BLASTX nr result
ID: Cinnamomum23_contig00028643
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00028643
(398 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010929840.1| PREDICTED: protein PRD1 [Elaeis guineensis] 92 6e-19
ref|XP_008775314.1| PREDICTED: LOW QUALITY PROTEIN: protein PRD1... 89 6e-18
ref|XP_010278448.1| PREDICTED: protein PRD1 isoform X1 [Nelumbo ... 87 8e-18
ref|XP_010278449.1| PREDICTED: protein PRD1 isoform X2 [Nelumbo ... 87 8e-18
ref|XP_008659889.1| PREDICTED: LOW QUALITY PROTEIN: protein PRD1... 79 6e-15
gb|AFW87709.1| hypothetical protein ZEAMMB73_320319 [Zea mays] 79 6e-15
ref|XP_012702864.1| PREDICTED: protein PRD1 [Setaria italica] 78 7e-15
ref|XP_002438828.1| hypothetical protein SORBIDRAFT_10g026800 [S... 75 8e-14
ref|XP_009399313.1| PREDICTED: protein PRD1 [Musa acuminata subs... 77 1e-13
ref|XP_002302892.2| hypothetical protein POPTR_0002s23370g [Popu... 76 1e-13
ref|XP_012571814.1| PREDICTED: protein PRD1 [Cicer arietinum] 76 1e-13
gb|EEC77052.1| hypothetical protein OsI_15436 [Oryza sativa Indi... 75 5e-13
gb|EEE60780.1| hypothetical protein OsJ_14358 [Oryza sativa Japo... 75 5e-13
emb|CAE02100.2| OSJNBa0020I02.9 [Oryza sativa Japonica Group] 75 5e-13
ref|NP_001052517.1| Os04g0347800, partial [Oryza sativa Japonica... 75 5e-13
gb|EMS50467.1| Retrovirus-related Pol polyprotein from transposo... 74 6e-13
gb|EMT02906.1| hypothetical protein F775_04500 [Aegilops tauschii] 74 6e-13
ref|XP_011042773.1| PREDICTED: protein PRD1 [Populus euphratica]... 78 8e-13
ref|XP_010239548.1| PREDICTED: protein PRD1 [Brachypodium distac... 74 8e-13
sp|O23277.3|PRD1_ARATH RecName: Full=Protein PRD1; Short=AtPRD1;... 79 9e-13
>ref|XP_010929840.1| PREDICTED: protein PRD1 [Elaeis guineensis]
Length = 1322
Score = 92.0 bits (227), Expect(2) = 6e-19
Identities = 44/65 (67%), Positives = 52/65 (80%)
Frame = +1
Query: 202 CMRCYDLCRPIHFGSPPIKLVALQCLLELLTKISDQGKNKVDELNCSVRYLQSMAAVLQD 381
C+RC+DLCR IHFGS IKLVA QCL+ELLT+ISDQ K DEL CS+RYL+SM AV +
Sbjct: 1054 CLRCHDLCRLIHFGSSLIKLVASQCLVELLTRISDQRNGKNDELRCSLRYLESMMAVTEG 1113
Query: 382 LVFCG 396
L+F G
Sbjct: 1114 LLFYG 1118
Score = 28.5 bits (62), Expect(2) = 6e-19
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 113 SMHALLEGTLEWQDFL 160
S+HA L+ T++WQDFL
Sbjct: 1026 SLHATLQETMDWQDFL 1041
>ref|XP_008775314.1| PREDICTED: LOW QUALITY PROTEIN: protein PRD1 [Phoenix dactylifera]
Length = 672
Score = 88.6 bits (218), Expect(2) = 6e-18
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = +1
Query: 202 CMRCYDLCRPIHFGSPPIKLVALQCLLELLTKISDQGKNKVDELNCSVRYLQSMAAVLQD 381
C+RC+DLCR HFGS +KLVA QCL+E LT+ISDQ +K DEL CS+RYL+SM AV +
Sbjct: 404 CLRCHDLCRLTHFGSSLVKLVASQCLVEFLTRISDQRNSKNDELRCSLRYLESMMAVTEG 463
Query: 382 LVFCG 396
L+F G
Sbjct: 464 LLFYG 468
Score = 28.5 bits (62), Expect(2) = 6e-18
