BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00028429
         (466 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010245682.1| PREDICTED: pentatricopeptide repeat-containi...   201   2e-49
ref|XP_010650212.1| PREDICTED: pentatricopeptide repeat-containi...   189   6e-46
ref|XP_010666492.1| PREDICTED: pentatricopeptide repeat-containi...   160   2e-37
ref|XP_006854251.2| PREDICTED: putative pentatricopeptide repeat...   140   4e-31
gb|ERN15718.1| hypothetical protein AMTR_s00039p00023570 [Ambore...   140   4e-31
ref|XP_003617808.1| Pentatricopeptide repeat-containing protein ...   118   1e-24
ref|XP_011032227.1| PREDICTED: pentatricopeptide repeat-containi...   118   2e-24
ref|XP_002313416.2| chlororespiratory reduction 2 family protein...   118   2e-24
ref|XP_010937492.1| PREDICTED: pentatricopeptide repeat-containi...   116   5e-24
gb|KHN41661.1| Pentatricopeptide repeat-containing protein [Glyc...   116   5e-24
ref|XP_011020921.1| PREDICTED: pentatricopeptide repeat-containi...   115   9e-24
ref|XP_010266357.1| PREDICTED: pentatricopeptide repeat-containi...   115   9e-24
ref|XP_002303738.2| hypothetical protein POPTR_0003s15840g, part...   115   1e-23
gb|AKH05211.1| chlororespiratory reduction 2 [Hypseocharis bilob...   114   2e-23
ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi...   114   2e-23
gb|AKH05205.1| chlororespiratory reduction 2, partial [Francoa s...   114   3e-23
ref|XP_011080694.1| PREDICTED: pentatricopeptide repeat-containi...   114   3e-23
ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arab...   114   3e-23
ref|XP_011624817.1| PREDICTED: pentatricopeptide repeat-containi...   114   3e-23
gb|KHN23502.1| Putative pentatricopeptide repeat-containing prot...   114   3e-23

>ref|XP_010245682.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27110-like
            [Nelumbo nucifera]
          Length = 888

 Score =  201 bits (511), Expect = 2e-49
 Identities = 101/156 (64%), Positives = 122/156 (78%), Gaps = 2/156 (1%)
 Frame = -3

Query: 464  DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
            DS+ TV NAMIDMYIRCGC++++Q+LFNSM  +N VTWNT+L G VK G S +ALKLF  
Sbjct: 564  DSHATVNNAMIDMYIRCGCMKSSQVLFNSMPHKNVVTWNTMLGGYVKRGHSAMALKLFLC 623

Query: 284  MLLEDQHKPDQVTMISIAQSSAF--SVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNG 111
            M LE+ HKPD VTMISI Q+  +      GEM+HGF LK+GLDSDTLV NSL+D+YAKNG
Sbjct: 624  MQLENMHKPDLVTMISIIQACTYISGGRGGEMVHGFALKLGLDSDTLVANSLVDAYAKNG 683

Query: 110  SINNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
             I  A SLF+QM   RDQ+SWNVMIA CG+NG+G+E
Sbjct: 684  LIIEARSLFDQMDRLRDQSSWNVMIAACGVNGKGEE 719



 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 48/155 (30%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 SYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKM 282
           S V +VN++I MYI+ G ++  + +F+    ++ ++WN+++ G  + G  V A +L+  M
Sbjct: 257 SDVPIVNSLISMYIKVGRLDLGRQVFDDTPKKDIISWNSMITGYARSGYWVEAFELYISM 316

Query: 281 LLEDQHKPDQVTMISIAQS--SAFSVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGS 108
              +   P +VT + +A +   A ++  G+ IHG++++ GL SD  +  S++D Y+K G+
Sbjct: 317 RKFENLDPSRVTFLGLALACGQAHNLDLGKTIHGYLIRSGLMSDVRLGTSIVDMYSKCGA 376

Query: 107 INNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
           +  A S+FE+    +   SWN ++AG   NG   E
Sbjct: 377 VKFARSVFEEDLPEKSLISWNSLLAGYSQNGYNHE 411



 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 2/147 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           D  + +  AM+D Y +C  IE A  +FN +   + VTWN ++ G V    +   + LF +
Sbjct: 463 DGDIVLGTAMVDAYGKCSDIEAATSVFNCIQNPSAVTWNVMISGYVLNRHAEQGIPLFLE 522

Query: 284 MLLEDQHKPDQVTMISIAQSSAF--SVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNG 111
           ML  +   PD +TM+ + QS     S+  G M+HG+ L  G DS   V N++ID Y + G
Sbjct: 523 MLNSNVF-PDSITMVMLFQSCGELGSLKQGSMLHGYCLSKGFDSHATVNNAMIDMYIRCG 581

Query: 110 SINNAWSLFEQMGHSRDQTSWNVMIAG 30
            + ++  LF  M H ++  +WN M+ G
Sbjct: 582 CMKSSQVLFNSMPH-KNVVTWNTMLGG 607



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 43/158 (27%), Positives = 89/158 (56%), Gaps = 5/158 (3%)
 Frame = -3

Query: 461 SYVTVVNAMIDMYIRCGCIENAQLLFNSMIM-RNTVTWNTILCGSVKMGLSVIALKLFRK 285
           S V +  +++DMY +CG ++ A+ +F   +  ++ ++WN++L G  + G +  A+ LF++
Sbjct: 359 SDVRLGTSIVDMYSKCGAVKFARSVFEEDLPEKSLISWNSLLAGYSQNGYNHEAVLLFQQ 418

Query: 284 MLLEDQHKPDQVTMISI--AQSSAFSVAHGEMIHGFVLKIGL--DSDTLVTNSLIDSYAK 117
           M ++   K D  T+ ++  A +++  +     IH  ++K GL  D D ++  +++D+Y K
Sbjct: 419 MFVDANLKLDAFTIANVVPAYANSADLQGVRSIHSIIVKNGLELDGDIVLGTAMVDAYGK 478

Query: 116 NGSINNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
              I  A S+F  +  +    +WNVMI+G  +N   ++
Sbjct: 479 CSDIEAATSVFNCI-QNPSAVTWNVMISGYVLNRHAEQ 515



 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
 Frame = -3

Query: 461 SYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKM 282
           S+V + N ++ MY +   I++A  +F  + +R+  T+N+++CG    G    A+ +F +M
Sbjct: 156 SWVIIGNCLVFMYSKLSRIQDAFRVFEEIPIRDYTTYNSLMCGFGSNGFYEEAVVIFDQM 215

Query: 281 LLEDQHKPDQVTMISIAQSSA---FSVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNG 111
           L  D      V  IS A  +     S+  G +IH  V+K GL SD  + NSLI  Y K G
Sbjct: 216 LESDFF--PNVASISYAIRACGELGSLDRGSLIHDCVIKNGLYSDVPIVNSLISMYIKVG 273

Query: 110 SINNAWSLFEQMGHSRDQTSWNVMIAGCGING 15
            ++    +F+     +D  SWN MI G   +G
Sbjct: 274 RLDLGRQVFDDT-PKKDIISWNSMITGYARSG 304



 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
 Frame = -3

Query: 392 LLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLLEDQHKPDQVTMISIAQSSAFS 213
           LL  S    NT++WN ++           +L LF+K+LL    KPD  T   + +  A  
Sbjct: 77  LLVTSFFRNNTISWNNLIQEFTSTRRFSQSLFLFKKLLLTPFWKPDCWTFPPLLKCCAAL 136

Query: 212 VAH--GEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSINNAWSLFEQMGHSRDQTSWNVM 39
            A   G  +HG+++K G  S  ++ N L+  Y+K   I +A+ +FE++   RD T++N +
Sbjct: 137 SATNTGLGLHGYLIKSGFRSWVIIGNCLVFMYSKLSRIQDAFRVFEEI-PIRDYTTYNSL 195

Query: 38  IAGCGINGQGQE 3
           + G G NG  +E
Sbjct: 196 MCGFGSNGFYEE 207


>ref|XP_010650212.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
           gi|731390046|ref|XP_010650213.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 800

 Score =  189 bits (480), Expect = 6e-46
 Identities = 92/154 (59%), Positives = 123/154 (79%), Gaps = 2/154 (1%)
 Frame = -3

Query: 458 YVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKML 279
           ++TV NA+IDMY+R GC++++QLLFN M ++N VTWNT+L G VK+G S +A+++FR+M 
Sbjct: 478 HLTVGNAIIDMYMRFGCVKSSQLLFNEMSLKNVVTWNTMLFGYVKIGDSAMAMRVFRQMQ 537

