRIDLVKS 
Sbjct: 819  NGKPIRGIYHTSIQLVRTCLVLNWDQDRNGSIEEVHASFVEVGANDLIRDFIRIDLVKSP 878

Query: 129  IFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 1
            I YIGKRND A SGLI +N SDRTNIN FY K RIQS TQHQG
Sbjct: 879  ISYIGKRNDTAGSGLIPDNESDRTNINTFYSKTRIQSLTQHQG 921


>ref|YP_740192.1| RNA polymerase beta' subunit [Liriodendron tulipifera]
            gi|122239950|sp|Q0G9M9.1|RPOC2_LIRTU RecName:
            Full=DNA-directed RNA polymerase subunit beta''; AltName:
            Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
            subunit beta''; Short=RNA polymerase subunit beta''
            (chloroplast) [Liriodendron tulipifera]
            gi|113200984|gb|ABI32499.1| RNA polymerase beta' subunit
            [Liriodendron tulipifera]
          Length = 1382

 Score =  478 bits (1230), Expect = e-132
 Identities = 243/283 (85%), Positives = 252/283 (89%)
 Frame = -3

Query: 849  SIVKKEDLIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 670
            SIVKKEDLIEYR AKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL
Sbjct: 639  SIVKKEDLIEYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIAL 698

Query: 669  NTRSQVGGLVRVERKKKRIELKIFSGDIYFPGATDKISRHCGILIPPGTGXXXXXXXXXX 490
            NTRS+VGGLVRVERKKK+IELKIFSGDI+FPG TDKISRH GILIPPGTG          
Sbjct: 699  NTRSRVGGLVRVERKKKKIELKIFSGDIHFPGETDKISRHSGILIPPGTGKKNSKESKKW 758

Query: 489  XNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLATLFPQDPLQERDNVQLRIVNYILYG 310
             NWIYVQRITPTKKKYFV VRPVVTYEIADGINL TLFPQD LQERDNVQLR+VNYILYG
Sbjct: 759  KNWIYVQRITPTKKKYFVSVRPVVTYEIADGINLGTLFPQDLLQERDNVQLRVVNYILYG 818

Query: 309  NGKPIRGIYHTSLQLVRTCLVLNWNLDRDGSIEEVHASFVEVRANDLIRDFIRIDLVKSS 130
            NGKPIRGIYHTS+QLVRTCLVLNW+ DR+GSIEEVHASFVEV  NDLIRDFIRIDLVKS 
Sbjct: 819  NGKPIRGIYHTSIQLVRTCLVLNWDQDRNGSIEEVHASFVEVGTNDLIRDFIRIDLVKSP 878

Query: 129  IFYIGKRNDMASSGLIANNGSDRTNINPFYFKARIQSFTQHQG 1
            I YIGKR+D   SGLI +N SDRTNIN FY K RIQS TQHQG
Sbjct: 879  ISYIGKRDDTTGSGLIPDNESDRTNINTFYSKTRIQSLTQHQG 921