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 113 SMHALLEGTLEWQDFL 160
S+HA L+ T++WQDFL
Sbjct: 376 SLHATLQETMDWQDFL 391
>ref|XP_010278448.1| PREDICTED: protein PRD1 isoform X1 [Nelumbo nucifera]
Length = 1242
Score = 87.0 bits (214), Expect(2) = 8e-18
Identities = 39/63 (61%), Positives = 51/63 (80%)
Frame = +1
Query: 202 CMRCYDLCRPIHFGSPPIKLVALQCLLELLTKISDQGKNKVDELNCSVRYLQSMAAVLQD 381
C+ C+DLCR +HFGSPP+KLVA CLLE++T I+DQ NK DEL CS+ YL+S+ +VL+
Sbjct: 971 CICCHDLCRLMHFGSPPVKLVASHCLLEMMTTITDQRHNKHDELKCSMGYLKSVMSVLEG 1030
Query: 382 LVF 390
LVF
Sbjct: 1031 LVF 1033
Score = 29.6 bits (65), Expect(2) = 8e-18
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +2
Query: 113 SMHALLEGTLEWQDFLXXXXXXXXPLSVISAC 208
S+HALL L+W FL PLS I C
Sbjct: 942 SLHALLPENLDWLSFLQSSPNGIQPLSFICIC 973
>ref|XP_010278449.1| PREDICTED: protein PRD1 isoform X2 [Nelumbo nucifera]
Length = 1020
Score = 87.0 bits (214), Expect(2) = 8e-18
Identities = 39/63 (61%), Positives = 51/63 (80%)
Frame = +1
Query: 202 CMRCYDLCRPIHFGSPPIKLVALQCLLELLTKISDQGKNKVDELNCSVRYLQSMAAVLQD 381
C+ C+DLCR +HFGSPP+KLVA CLLE++T I+DQ NK DEL CS+ YL+S+ +VL+
Sbjct: 749 CICCHDLCRLMHFGSPPVKLVASHCLLEMMTTITDQRHNKHDELKCSMGYLKSVMSVLEG 808
Query: 382 LVF 390
LVF
Sbjct: 809 LVF 811
Score = 29.6 bits (65), Expect(2) = 8e-18
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +2
Query: 113 SMHALLEGTLEWQDFLXXXXXXXXPLSVISAC 208
S+HALL L+W FL PLS I C
Sbjct: 720 SLHALLPENLDWLSFLQSSPNGIQPLSFICIC 751
>ref|XP_008659889.1| PREDICTED: LOW QUALITY PROTEIN: protein PRD1 [Zea mays]
Length = 1330
Score = 79.3 bits (194), Expect(2) = 6e-15
Identities = 39/60 (65%), Positives = 46/60 (76%)
Frame = +1
Query: 211 CYDLCRPIHFGSPPIKLVALQCLLELLTKISDQGKNKVDELNCSVRYLQSMAAVLQDLVF 390
C+DLCR +HFGSP IKL+A QCLLELLT+ISDQ EL CSV YL+S+ AV + LVF
Sbjct: 1028 CHDLCRLMHFGSPSIKLIASQCLLELLTRISDQRSCNNAELRCSVGYLKSIIAVTEGLVF 1087
Score = 27.7 bits (60), Expect(2) = 6e-15
Identities = 9/16 (56%), Positives = 15/16 (93%)
Frame = +2
Query: 113 SMHALLEGTLEWQDFL 160
S+H++LE +++WQDFL
Sbjct: 997 SLHSILEVSIDWQDFL 1012
>gb|AFW87709.1| hypothetical protein ZEAMMB73_320319 [Zea mays]
Length = 1057
Score = 79.3 bits (194), Expect(2) = 6e-15
Identities = 39/60 (65%), Positives = 46/60 (76%)
Frame = +1
Query: 211 CYDLCRPIHFGSPPIKLVALQCLLELLTKISDQGKNKVDELNCSVRYLQSMAAVLQDLVF 390
C+DLCR +HFGSP IKL+A QCLLELLT+ISDQ EL CSV YL+S+ AV + LVF
Sbjct: 755 CHDLCRLMHFGSPSIKLIASQCLLELLTRISDQRSCNNAELRCSVGYLKSIIAVTEGLVF 814
Score = 27.7 bits (60), Expect(2) = 6e-15
Identities = 9/16 (56%), Positives = 15/16 (93%)
Frame = +2
Query: 113 SMHALLEGTLEWQDFL 160
S+H++LE +++WQDFL
Sbjct: 724 SLHSILEVSIDWQDFL 739
>ref|XP_012702864.1| PREDICTED: protein PRD1 [Setaria italica]
Length = 1292
Score = 78.2 bits (191), Expect(2) = 7e-15
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +1
Query: 211 CYDLCRPIHFGSPPIKLVALQCLLELLTKISDQGKNKVDELNCSVRYLQSMAAVLQDLVF 390