Query: 278 LEDQHKPDQVTMISIAQSSA--FSVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSI 105
            E+Q+KPD VTMIS  Q+SA   +    E+ HGF+ K+GLDS+TLV NSLID+YAK G I
Sbjct: 538 SENQYKPDSVTMISSIQASAAILTSCGAEIAHGFIAKLGLDSETLVMNSLIDAYAKTGFI 597

Query: 104 NNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
             A SLF QMG+ RDQ+SWN+MIAGCG+NGQG+E
Sbjct: 598 EKARSLFMQMGNLRDQSSWNIMIAGCGMNGQGRE 631



 Score = 83.2 bits (204), Expect = 6e-14
 Identities = 47/156 (30%), Positives = 85/156 (54%), Gaps = 2/156 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           D  V+++N++I MYI+ G I++ + +F  M  R+ V+WN+++    + G    A  LF  
Sbjct: 168 DRNVSILNSLISMYIKIGKIDSGRRVFCDMPKRDIVSWNSLITAYARNGNWAEAFNLFLS 227

Query: 284 MLLEDQHKPDQVTMISI--AQSSAFSVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNG 111
           M   +   P+++T + +  A     ++  G+ IHG ++  GL SD  +  ++++ YAK  
Sbjct: 228 MKSAEDLFPNRITFLGLLLACGQIGNLDLGKSIHGHLICTGLISDLRLGTAMVNMYAKCD 287

Query: 110 SINNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
            +  A ++FE+    R   SWN +IAG   NG  Q+
Sbjct: 288 RVECAQTIFEEELFDRSLVSWNSLIAGYSHNGYDQK 323



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
 Frame = -3

Query: 440 AMIDMYIRCGCIENAQLLFNSMIM-RNTVTWNTILCGSVKMGLSVIALKLFRKMLLEDQH 264
           AM++MY +C  +E AQ +F   +  R+ V+WN+++ G    G    A  L+ +M+ E   
Sbjct: 278 AMVNMYAKCDRVECAQTIFEEELFDRSLVSWNSLIAGYSHNGYDQKATLLYERMISESNL 337

Query: 263 KPDQVTMISI--AQSSAFSVAHGEMIHGFVLKIGL--DSDTLVTNSLIDSYAKNGSINNA 96
           KPD VT  ++  A +S   +     IH F++K GL  D D ++  +++D+Y K   I  A
Sbjct: 338 KPDAVTFANVVPAYASLADIRRIRSIHTFIVKKGLDMDGDVVLGTAMVDAYGKCLDIKAA 397

Query: 95  WSLFEQMGHSRDQTSWNVMIAGCGIN 18
            SLF  +      T WN MIAG  +N
Sbjct: 398 KSLFSGIKKPNTAT-WNAMIAGNNLN 422



 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 46/147 (31%), Positives = 79/147 (53%), Gaps = 2/147 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           D  V +  AM+D Y +C  I+ A+ LF+ +   NT TWN ++ G+     +  ++ LF +
Sbjct: 375 DGDVVLGTAMVDAYGKCLDIKAAKSLFSGIKKPNTATWNAMIAGNNLNHHADKSMLLFLE 434

Query: 284 MLLEDQHKPDQVTMISIAQS--SAFSVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNG 111
           M L+ +  PD +TM+ + QS     S+  G M+H + L  G      V N++ID Y + G
Sbjct: 435 M-LQSKVFPDAITMVMLFQSCGEIGSLKEGTMVHCYCLSKGFSPHLTVGNAIIDMYMRFG 493

Query: 110 SINNAWSLFEQMGHSRDQTSWNVMIAG 30
            + ++  LF +M   ++  +WN M+ G
Sbjct: 494 CVKSSQLLFNEMS-LKNVVTWNTMLFG 519



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 1/154 (0%)
 Frame = -3

Query: 461 SYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKM 282
           ++V V N++I MY++ G I +A  +F  M +++   +N+++ G    G     L LF +M
Sbjct: 68  NWVGVGNSLIRMYMKFGYIWDAYGVFEEMPIKDEDLFNSLVSGFGSNGFYDEVLVLFEQM 127

Query: 281 L-LEDQHKPDQVTMISIAQSSAFSVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSI 105
           L +      D    + +A     ++  G ++H F+++ G D +  + NSLI  Y K G I
Sbjct: 128 LDVGLLPSLDSAFYVIMACGELGNLKKGTLVHEFLIENGFDRNVSILNSLISMYIKIGKI 187

Query: 104 NNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
           ++   +F  M   RD  SWN +I     NG   E
Sbjct: 188 DSGRRVFCDM-PKRDIVSWNSLITAYARNGNWAE 220


>ref|XP_010666492.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Beta vulgaris subsp. vulgaris]
           gi|870842726|gb|KMS96072.1| hypothetical protein
           BVRB_002320 [Beta vulgaris subsp. vulgaris]
          Length = 855

 Score =  160 bits (406), Expect = 2e-37
 Identities = 81/155 (52%), Positives = 112/155 (72%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 SYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKM 282
           S + V NA++DMY++C  +EN++ LF  + ++N VTWNT+L G VK+      +K+F +M
Sbjct: 532 SNLMVENALLDMYVKCKSVENSERLFALINVKNIVTWNTMLSGYVKIASYTSTMKMFSQM 591

Query: 281 LLEDQHKPDQVTMISIAQSSAF-SVAHG-EMIHGFVLKIGLDSDTLVTNSLIDSYAKNGS 108
           LLE    PD VT+IS+ Q+SA  S +HG +M H FV K+G DS+T+V NSLID+YAKNG 
Sbjct: 592 LLERGSVPDSVTIISLIQASAACSTSHGTDMAHAFVAKLGFDSETVVMNSLIDAYAKNGF 651

Query: 107 INNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
           I+ A S+F  MG  RDQ SWNVMIAGCG+NG+ ++
Sbjct: 652 IDTASSIFVHMGRIRDQWSWNVMIAGCGMNGEAEK 686



 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 2/144 (1%)
 Frame = -3

Query: 455 VTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLL 276
           V + N ++ MY++ G +E A   F++M +R+ V+WNT++ G  + G  V  L ++  M  
Sbjct: 226 VIICNLLMSMYVKMGKMELAHSTFDTMEVRDLVSWNTLITGYAQCGSWVKGLDIYLAMKE 285

Query: 275 EDQHKPDQVTMISI--AQSSAFSVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSIN 102
                 D VT++ +  A   A ++  G  +HG  ++ GL S   +  +++D YAK G+I 
Sbjct: 286 CGDDVHDNVTLLGLVFACGQARNLTQGMSVHGHCIRAGLLSGFRLGTAILDMYAKCGNIE 345

Query: 101 NAWSLFEQMGHSRDQTSWNVMIAG 30
            A  LFE+    +   SWN +I+G
Sbjct: 346 FAEMLFEEEVFEKSLVSWNALISG 369



 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 45/146 (30%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
 Frame = -3

Query: 440 AMIDMYIRCGCIENAQLLFNSMIM-RNTVTWNTILCGSVKMGLSVIALKLFRKMLLEDQH 264
           A++DMY +CG IE A++LF   +  ++ V+WN ++ G  K G    A+  F+K+ +    
Sbjct: 333 AILDMYAKCGNIEFAEMLFEEEVFEKSLVSWNALISGFSKAGFYQRAVMFFKKLFMHSNF 392

Query: 263 KPDQVTMISI--AQSSAFSVAHGEMIHGFVLKIGLDS--DTLVTNSLIDSYAKNGSINNA 96
           KPD  T+ ++  A S    +   + IH  ++K G D   D ++  +++D+Y K  ++  A
Sbjct: 393 KPDSFTLANVIPAYSCLGYIDGIKSIHALIVKKGPDMGVDVVLGTAMVDAYGKCSNLAAA 452

Query: 95  WSLFEQMGHSRDQTSWNVMIAGCGIN 18
             LF  +  + D  +WN M+AG  +N
Sbjct: 453 EGLFYSIKEA-DTPTWNSMLAGYHLN 477



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 2/144 (1%)
 Frame = -3

Query: 455 VTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLL 276
           V +  AM+D Y +C  +  A+ LF S+   +T TWN++L G      +   +  F+KML 
Sbjct: 433 VVLGTAMVDAYGKCSNLAAAEGLFYSIKEADTPTWNSMLAGYHLNDYADHGILHFQKML- 491

Query: 275 EDQHKPDQVTMISIAQSSAF--SVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSIN 102
           + Q +PD +TM  + Q      S+  G M HG VL  G  S+ +V N+L+D Y K  S+ 
Sbjct: 492 KTQIQPDTITMTLLLQVCGLLESLKLGNMAHGCVLTRGFTSNLMVENALLDMYVKCKSVE 551