C+DLCR +HFG P +KL+A QCLLELLT+ISDQ EL CSV+YL+S+ AV + LVF
Sbjct: 1028 CHDLCRLMHFGPPSVKLIASQCLLELLTRISDQRTCTQAELRCSVKYLKSIIAVTEGLVF 1087
Score = 28.5 bits (62), Expect(2) = 7e-15
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 113 SMHALLEGTLEWQDFL 160
S+H +LE +++WQDFL
Sbjct: 997 SLHTILEASIDWQDFL 1012
>ref|XP_002438828.1| hypothetical protein SORBIDRAFT_10g026800 [Sorghum bicolor]
gi|241917051|gb|EER90195.1| hypothetical protein
SORBIDRAFT_10g026800 [Sorghum bicolor]
Length = 1312
Score = 74.7 bits (182), Expect(2) = 8e-14
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = +1
Query: 211 CYDLCRPIHFGSPPIKLVALQCLLELLTKISDQGKNKVDELNCSVRYLQSMAAVLQDLVF 390
C+DLCR +HFGSP IKL+A QCLLELL +ISDQ EL CS +YL+S+ AV + L+F
Sbjct: 1007 CHDLCRLMHFGSPSIKLIASQCLLELLKRISDQRSCIDAELRCSTKYLKSIIAVTEGLLF 1066
Score = 28.5 bits (62), Expect(2) = 8e-14
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 113 SMHALLEGTLEWQDFL 160
S+H +LE +++WQDFL
Sbjct: 976 SLHTILEASIDWQDFL 991
>ref|XP_009399313.1| PREDICTED: protein PRD1 [Musa acuminata subsp. malaccensis]
Length = 1276
Score = 76.6 bits (187), Expect(2) = 1e-13
Identities = 35/65 (53%), Positives = 49/65 (75%)
Frame = +1
Query: 202 CMRCYDLCRPIHFGSPPIKLVALQCLLELLTKISDQGKNKVDELNCSVRYLQSMAAVLQD 381
C++C+DLCR +HFGS +KLV+ QCLLELLT +S+Q + K E N SVRY++S+ V +
Sbjct: 1009 CIKCHDLCRLLHFGSSIVKLVSSQCLLELLTTVSEQREKKKKEPNWSVRYVESVITVAEG 1068
Query: 382 LVFCG 396
L+F G
Sbjct: 1069 LLFYG 1073
Score = 26.2 bits (56), Expect(2) = 1e-13
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +2
Query: 113 SMHALLEGTLEWQDF 157
S+HA+ + T++WQDF
Sbjct: 981 SLHAVFQETMDWQDF 995
>ref|XP_002302892.2| hypothetical protein POPTR_0002s23370g [Populus trichocarpa]
gi|550345664|gb|EEE82165.2| hypothetical protein
POPTR_0002s23370g [Populus trichocarpa]
Length = 1343
Score = 75.9 bits (185), Expect(2) = 1e-13
Identities = 34/62 (54%), Positives = 46/62 (74%)
Frame = +1
Query: 205 MRCYDLCRPIHFGSPPIKLVALQCLLELLTKISDQGKNKVDELNCSVRYLQSMAAVLQDL 384
+ C+DLCR +HFGSPP+KLVA CLLEL+T++S+Q +EL SV YL S+ +L+ L
Sbjct: 1052 IHCHDLCRLLHFGSPPVKLVASYCLLELITRLSEQRNTSHEELKSSVAYLTSIMVILKGL 1111
Query: 385 VF 390
VF
Sbjct: 1112 VF 1113
Score = 26.6 bits (57), Expect(2) = 1e-13
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 113 SMHALLEGTLEWQDFLXXXXXXXXPLSVIS 202
S+H ++ GT++WQ+FL P+S++S
Sbjct: 1023 SIHTVVPGTVDWQNFL-NPSNRLQPISMVS 1051
>ref|XP_012571814.1| PREDICTED: protein PRD1 [Cicer arietinum]
Length = 1296
Score = 75.9 bits (185), Expect(2) = 1e-13
Identities = 34/62 (54%), Positives = 48/62 (77%)
Frame = +1
Query: 205 MRCYDLCRPIHFGSPPIKLVALQCLLELLTKISDQGKNKVDELNCSVRYLQSMAAVLQDL 384
+RC+DLCR +HFGSP +K++A LLEL +ISDQ K+K +EL C+V YL S+ ++L+ L
Sbjct: 1023 IRCHDLCRLLHFGSPVVKIIASYSLLELFNRISDQIKSKHEELKCTVGYLMSIRSILEGL 1082
Query: 385 VF 390
VF
Sbjct: 1083 VF 1084