Query: 101 NAWSLFEQMGHSRDQTSWNVMIAG 30
           N+  LF  + + ++  +WN M++G
Sbjct: 552 NSERLFALI-NVKNIVTWNTMLSG 574


>ref|XP_006854251.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g01580 [Amborella trichopoda]
          Length = 872

 Score =  140 bits (352), Expect = 4e-31
 Identities = 72/151 (47%), Positives = 102/151 (67%), Gaps = 2/151 (1%)
 Frame = -3

Query: 449  VVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLLED 270
            V NA++DMY++ G +E A++LFN+M  +N V++NTI+ G+ K+GL +   +LF +M  E+
Sbjct: 560  VSNALLDMYVKWGRLEIAKVLFNNMHEKNCVSYNTIIFGNAKVGLPIETFELFNEMRYEN 619

Query: 269  QHKPDQVTMISIAQSSAFS--VAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSINNA 96
            QH+   + +I + Q+ A S  +  GE IH  VLK G   D  VTNSL+D YAK GS N+A
Sbjct: 620  QHEQASIAIIGVLQACARSGDLRLGESIHTQVLKCGFQCDNFVTNSLMDMYAKCGSFNSA 679

Query: 95   WSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
              LF Q G  R+ +SWNVMIA CGI+G G+E
Sbjct: 680  HHLFNQFGPVRETSSWNVMIAACGIHGYGKE 710



 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 60/151 (39%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
 Frame = -3

Query: 449 VVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLLED 270
           V N+++ MY  CG I++A  +F+ M + ++V++N I+ G    G    AL +F +M+   
Sbjct: 151 VGNSLMAMYSNCGRIQHAVQVFDEMTVEDSVSYNVIIRGFGLNGFEEEALMVFNRMVGLG 210

Query: 269 QHKPDQVTMISIAQSSAFS--VAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSINNA 96
              P    + S  QSSA       G  IHG+VL+ GL  +T V NSLI  YAK G I+ A
Sbjct: 211 -FSPCSFAVKSALQSSAELRYFREGMSIHGYVLRNGLVPETSVCNSLISMYAKWGRIDIA 269

Query: 95  WSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
             +F+ MG  RD  SWN MI+G   NG G E
Sbjct: 270 EKVFDNMG-ERDLVSWNAMISGFCQNGFGTE 299



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 50/157 (31%), Positives = 86/157 (54%), Gaps = 4/157 (2%)
 Frame = -3

Query: 461 SYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKM 282
           S V +  +++DMY +C  ++ A  +F  +  ++ V+WN+++ G  + G  + AL+LF  M
Sbjct: 350 SNVWIKTSIMDMYAKCSRVDYATKVFEELHDKSLVSWNSLIAGYCQNGYEIEALELFHLM 409

Query: 281 LLEDQHKPDQVTMISI--AQSSAFSVAHGEMIHGFVLKIGLD--SDTLVTNSLIDSYAKN 114
           L +   +PD +TM ++  A      +  G+ IHGF++K G D  SD ++   +ID YAK 
Sbjct: 410 LQDTYLRPDCITMANVLPAYIGLGDLQLGQCIHGFIIKQGFDLNSDFVLATVIIDMYAKC 469

Query: 113 GSINNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
             I + + LF  + +     SWN MI G  +N Q  +
Sbjct: 470 LDIESGFELFMILDNP-TLASWNAMIFGFVLNCQASD 505



 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
 Frame = -3

Query: 440 AMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLLEDQHK 261
           A+I  Y     IE AQ LF ++  +   +WN+++ G  + G    AL LFR +L     +
Sbjct: 53  ALISSYSSHNSIETAQFLFKTLYQKTIFSWNSLIRGFTRNGFYWEALSLFRNLLFTPT-R 111

Query: 260 PDQVT--MISIAQSSAFSVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSINNAWSL 87
           PD  T  ++  A S      HG  IHG V+K+G    T V NSL+  Y+  G I +A  +
Sbjct: 112 PDIFTFPLVLKASSGLLCSYHGSGIHGLVIKLGFCGLTNVGNSLMAMYSNCGRIQHAVQV 171

Query: 86  FEQMGHSRDQTSWNVMIAGCGINGQGQE 3
           F++M    D  S+NV+I G G+NG  +E
Sbjct: 172 FDEM-TVEDSVSYNVIIRGFGLNGFEEE 198



 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 46/148 (31%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
 Frame = -3

Query: 452 TVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLLE 273
           +V N++I MY + G I+ A+ +F++M  R+ V+WN ++ G  + G    AL +F  M  E
Sbjct: 251 SVCNSLISMYAKWGRIDIAEKVFDNMGERDLVSWNAMISGFCQNGFGTEALGVFVSMKRE 310

Query: 272 DQHKPDQVTMISIAQSSAFS--VAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSINN 99
                ++VT++ + Q+   S  +  G  +H  +  +G  S+  +  S++D YAK   ++ 
Sbjct: 311 KTWVFNEVTLLGLVQACGLSRNLDSGASLHAHLTGLGFLSNVWIKTSIMDMYAKCSRVDY 370

Query: 98  AWSLFEQMGHSRDQTSWNVMIAGCGING 15
           A  +FE++ H +   SWN +IAG   NG
Sbjct: 371 ATKVFEEL-HDKSLVSWNSLIAGYCQNG 397



 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 3/148 (2%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           +S   +   +IDMY +C  IE+   LF  +      +WN ++ G V    +   L+LF +
Sbjct: 453 NSDFVLATVIIDMYAKCLDIESGFELFMILDNPTLASWNAMIFGFVLNCQASDGLRLFNQ 512

Query: 284 MLLEDQHKPDQVTMISIAQSSAF--SVAHGEMIHGFVLKIGLDSDTL-VTNSLIDSYAKN 114
           M L+  H PD VT+ +I Q+ +   S   G  IH F+L+    + +L V+N+L+D Y K 
Sbjct: 513 M-LQSGHMPDSVTVTAILQACSVLGSSRLGLSIHSFILRRNSMALSLCVSNALLDMYVKW 571

Query: 113 GSINNAWSLFEQMGHSRDQTSWNVMIAG 30
           G +  A  LF  M H ++  S+N +I G
Sbjct: 572 GRLEIAKVLFNNM-HEKNCVSYNTIIFG 598



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 38/156 (24%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
 Frame = -3

Query: 464  DSYVTVVNAMIDMYIRCGCIENAQLLFNSM-IMRNTVTWNTILCGSVKMGLSVIALKLFR 288
            D++VT  N+++DMY +CG   +A  LFN    +R T +WN ++      G    A  L  
Sbjct: 659  DNFVT--NSLMDMYAKCGSFNSAHHLFNQFGPVRETSSWNVMIAACGIHGYGKEACHLME 716

Query: 287  KMLLEDQHKPDQVTMISIAQSSAFSVAHGEMIHGF---VLKIGLDSDTLVTNSLIDSYAK 117
                 D + PD +T +++  + + S    E    F   + K G+   +     ++D +++
Sbjct: 717  NAE-NDGYVPDSITFVNLLSACSHSGLIKEGCKYFRIMIEKYGIHPSSEHLGCMVDMFSR 775

Query: 116  NGSINNAWSLFEQMGHS-RDQTSWNVMIAGCGINGQ 12
             G +  A+ +  ++G   + +++W  ++ GC +NG+
Sbjct: 776  AGKVEEAYEMMMEIGERLKLESAWGALLGGCRMNGK 811


>gb|ERN15718.1| hypothetical protein AMTR_s00039p00023570 [Amborella trichopoda]
          Length = 698

 Score =  140 bits (352), Expect = 4e-31
 Identities = 72/151 (47%), Positives = 102/151 (67%), Gaps = 2/151 (1%)
 Frame = -3

Query: 449 VVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLLED 270
           V NA++DMY++ G +E A++LFN+M  +N V++NTI+ G+ K+GL +   +LF +M  E+
Sbjct: 386 VSNALLDMYVKWGRLEIAKVLFNNMHEKNCVSYNTIIFGNAKVGLPIETFELFNEMRYEN 445

Query: 269 QHKPDQVTMISIAQSSAFS--VAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSINNA 96
           QH+   + +I + Q+ A S  +  GE IH  VLK G   D  VTNSL+D YAK GS N+A
Sbjct: 446 QHEQASIAIIGVLQACARSGDLRLGESIHTQVLKCGFQCDNFVTNSLMDMYAKCGSFNSA 505