Score = 26.6 bits (57), Expect(2) = 1e-13
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 113 SMHALLEGTLEWQDFL 160
S+HA+L G ++WQ+FL
Sbjct: 994 SLHAILPGFVDWQNFL 1009
>gb|EEC77052.1| hypothetical protein OsI_15436 [Oryza sativa Indica Group]
Length = 1778
Score = 75.1 bits (183), Expect(2) = 5e-13
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +1
Query: 211 CYDLCRPIHFGSPPIKLVALQCLLELLTKISDQGKNKVDELNCSVRYLQSMAAVLQDLVF 390
C+DLCR +HFG P+KL+A QCLLELL +ISDQ EL CS +YL+SM AV + +VF
Sbjct: 1508 CHDLCRLMHFGPSPVKLIASQCLLELLNRISDQRSCLNAELRCSAKYLKSMIAVTEGMVF 1567
Score = 25.4 bits (54), Expect(2) = 5e-13
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +2
Query: 113 SMHALLEGTLEWQDFL 160
S+ A+LE +++WQ+FL
Sbjct: 1477 SLQAILEASIDWQEFL 1492
>gb|EEE60780.1| hypothetical protein OsJ_14358 [Oryza sativa Japonica Group]
Length = 1617
Score = 75.1 bits (183), Expect(2) = 5e-13
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +1
Query: 211 CYDLCRPIHFGSPPIKLVALQCLLELLTKISDQGKNKVDELNCSVRYLQSMAAVLQDLVF 390
C+DLCR +HFG P+KL+A QCLLELL +ISDQ EL CS +YL+SM AV + +VF
Sbjct: 1347 CHDLCRLMHFGPSPVKLIASQCLLELLNRISDQRSCLNAELRCSAKYLKSMIAVTEGMVF 1406
Score = 25.4 bits (54), Expect(2) = 5e-13
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +2
Query: 113 SMHALLEGTLEWQDFL 160
S+ A+LE +++WQ+FL
Sbjct: 1316 SLQAILEASIDWQEFL 1331
>emb|CAE02100.2| OSJNBa0020I02.9 [Oryza sativa Japonica Group]
Length = 1176
Score = 75.1 bits (183), Expect(2) = 5e-13
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +1
Query: 211 CYDLCRPIHFGSPPIKLVALQCLLELLTKISDQGKNKVDELNCSVRYLQSMAAVLQDLVF 390
C+DLCR +HFG P+KL+A QCLLELL +ISDQ EL CS +YL+SM AV + +VF
Sbjct: 906 CHDLCRLMHFGPSPVKLIASQCLLELLNRISDQRSCLNAELRCSAKYLKSMIAVTEGMVF 965
Score = 25.4 bits (54), Expect(2) = 5e-13
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +2
Query: 113 SMHALLEGTLEWQDFL 160
S+ A+LE +++WQ+FL
Sbjct: 875 SLQAILEASIDWQEFL 890
>ref|NP_001052517.1| Os04g0347800, partial [Oryza sativa Japonica Group]
gi|113564088|dbj|BAF14431.1| Os04g0347800, partial
[Oryza sativa Japonica Group]
Length = 426
Score = 75.1 bits (183), Expect(2) = 5e-13
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +1
Query: 211 CYDLCRPIHFGSPPIKLVALQCLLELLTKISDQGKNKVDELNCSVRYLQSMAAVLQDLVF 390
C+DLCR +HFG P+KL+A QCLLELL +ISDQ EL CS +YL+SM AV + +VF
Sbjct: 156 CHDLCRLMHFGPSPVKLIASQCLLELLNRISDQRSCLNAELRCSAKYLKSMIAVTEGMVF 215
Score = 25.4 bits (54), Expect(2) = 5e-13
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +2
Query: 113 SMHALLEGTLEWQDFL 160
S+ A+LE +++WQ+FL
Sbjct: 125 SLQAILEASIDWQEFL 140
>gb|EMS50467.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Triticum
urartu]
Length = 1808
Score = 73.6 bits (179), Expect(2) = 6e-13
Identities = 34/59 (57%), Positives = 45/59 (76%)
Frame = +1
Query: 211 CYDLCRPIHFGSPPIKLVALQCLLELLTKISDQGKNKVDELNCSVRYLQSMAAVLQDLV 387