Query: 95  WSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
             LF Q G  R+ +SWNVMIA CGI+G G+E
Sbjct: 506 HHLFNQFGPVRETSSWNVMIAACGIHGYGKE 536



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 50/157 (31%), Positives = 86/157 (54%), Gaps = 4/157 (2%)
 Frame = -3

Query: 461 SYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKM 282
           S V +  +++DMY +C  ++ A  +F  +  ++ V+WN+++ G  + G  + AL+LF  M
Sbjct: 176 SNVWIKTSIMDMYAKCSRVDYATKVFEELHDKSLVSWNSLIAGYCQNGYEIEALELFHLM 235

Query: 281 LLEDQHKPDQVTMISI--AQSSAFSVAHGEMIHGFVLKIGLD--SDTLVTNSLIDSYAKN 114
           L +   +PD +TM ++  A      +  G+ IHGF++K G D  SD ++   +ID YAK 
Sbjct: 236 LQDTYLRPDCITMANVLPAYIGLGDLQLGQCIHGFIIKQGFDLNSDFVLATVIIDMYAKC 295

Query: 113 GSINNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
             I + + LF  + +     SWN MI G  +N Q  +
Sbjct: 296 LDIESGFELFMILDNP-TLASWNAMIFGFVLNCQASD 331



 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 46/148 (31%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
 Frame = -3

Query: 452 TVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLLE 273
           +V N++I MY + G I+ A+ +F++M  R+ V+WN ++ G  + G    AL +F  M  E
Sbjct: 77  SVCNSLISMYAKWGRIDIAEKVFDNMGERDLVSWNAMISGFCQNGFGTEALGVFVSMKRE 136

Query: 272 DQHKPDQVTMISIAQSSAFS--VAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSINN 99
                ++VT++ + Q+   S  +  G  +H  +  +G  S+  +  S++D YAK   ++ 
Sbjct: 137 KTWVFNEVTLLGLVQACGLSRNLDSGASLHAHLTGLGFLSNVWIKTSIMDMYAKCSRVDY 196

Query: 98  AWSLFEQMGHSRDQTSWNVMIAGCGING 15
           A  +FE++ H +   SWN +IAG   NG
Sbjct: 197 ATKVFEEL-HDKSLVSWNSLIAGYCQNG 223



 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 51/127 (40%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
 Frame = -3

Query: 377 MIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLLEDQHKPDQVTMISIAQSSAFS--VAH 204
           M + ++V++N I+ G    G    AL +F +M+      P    + S  QSSA       
Sbjct: 1   MTVEDSVSYNVIIRGFGLNGFEEEALMVFNRMVGLG-FSPCSFAVKSALQSSAELRYFRE 59

Query: 203 GEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSINNAWSLFEQMGHSRDQTSWNVMIAGCG 24
           G  IHG+VL+ GL  +T V NSLI  YAK G I+ A  +F+ MG  RD  SWN MI+G  
Sbjct: 60  GMSIHGYVLRNGLVPETSVCNSLISMYAKWGRIDIAEKVFDNMG-ERDLVSWNAMISGFC 118

Query: 23  INGQGQE 3
            NG G E
Sbjct: 119 QNGFGTE 125



 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 3/148 (2%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           +S   +   +IDMY +C  IE+   LF  +      +WN ++ G V    +   L+LF +
Sbjct: 279 NSDFVLATVIIDMYAKCLDIESGFELFMILDNPTLASWNAMIFGFVLNCQASDGLRLFNQ 338

Query: 284 MLLEDQHKPDQVTMISIAQSSAF--SVAHGEMIHGFVLKIGLDSDTL-VTNSLIDSYAKN 114
           M L+  H PD VT+ +I Q+ +   S   G  IH F+L+    + +L V+N+L+D Y K 
Sbjct: 339 M-LQSGHMPDSVTVTAILQACSVLGSSRLGLSIHSFILRRNSMALSLCVSNALLDMYVKW 397

Query: 113 GSINNAWSLFEQMGHSRDQTSWNVMIAG 30
           G +  A  LF  M H ++  S+N +I G
Sbjct: 398 GRLEIAKVLFNNM-HEKNCVSYNTIIFG 424



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 38/156 (24%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSM-IMRNTVTWNTILCGSVKMGLSVIALKLFR 288
           D++VT  N+++DMY +CG   +A  LFN    +R T +WN ++      G    A  L  
Sbjct: 485 DNFVT--NSLMDMYAKCGSFNSAHHLFNQFGPVRETSSWNVMIAACGIHGYGKEACHLME 542

Query: 287 KMLLEDQHKPDQVTMISIAQSSAFSVAHGEMIHGF---VLKIGLDSDTLVTNSLIDSYAK 117
                D + PD +T +++  + + S    E    F   + K G+   +     ++D +++
Sbjct: 543 NAE-NDGYVPDSITFVNLLSACSHSGLIKEGCKYFRIMIEKYGIHPSSEHLGCMVDMFSR 601

Query: 116 NGSINNAWSLFEQMGHS-RDQTSWNVMIAGCGINGQ 12
            G +  A+ +  ++G   + +++W  ++ GC +NG+
Sbjct: 602 AGKVEEAYEMMMEIGERLKLESAWGALLGGCRMNGK 637


>ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519143|gb|AET00767.1| pentatricopeptide (PPR)
           repeat protein [Medicago truncatula]
          Length = 811

 Score =  118 bits (296), Expect = 1e-24
 Identities = 69/156 (44%), Positives = 95/156 (60%), Gaps = 2/156 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           +S V V NA++D+Y +CG IEN+  LF  +  RN VTWNTI+ G V++G    A+ LF  
Sbjct: 370 NSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTH 429

Query: 284 MLLEDQHKPDQVTMISIAQSSAFSVA--HGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNG 111
           ML  D  +P +VT  S+ ++SA   A   G  IH   +K   + DT+V NSLID YAK G
Sbjct: 430 MLEHDM-QPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCG 488

Query: 110 SINNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
            IN+A   F++M + RD+ SWN MI G  ++G   E
Sbjct: 489 RINDARLTFDKM-NKRDEVSWNAMICGYSMHGMSME 523



 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
 Frame = -3

Query: 440 AMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLLEDQHK 261
           A++++Y + G I +AQ LF  M   + + W+ ++    +   S  AL LF +M  +    
Sbjct: 277 ALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMR-QTSVV 335

Query: 260 PDQVTMISIAQSSAFSVAH--GEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSINNAWSL 87
           P+  T  S+ Q+ A SV+   G+ IH  VLK GL+S+  V+N+++D YAK G I N+  L
Sbjct: 336 PNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKL 395

Query: 86  FEQMGHSRDQTSWNVMIAGCGINGQGQ 6
           FE++   R+  +WN +I G    G G+
Sbjct: 396 FEEL-PDRNDVTWNTIIVGYVQLGDGE 421



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
 Frame = -3

Query: 449 VVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLLED 270
           V N++IDMY +CG I +A+L F+ M  R+ V+WN ++CG    G+S+ AL LF  M+   
Sbjct: 476 VANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLF-DMMQHT 534

Query: 269 QHKPDQVTMISI--AQSSAFSVAHGE-----MIHGFVLKIGLDSDTLVTNSLIDSYAKNG 111
             KP+++T + +  A S+A  +  G+     M   + +K  ++  T +   L     + G
Sbjct: 535 DCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLL----GRLG 590

Query: 110 SINNAWSLFEQMGHSRDQTSWNVMIAGCGIN 18
             + A  L  ++ +      W  ++  C I+
Sbjct: 591 RFDEAMKLIGEIAYQPSVMVWRALLGACVIH 621



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 45/143 (31%), Positives = 78/143 (54%), Gaps = 4/143 (2%)
 Frame = -3

Query: 449 VVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLLED 270
           V  A+ID Y   G ++ A+ +F+ +  ++ V+W  ++    +      +L+LF +M +  
Sbjct: 173 VGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMG 232

Query: 269 QHKPDQVTMISIAQS----SAFSVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSIN 102
            +KP+  T+    +S     AF+V  G+ +HG  LK   D D  V  +L++ YAK+G I 
Sbjct: 233 -YKPNNFTISGALKSCLGLEAFNV--GKSVHGCALKGCYDHDLFVGIALLELYAKSGEII 289

Query: 101 NAWSLFEQMGHSRDQTSWNVMIA 33
           +A  LFE+M  + D   W++MIA
Sbjct: 290 DAQRLFEEMPKT-DLIPWSLMIA 311


>ref|XP_011032227.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Populus euphratica]
          Length = 647

 Score =  118 bits (295), Expect = 2e-24
 Identities = 60/157 (38%), Positives = 99/157 (63%), Gaps = 3/157 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           D YV ++  ++DMY + GC+ NA  +FN M ++N V+W+ ++    K G +  AL+LFR+
Sbjct: 204 DGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRE 263

Query: 284 MLLEDQHK-PDQVTMISIAQSSAFSVA--HGEMIHGFVLKIGLDSDTLVTNSLIDSYAKN 114
           ++LE Q   P+ VTM+S+ Q+ A   A   G +IHG++L+ GLDS   V ++L+  YA+ 
Sbjct: 264 LMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARC 323

Query: 113 GSINNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
           G +     +F+QM   RD  SWN +I+  G++G G++
Sbjct: 324 GKLELGQRVFDQM-DKRDVVSWNSLISSYGVHGFGKK 359



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
 Frame = -3

Query: 437 MIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKM----LLED 270
           +I+MY     I+NA+ +F+    R    +N +       G     L ++R+M    +  D
Sbjct: 108 LINMYSFFDSIDNARKVFDKTQTRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSD 167

Query: 269 QHKPDQVTMISIAQSSAFSVAH-GEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSINNAW 93
           +     V    +A     S+ + G+ IH  +L+ G D    +  +L+D YAK G ++NA 
Sbjct: 168 RFTYTYVLKACVASECLVSLLNKGKEIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNAS 227

Query: 92  SLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
            +F QM   ++  SW+ MIA    NG+  E
Sbjct: 228 CVFNQM-PVKNVVSWSAMIACYAKNGKAFE 256


>ref|XP_002313416.2| chlororespiratory reduction 2 family protein [Populus trichocarpa]
           gi|550331005|gb|EEE87371.2| chlororespiratory reduction
           2 family protein [Populus trichocarpa]
          Length = 650

 Score =  118 bits (295), Expect = 2e-24
 Identities = 60/157 (38%), Positives = 99/157 (63%), Gaps = 3/157 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           D YV ++  ++DMY + GC+ NA  +FN M ++N V+W+ ++    K G +  AL+LFR+
Sbjct: 207 DGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRE 266

Query: 284 MLLEDQHK-PDQVTMISIAQSSAFSVA--HGEMIHGFVLKIGLDSDTLVTNSLIDSYAKN 114
           ++LE Q   P+ VTM+S+ Q+ A   A   G +IHG++L+ GLDS   V ++L+  YA+ 
Sbjct: 267 LMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARC 326

Query: 113 GSINNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
           G +     +F+QM   RD  SWN +I+  G++G G++
Sbjct: 327 GKLELGQRVFDQM-DKRDVVSWNSLISSYGVHGFGKK 362



 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
 Frame = -3

Query: 437 MIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKM----LLED 270
           +I+MY     I+NA+ +F+    R    +N +       G     L ++R+M    +  D
Sbjct: 111 LINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSD 170

Query: 269 QHKPDQVTMISIAQSSAFSVAH-GEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSINNAW 93
           +     V    +A     S+ + G  IH  +L+ G D    +  +L+D YAK G ++NA 
Sbjct: 171 RFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNAS 230

Query: 92  SLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
            +F QM   ++  SW+ MIA    NG+  E
Sbjct: 231 CVFNQM-PVKNVVSWSAMIACYAKNGKAFE 259


>ref|XP_010937492.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial [Elaeis guineensis]
          Length = 791

 Score =  116 bits (291), Expect = 5e-24
 Identities = 63/156 (40%), Positives = 96/156 (61%), Gaps = 2/156 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           D  V+V NA+I MY RCG ++ A+ +F+    R+ VTWN ++    ++G S  AL LF +
Sbjct: 478 DEDVSVANALIGMYARCGKLDLARTIFDHTT-RDVVTWNALIAAYAQLGHSSDALSLFDR 536

Query: 284 MLLEDQHKPDQVTMISIAQSSAFSVA--HGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNG 111
           ML ED  KP+  T++SI  + +      HG  IH ++ K+GL+SD  +  +L+D YAK G
Sbjct: 537 MLFEDV-KPNSATLVSILSACSHMAVLHHGRWIHNYIKKMGLESDVSICTALVDMYAKCG 595

Query: 110 SINNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
            +  + ++F+ M   RD  SWNVMI+G GI+G  +E
Sbjct: 596 QLEISRAIFDSM-PERDVVSWNVMISGYGIHGYAKE 630



 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 3/142 (2%)
 Frame = -3

Query: 449 VVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKM-LLE 273
           V NA+  MY +   +E A+  F+ +  R+T +WN ++ G  KMGL V  L L+R++  L 
Sbjct: 380 VGNALQSMYCKFELLEYARKAFDVVGERDTESWNLMVFGYGKMGLDVKCLDLYRELQFLR 439

Query: 272 DQHKPDQVTMISIAQS-SAFSVAH-GEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSINN 99
             +  D   ++S+  S S     H G+ +H +++K  +D D  V N+LI  YA+ G ++ 
Sbjct: 440 LGYSSDLNCLVSVIYSCSQLGALHLGQSMHCYMIKYAVDEDVSVANALIGMYARCGKLDL 499

Query: 98  AWSLFEQMGHSRDQTSWNVMIA 33
           A ++F+    +RD  +WN +IA
Sbjct: 500 ARTIFDHT--TRDVVTWNALIA 519



 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
 Frame = -3

Query: 458 YVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKML 279
           Y +V ++++ MY +C  +E A ++F  +  R+ V+W  I+    + G     L+LF +ML
Sbjct: 276 YPSVNSSLLSMYSKCESLEEATIVFQELSERDVVSWTAIVGVYARKGFIFECLELF-QML 334

Query: 278 LEDQHKPDQVTMISIAQSSAFS--VAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSI 105
                +PD V +  +    A S  V+ G+  HG +L+     +TLV N+L   Y K   +
Sbjct: 335 QNSGVEPDGVFISCMLTGFANSGNVSGGKAFHGVMLRRNFVLNTLVGNALQSMYCKFELL 394

Query: 104 NNAWSLFEQMGHSRDQTSWNVMIAGCGING 15
             A   F+ +G  RD  SWN+M+ G G  G
Sbjct: 395 EYARKAFDVVG-ERDTESWNLMVFGYGKMG 423



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 40/143 (27%), Positives = 77/143 (53%), Gaps = 5/143 (3%)
 Frame = -3

Query: 449 VVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMG---LSVIALKLFRKML 279
           V ++++ MY +CG I +A  +F+ M  R+ V W  ++ G V+ G     ++ LK   ++ 
Sbjct: 174 VGSSLVYMYSKCGVIGDAYRMFDEMPARDVVAWTAVIIGCVRNGEFEEGLVCLKKMHRVG 233

Query: 278 LEDQHKPDQVTMISIAQS--SAFSVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSI 105
            +   +P+  TM    Q+  +  ++  G+ +HGF+LK G+     V +SL+  Y+K  S+
Sbjct: 234 GDGGGRPNSRTMEGGLQACGNLGALPEGKCLHGFLLKAGMGCYPSVNSSLLSMYSKCESL 293

Query: 104 NNAWSLFEQMGHSRDQTSWNVMI 36
             A  +F+++   RD  SW  ++
Sbjct: 294 EEATIVFQELS-ERDVVSWTAIV 315



 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
 Frame = -3

Query: 410 CIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLLEDQHKPDQVTMISIA 231
           C+ +A +  NS    +T  WN+I+          +AL+ + +ML      P++ T+  +A
Sbjct: 87  CVFSAAIPSNS---GDTFLWNSIIQAHFSNVDFPLALRFYSQMLSSGA-SPNEFTIPMVA 142

Query: 230 QSSA--FSVAHGEMIHGFVLKIGL--DSDTLVTNSLIDSYAKNGSINNAWSLFEQMGHSR 63
            +SA    +  G  IHG  +K GL     T V +SL+  Y+K G I +A+ +F++M  +R
Sbjct: 143 SASAELLDLGLGSSIHGNAMKFGLFNGKSTAVGSSLVYMYSKCGVIGDAYRMFDEMP-AR 201

Query: 62  DQTSWNVMIAGCGINGQGQE 3
           D  +W  +I GC  NG+ +E
Sbjct: 202 DVVAWTAVIIGCVRNGEFEE 221



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 38/148 (25%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
 Frame = -3

Query: 464  DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
            +S V++  A++DMY +CG +E ++ +F+SM  R+ V+WN ++ G    G +  AL++FR+
Sbjct: 578  ESDVSICTALVDMYAKCGQLEISRAIFDSMPERDVVSWNVMISGYGIHGYAKEALEVFRE 637