C+DLCR +HFG P+KL+A QCLLELLT+ISDQ EL CS +Y++S+ AV++ LV
Sbjct: 875 CHDLCRLMHFGPYPVKLIASQCLLELLTRISDQRSYLNAELRCSAQYMKSIIAVIEGLV 933
Score = 26.6 bits (57), Expect(2) = 6e-13
Identities = 8/16 (50%), Positives = 15/16 (93%)
Frame = +2
Query: 113 SMHALLEGTLEWQDFL 160
S+HA+L+ +++WQ+FL
Sbjct: 844 SLHAILDPSIDWQEFL 859
>gb|EMT02906.1| hypothetical protein F775_04500 [Aegilops tauschii]
Length = 1157
Score = 73.6 bits (179), Expect(2) = 6e-13
Identities = 34/59 (57%), Positives = 45/59 (76%)
Frame = +1
Query: 211 CYDLCRPIHFGSPPIKLVALQCLLELLTKISDQGKNKVDELNCSVRYLQSMAAVLQDLV 387
C+DLCR +HFG P+KL+A QCLLELLT+ISDQ EL CS +Y++S+ AV++ LV
Sbjct: 881 CHDLCRLMHFGPYPVKLIASQCLLELLTRISDQRSYLNAELRCSAQYMKSIIAVIEGLV 939
Score = 26.6 bits (57), Expect(2) = 6e-13
Identities = 8/16 (50%), Positives = 15/16 (93%)
Frame = +2
Query: 113 SMHALLEGTLEWQDFL 160
S+HA+L+ +++WQ+FL
Sbjct: 850 SLHAILDPSIDWQEFL 865
>ref|XP_011042773.1| PREDICTED: protein PRD1 [Populus euphratica]
gi|743898963|ref|XP_011042774.1| PREDICTED: protein PRD1
[Populus euphratica] gi|743898966|ref|XP_011042775.1|
PREDICTED: protein PRD1 [Populus euphratica]
Length = 1331
Score = 78.2 bits (191), Expect(2) = 8e-13
Identities = 35/62 (56%), Positives = 48/62 (77%)
Frame = +1
Query: 205 MRCYDLCRPIHFGSPPIKLVALQCLLELLTKISDQGKNKVDELNCSVRYLQSMAAVLQDL 384
+ C+DLCR +HFGSPP+KLVA CLLEL+T++S+Q K + +EL SV YL S+ +L+ L
Sbjct: 1060 IHCHDLCRLLHFGSPPVKLVAPYCLLELITRLSEQRKTRHEELKSSVAYLTSIMVILKGL 1119
Query: 385 VF 390
VF
Sbjct: 1120 VF 1121
Score = 21.6 bits (44), Expect(2) = 8e-13
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +2
Query: 113 SMHALLEGTLEWQDFLXXXXXXXXPLSVIS 202
S+H ++ +++WQ+FL P+S +S
Sbjct: 1031 SIHTVVPESVDWQNFL-NPSNRMQPISTVS 1059
>ref|XP_010239548.1| PREDICTED: protein PRD1 [Brachypodium distachyon]
Length = 1238
Score = 73.9 bits (180), Expect(2) = 8e-13
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = +1
Query: 187 TFCDKCMRCYDLCRPIHFGSPPIKLVALQCLLELLTKISDQGKNKVDELNCSVRYLQSMA 366
+FC + C+DLCR ++FG PIKL+A QCLLEL+T IS+Q EL CS +Y++S+
Sbjct: 965 SFCVVGISCHDLCRLMYFGPCPIKLIASQCLLELITSISEQRSYLNAELRCSAKYMKSII 1024
Query: 367 AVLQDLVF 390
AV++ LVF
Sbjct: 1025 AVVEGLVF 1032
Score = 25.8 bits (55), Expect(2) = 8e-13
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 101 VQSLSMHALLEGTLEWQDFL 160
+ L +HA+L+ ++WQ+FL
Sbjct: 938 ILQLVLHAILDPNIDWQEFL 957
>sp|O23277.3|PRD1_ARATH RecName: Full=Protein PRD1; Short=AtPRD1; AltName: Full=Protein
PUTATIVE RECOMBINATION INITIATION DEFECT 1
Length = 1330
Score = 79.3 bits (194), Expect = 9e-13
Identities = 37/64 (57%), Positives = 48/64 (75%)
Frame = +1
Query: 202 CMRCYDLCRPIHFGSPPIKLVALQCLLELLTKISDQGKNKVDELNCSVRYLQSMAAVLQD 381
C+ C++LCR +HFG+P IKL+A CLLELLT +S+Q K ++L CS YL+SM AVL
Sbjct: 1040 CIHCHNLCRLMHFGAPQIKLIASYCLLELLTGLSEQVDIKKEQLQCSSSYLKSMKAVLGG 1099
Query: 382 LVFC 393
LVFC
Sbjct: 1100 LVFC 1103