Query: 284  MLLEDQHKPDQVTMISIAQ--SSAFSVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNG 111
            M  +   +P+ VT +++    S A  V  G+ +   + K  +         ++D   ++G
Sbjct: 638  M-EKTSLRPNGVTFLAVLSTCSHAGLVKEGKELFCGMGKYSVTPTLKHYACIVDLLGRSG 696

Query: 110  SINNAWSLFEQMGHSRDQTSWNVMIAGC 27
            ++  A ++   M    D   W  ++  C
Sbjct: 697  NLCEAEAMVLNMPMEPDSGIWGALLGAC 724


>gb|KHN41661.1| Pentatricopeptide repeat-containing protein [Glycine soja]
          Length = 514

 Score =  116 bits (291), Expect = 5e-24
 Identities = 63/152 (41%), Positives = 94/152 (61%), Gaps = 2/152 (1%)
 Frame = -3

Query: 461 SYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKM 282
           S+V  +NAM DMY +CG I+ A  LF+ MI +N V+WN ++ G VKMG     + LF +M
Sbjct: 74  SHVNALNAMTDMYAKCGDIDRAWFLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEM 133

Query: 281 LLEDQHKPDQVTMISIAQSSA--FSVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGS 108
            L +  KPD  T+ S+  S A   S+ HG+++HG V+ +G+D+  LV+++L+D Y K G 
Sbjct: 134 QLSEMLKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGV 193

Query: 107 INNAWSLFEQMGHSRDQTSWNVMIAGCGINGQ 12
             +A  +FE M   R+  +WN +I G   NGQ
Sbjct: 194 TLDARVIFETM-PIRNVITWNALILGYAQNGQ 224



 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 38/148 (25%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           D+ + V +A++DMY +CG   +A+++F +M +RN +TWN ++ G  + G  + AL L+ +
Sbjct: 175 DNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNALILGYAQNGQVLEALTLYER 234

Query: 284 MLLEDQHKPDQVTMISIAQS--SAFSVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNG 111
           M  +   KPD +T + +  +  +A  V   +     + + G          +I    ++G
Sbjct: 235 M-QQQNFKPDNITFVGVLSACINADMVKEVQKYFDSISEQGSAPTLDHYACMITLLGRSG 293

Query: 110 SINNAWSLFEQMGHSRDQTSWNVMIAGC 27
           S++ A  L + M H  +   W+ +++ C
Sbjct: 294 SVDKAVDLIQGMPHEPNYRIWSTLLSVC 321


>ref|XP_011020921.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Populus euphratica]
          Length = 666

 Score =  115 bits (289), Expect = 9e-24
 Identities = 62/155 (40%), Positives = 101/155 (65%), Gaps = 2/155 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           +S + V N+++ M++ C  +E+A+  FN M  ++ ++W  I+CG VK G    ALKLFRK
Sbjct: 227 ESDILVSNSILKMHVDCERMEDARGFFNQMTTKDVISWTEIICGYVKKGEFNEALKLFRK 286

Query: 284 MLLEDQHKPDQVTMISIAQSSAFSVAH--GEMIHGFVLKIGLDSDTLVTNSLIDSYAKNG 111
           M + D  KPD +++ S+  + A +VAH  G+ IHG+ L+ G D++ +V N+ +D YAK+G
Sbjct: 287 MNM-DGIKPDSLSVSSVLPACARTVAHKNGKEIHGYSLRNGTDNNLIVQNATMDMYAKSG 345

Query: 110 SINNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQ 6
            ++ A  +FE+M   RD  SW VMI G  ++G+G+
Sbjct: 346 FVDYALKVFERM-KKRDVISWTVMILGLSLHGKGE 379



 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 2/151 (1%)
 Frame = -3

Query: 449 VVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLLED 270
           V+ A+I++Y R   IE  + LF+    RN+V W  IL   +      +A+ +F +M+ E 
Sbjct: 131 VITALIEIYGRLDGIEAGKWLFDKSPRRNSVAWTMILKLYLMENKPDLAINVFYQMV-EL 189

Query: 269 QHKPDQVTMISIAQSSAF--SVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSINNA 96
             + D V +I+ A +     SV HG  +H    K GL+SD LV+NS++  +     + +A
Sbjct: 190 NARIDSVALITAAGACGLLKSVEHGRRVHDVARKFGLESDILVSNSILKMHVDCERMEDA 249

Query: 95  WSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
              F QM  ++D  SW  +I G    G+  E
Sbjct: 250 RGFFNQM-TTKDVISWTEIICGYVKKGEFNE 279


>ref|XP_010266357.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Nelumbo nucifera]
          Length = 646

 Score =  115 bits (289), Expect = 9e-24
 Identities = 63/157 (40%), Positives = 96/157 (61%), Gaps = 3/157 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           +S+V V   ++D Y + GC+  A  +F+ M  RN V+W+ ++    K G S  AL LF +
Sbjct: 203 ESHVHVATTLVDAYAKFGCVSYACRVFDEMPERNVVSWSAMIACYAKNGRSFEALDLFHE 262

Query: 284 MLLEDQHK-PDQVTMISIAQSSAF--SVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKN 114
           M+       P+ VTM+S+ Q+ A   S+  G+++HG+VL+ GLDS   V N+L+  YAK 
Sbjct: 263 MMTRTHDAIPNSVTMVSVLQACASIASLGQGKLMHGYVLRRGLDSILTVINALVSMYAKC 322

Query: 113 GSINNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
           GS+     +F++MG  RD  SWN MI+G GI+G G+E
Sbjct: 323 GSLKIGRHIFDRMG-KRDVVSWNSMISGYGIHGYGEE 358



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
 Frame = -3

Query: 437 MIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKM----LLED 270
           +I+MY     IENA+ +F+    +    WN I+      G    AL L+  M    +  D
Sbjct: 107 LINMYSDLDSIENARYVFDKTHNKTIFVWNAIIRALALAGQGDEALSLYYWMNQIGVPSD 166

Query: 269 QHKPDQVTMISIAQSSAFSVAHG-EMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSINNAW 93
           +     V    +  S   S+    + IH  +++ GL+S   V  +L+D+YAK G ++ A 
Sbjct: 167 RFTYPYVLKACVTSSLPVSLLRRVQEIHAHIVRHGLESHVHVATTLVDAYAKFGCVSYAC 226

Query: 92  SLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
            +F++M   R+  SW+ MIA    NG+  E
Sbjct: 227 RVFDEM-PERNVVSWSAMIACYAKNGRSFE 255



 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 37/152 (24%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           DS +TV+NA++ MY +CG ++  + +F+ M  R+ V+WN+++ G    G    A+++F +
Sbjct: 306 DSILTVINALVSMYAKCGSLKIGRHIFDRMGKRDVVSWNSMISGYGIHGYGEEAIQVFNQ 365

Query: 284 MLLEDQHKPDQVTMISI--AQSSAFSVAHGE-MIHGFVLKIGLDSDTLVTNSLIDSYAKN 114
           M+      P+ +T +S+  A S    V  G+ +    + +  +         ++D   + 
Sbjct: 366 MITTG-ISPNSITFVSVLGACSHVGLVNEGKRLFQSMIQEYRIFPSAEHYACMVDILGRA 424

Query: 113 GSINNAWSLFEQMGHSRDQTSWNVMIAGCGIN 18
           G ++ A  + E M      T W  ++  C I+
Sbjct: 425 GHLDEAAKVVEDMRIEPGPTVWGSLLGACRIH 456


>ref|XP_002303738.2| hypothetical protein POPTR_0003s15840g, partial [Populus
           trichocarpa] gi|550343274|gb|EEE78717.2| hypothetical
           protein POPTR_0003s15840g, partial [Populus trichocarpa]
          Length = 566

 Score =  115 bits (288), Expect = 1e-23
 Identities = 63/155 (40%), Positives = 100/155 (64%), Gaps = 2/155 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           +S + V N+++ M I C  +E+A+  FN M  ++ ++W  I+CG VK G    ALKLFRK
Sbjct: 202 ESDILVSNSLLKMQIDCQRMEDARGFFNQMTTKDVISWTEIICGYVKKGEFNEALKLFRK 261

Query: 284 MLLEDQHKPDQVTMISIAQSSAFSVAH--GEMIHGFVLKIGLDSDTLVTNSLIDSYAKNG 111
           M + D  KPD +++ S+  + A +VAH  G+ IHG+ L+ G+D++ +V N+  D YAK+G
Sbjct: 262 MNM-DGIKPDSLSVSSVLPACARTVAHKNGKEIHGYSLRNGMDNNLIVQNATTDMYAKSG 320

Query: 110 SINNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQ 6
            ++ A  +FE+M   RD  SW VMI G  ++G+G+
Sbjct: 321 LVDYALKVFERM-KKRDVISWTVMILGFSLHGKGE 354



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
 Frame = -3

Query: 449 VVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLLED 270
           V+ A+I++Y R   IE  + LF+    RN+V W  IL   +      +A+ +F +M+ E 
Sbjct: 106 VITALIEIYGRLDGIEAGKWLFDKSPRRNSVAWTMILKLYLMENKPDLAINVFYQMV-EL 164

Query: 269 QHKPDQVTMISIAQSSAF--SVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSINNA 96
             + D V +I+ A +     SV HG  +H    K  L+SD LV+NSL+        + +A
Sbjct: 165 NARIDSVVLITAAGACGLLKSVEHGRRVHDVARKFRLESDILVSNSLLKMQIDCQRMEDA 224

Query: 95  WSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
              F QM  ++D  SW  +I G    G+  E
Sbjct: 225 RGFFNQM-TTKDVISWTEIICGYVKKGEFNE 254


>gb|AKH05211.1| chlororespiratory reduction 2 [Hypseocharis bilobata]
          Length = 653

 Score =  114 bits (286), Expect = 2e-23
 Identities = 60/157 (38%), Positives = 96/157 (61%), Gaps = 3/157 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           ++ V ++  ++DMY R GC+  A  +F+ M +RN V+W+ ++    K G    AL+LFR+
Sbjct: 211 ETNVHIMTTLVDMYARFGCVSCASFVFDEMPVRNVVSWSAMIACYAKNGKPFEALELFRE 270

Query: 284 MLLEDQHK-PDQVTMISIAQSSAFSVA--HGEMIHGFVLKIGLDSDTLVTNSLIDSYAKN 114
           M LE     P+ VTM+S+ Q+ A   A   G+M+HG++L+ GLDS   +TN+L+  Y K 
Sbjct: 271 MELETHDSLPNSVTMVSVLQACASLAALERGKMVHGYILRRGLDSILPITNALVTMYGKC 330

Query: 113 GSINNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
           G +     +F+QM   RD  SWN +I+  GI+G G++
Sbjct: 331 GKLEQGQRVFDQM-DERDVVSWNSLISSYGIHGFGEK 366



 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 40/147 (27%), Positives = 75/147 (51%), Gaps = 5/147 (3%)
 Frame = -3

Query: 437 MIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKM----LLED 270
           +IDMY     +E+A+ +F+ +  R    WN +       G  +  L L+R+M    +  D
Sbjct: 115 LIDMYSELESVEDARKVFDKIRKRTIYVWNALFRALTLAGYGLEVLNLYRQMNQKGIASD 174

Query: 269 QHKPDQVTMISIAQSSAFSVAH-GEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSINNAW 93
           +     V    +A  ++ S+   G+ IH  +L+ G +++  +  +L+D YA+ G ++ A 
Sbjct: 175 RFTYTFVLKACVAAEASISLLKKGKEIHAHILRHGYETNVHIMTTLVDMYARFGCVSCAS 234

Query: 92  SLFEQMGHSRDQTSWNVMIAGCGINGQ 12
            +F++M   R+  SW+ MIA    NG+
Sbjct: 235 FVFDEM-PVRNVVSWSAMIACYAKNGK 260



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 37/152 (24%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           DS + + NA++ MY +CG +E  Q +F+ M  R+ V+WN+++      G    A+++F +
Sbjct: 314 DSILPITNALVTMYGKCGKLEQGQRVFDQMDERDVVSWNSLISSYGIHGFGEKAIEIFEE 373

Query: 284 MLLEDQHKPDQVTMISI--AQSSAFSVAHGEMI-HGFVLKIGLDSDTLVTNSLIDSYAKN 114
           M+      P  ++ +S+  A S A  V  G+M+    V + G+         ++D   + 
Sbjct: 374 MISHGV-SPSHISFVSVLGACSHAGLVEEGKMLFKSMVKEHGMYPTVDHYACMVDLLGRA 432

Query: 113 GSINNAWSLFEQMGHSRDQTSWNVMIAGCGIN 18
             ++ A  + E M        W  ++  C I+
Sbjct: 433 NQLDEAIKIVEDMRIEPGPQVWGSLLGSCRIH 464


>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score =  114 bits (286), Expect = 2e-23
 Identities = 60/157 (38%), Positives = 102/157 (64%), Gaps = 3/157 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           + +V ++  ++DMY R GC+ NA  +F+ M ++N V+W+ ++    K G  + AL+LFRK
Sbjct: 215 EGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRK 274

Query: 284 MLLEDQH-KPDQVTMISIAQSSAFSVA--HGEMIHGFVLKIGLDSDTLVTNSLIDSYAKN 114
           M+LE+Q   P+ VTM+S+ Q+ A   A   G+++HG++L+ GLDS   V ++L+  YA+ 
Sbjct: 275 MMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARC 334

Query: 113 GSINNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
           G++     +FE+M   RD  SWN +I+  GI+G G++
Sbjct: 335 GNLELGHRVFERM-EKRDVVSWNSLISSYGIHGFGRK 370



 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
 Frame = -3

Query: 437 MIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKM----LLED 270
           +I+MY     I+NA+ +F+    R    WN +       G     L L+R+M    +  D
Sbjct: 119 LINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSD 178

Query: 269 QHKPDQVTMISIAQSSAFSVA-HGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSINNAW 93
           +     V    +A  +  S+  +G  IHG +L+ G +    +  +L+D YA+ G + NA 
Sbjct: 179 RFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNAS 238

Query: 92  SLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
            +F+QM   ++  SW+ MIA    NG+  E
Sbjct: 239 RVFDQM-PVKNVVSWSAMIACYSKNGKPLE 267


>gb|AKH05205.1| chlororespiratory reduction 2, partial [Francoa sonchifolia]
          Length = 600

 Score =  114 bits (285), Expect = 3e-23
 Identities = 59/157 (37%), Positives = 97/157 (61%), Gaps = 3/157 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           DS+V ++  ++DMY R GC+ +A  +F+ M +RN V+W+ ++    K G    AL+LFR 
Sbjct: 157 DSHVYIMTTLVDMYARFGCVSSASYVFDQMPVRNVVSWSAMIACYAKNGRPFEALELFRL 216

Query: 284 MLLEDQH-KPDQVTMISIAQSSAFSVA--HGEMIHGFVLKIGLDSDTLVTNSLIDSYAKN 114
           M+LE     P+ VTM+S+ Q+ A   A   G ++HG++L+ GLDS   V ++L+  YA+ 
Sbjct: 217 MMLETHDLVPNSVTMVSVLQACAALAALEQGRLLHGYILRRGLDSILPVISTLVTMYARC 276

Query: 113 GSINNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
           G +     +F+QM   RD  SWN +I+  G++G G++
Sbjct: 277 GKLKLGQQIFDQM-DKRDVVSWNSLISSYGVHGYGKK 312



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           DS + V++ ++ MY RCG ++  Q +F+ M  R+ V+WN+++      G    A+++F++
Sbjct: 260 DSILPVISTLVTMYARCGKLKLGQQIFDQMDKRDVVSWNSLISSYGVHGYGKKAIEIFKE 319

Query: 284 MLLEDQHKPDQVTMISI--AQSSAFSVAHGEMIHGFVLK-IGLDSDTLVTNSLIDSYAKN 114
           M +    KP  ++ +S+  A S A  V  G  + G ++K  G+         ++D   + 
Sbjct: 320 M-ISSGVKPSHISFVSVLGACSHAGLVEEGRTLFGSIVKEHGISPTVEHYACMVDLLGRA 378

Query: 113 GSINNAWSLFEQMGHSRDQTSWNVMIAGCGIN 18
             ++ A  L E M        W  ++  C I+
Sbjct: 379 NRLDEAGKLIEDMRIEPGAKVWGSLLGSCRIH 410



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
 Frame = -3

Query: 437 MIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKM----LLED 270
           +I+MY     +++A+ +F+ +  R    WN +       G     L+L+R M    +  D
Sbjct: 61  LINMYSELNALDDARKVFDEIHDRTLYVWNALFRALTLAGHGEEVLELYRWMNQIGVASD 120

Query: 269 QHKPDQVTMISIAQSSAFSV-AHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSINNAW 93
           +     V    ++     S+  +G+ IH  +L+ G DS   +  +L+D YA+ G +++A 
Sbjct: 121 RFTYTYVLKACVSAECFVSLLGYGKEIHAHILRHGYDSHVYIMTTLVDMYARFGCVSSAS 180

Query: 92  SLFEQMGHSRDQTSWNVMIAGCGINGQ 12
            +F+QM   R+  SW+ MIA    NG+
Sbjct: 181 YVFDQM-PVRNVVSWSAMIACYAKNGR 206


>ref|XP_011080694.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Sesamum indicum]
          Length = 657

 Score =  114 bits (285), Expect = 3e-23
 Identities = 60/157 (38%), Positives = 101/157 (64%), Gaps = 3/157 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           +S V ++  ++DMY + GC+ENA L+F+SM ++N V+W+ ++    K      AL+LFR+
Sbjct: 214 ESQVHIMTTLVDMYAKFGCVENANLVFSSMPVKNLVSWSALIACFAKNDRPFEALRLFRE 273

Query: 284 MLLED-QHKPDQVTMISIAQSSA--FSVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKN 114
           M+LE     P+ VTM+S+ Q+ A   ++  G++IHG++L+ GLDS   V ++L+  YA+ 
Sbjct: 274 MMLESGDMLPNSVTMVSVLQACAAVSALDQGKLIHGYILRKGLDSILPVMSTLVTMYARC 333

Query: 113 GSINNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
           G ++   ++F QM   RD  SWN +I+  GI+G G +
Sbjct: 334 GDLDLGKNVFNQM-DKRDIVSWNSLISSYGIHGLGSK 369



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 5/140 (3%)
 Frame = -3

Query: 437 MIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKM----LLED 270
           +I +Y     IE+A+ +F+    R    WN I       GL    L L+R+M    +  D
Sbjct: 118 LITLYSELDSIEHARQVFDKTTHRTIYVWNAIFRALSLSGLGEEVLNLYRRMNRIGMRSD 177

Query: 269 QHKPDQVTMISIAQSSAFS-VAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSINNAW 93
           +     V    +   S  S +  G+ IH  VL+ G +S   +  +L+D YAK G + NA 
Sbjct: 178 RFTYTYVLKACVVSDSGLSSLWAGKEIHAHVLRHGYESQVHIMTTLVDMYAKFGCVENAN 237

Query: 92  SLFEQMGHSRDQTSWNVMIA 33
            +F  M   ++  SW+ +IA
Sbjct: 238 LVFSSM-PVKNLVSWSALIA 256


>ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata] gi|297323351|gb|EFH53772.1| hypothetical protein
           ARALYDRAFT_905886 [Arabidopsis lyrata subsp. lyrata]
          Length = 657

 Score =  114 bits (285), Expect = 3e-23
 Identities = 57/157 (36%), Positives = 99/157 (63%), Gaps = 3/157 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           +S+V ++  ++DMY R GC++ A  +FN M +RN V+W+ ++    K G +  AL+ FR+
Sbjct: 214 NSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFRE 273

Query: 284 MLLEDQ-HKPDQVTMISIAQSSAFSVA--HGEMIHGFVLKIGLDSDTLVTNSLIDSYAKN 114
           M+ E +   P+ VTM+S+ Q+ A   A   G +IHG++L+ GLDS   V ++L+  Y + 
Sbjct: 274 MMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRC 333

Query: 113 GSINNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
           G ++    +F++M H RD  SWN +I+  G++G G++
Sbjct: 334 GKLDVGQRVFDRM-HDRDVVSWNSLISSYGVHGYGRK 369


>ref|XP_011624817.1| PREDICTED: pentatricopeptide repeat-containing protein At2g39620
            [Amborella trichopoda]
          Length = 925

 Score =  114 bits (284), Expect = 3e-23
 Identities = 57/156 (36%), Positives = 99/156 (63%), Gaps = 2/156 (1%)
 Frame = -3

Query: 464  DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
            +S + V+NA IDMY +CGCI +A+ LF +  +++ ++WNT++ G  + G    A+ +F  
Sbjct: 582  ESDLHVMNATIDMYAKCGCIGHAEKLFETEFVKDEISWNTMIAGYAQNGRPKDAVSIFCW 641

Query: 284  MLLEDQHKPDQVTMISI--AQSSAFSVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNG 111
            M  +++ +P+ V++++I  A +   ++  G+ IH +++K G  S  +V NSLID Y+K G
Sbjct: 642  MREKEELQPNLVSIVNIIPAYAQLAALNEGKTIHSYIVKTGFFSSIIVINSLIDMYSKCG 701

Query: 110  SINNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
             +  A  +F+ M H RD  SWN M++G  I+G GQ+
Sbjct: 702  HLGMAREIFDLMPH-RDMVSWNAMLSGYAIHGHGQD 736



 Score =  104 bits (260), Expect = 2e-20
 Identities = 58/153 (37%), Positives = 91/153 (59%), Gaps = 2/153 (1%)
 Frame = -3

Query: 455 VTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLL 276
           V++  A++ MY++CGC  +A+L F+ M  ++ VTWN ++ G  +MG +  A++ FR M  
Sbjct: 484 VSIGTALVAMYVKCGCFSHAKLWFHEMPCKDVVTWNAMVNGYAQMGHAHKAMETFRHMQS 543

Query: 275 EDQHKPDQVTMISIAQSSAF--SVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSIN 102
               K D  T++ +  S A   ++ +G  IHG  +K+G +SD  V N+ ID YAK G I 
Sbjct: 544 VGL-KLDSSTLVGLLPSCALLKAINNGNCIHGHAIKLGFESDLHVMNATIDMYAKCGCIG 602

Query: 101 NAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
           +A  LFE     +D+ SWN MIAG   NG+ ++
Sbjct: 603 HAEKLFE-TEFVKDEISWNTMIAGYAQNGRPKD 634



 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 43/143 (30%), Positives = 86/143 (60%), Gaps = 2/143 (1%)
 Frame = -3

Query: 455 VTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLL 276
           ++V N +ID+Y +CG +E ++ +F+ ++ R+ V+W +++    + G SV AL++F  +L 
Sbjct: 280 LSVFNGLIDLYAKCGNVEASRRIFDRLLKRDDVSWGSLISAYSQNGYSVEALEIF-GVLK 338

Query: 275 EDQHKPDQVTMIS--IAQSSAFSVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSIN 102
            D+ + +QV ++   +A +    +  G+ IH ++++ G   D  V+ +LI  YAK G++N
Sbjct: 339 RDKVRLNQVQIVGALLAATDLRDIEKGKEIHDYLIQRGTSLDIEVSTTLITMYAKCGNLN 398

Query: 101 NAWSLFEQMGHSRDQTSWNVMIA 33
            A  LF  +  + D  +W+ MI+
Sbjct: 399 LAKELFNGI-ENGDLVAWSAMIS 420



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 46/151 (30%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
 Frame = -3

Query: 449 VVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLLED 270
           +   +IDMY + G  E A+ +FN M  R+ V WN ++ G  ++G    ALK+FR+M +  
Sbjct: 183 ICTGLIDMYCKFGYTEFAREVFNKMSERDVVAWNAMISGYSQVGDPKEALKVFREMQMVG 242

Query: 269 QHKPDQVTMISIAQSSAF--SVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSINNA 96
             + + V+++++  S  +  S+   + +H F +K   + +  V N LID YAK G++  +
Sbjct: 243 -IEANSVSLLNLFPSVCWLSSLVLCKCLHCFAIK--REFELSVFNGLIDLYAKCGNVEAS 299

Query: 95  WSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
             +F+++   RD  SW  +I+    NG   E
Sbjct: 300 RRIFDRL-LKRDDVSWGSLISAYSQNGYSVE 329



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
 Frame = -3

Query: 461  SYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKM 282
            S + V+N++IDMY +CG +  A+ +F+ M  R+ V+WN +L G    G    A+ LF +M
Sbjct: 685  SSIIVINSLIDMYSKCGHLGMAREIFDLMPHRDMVSWNAMLSGYAIHGHGQDAIFLFSQM 744

Query: 281  LLEDQHKPDQVTMISIAQSSAFSVAHGEMIHGFVLKIGLDSDTLVTNS------LIDSYA 120
              E+    D ++++S+  +       G +  G  +   +  +  +  +      ++D   
Sbjct: 745  -RENSVLFDDLSLLSVLSACRH---EGLVDEGLRIFESMRYENYIEPNMEHHACMVDLLG 800

Query: 119  KNGSINNAWSLFEQMGHSRDQTSWNVMIAGCGIN 18
            + G I  AW+  ++M    D   W  ++  C I+
Sbjct: 801  RAGKIEEAWAFIQRMPMKPDAGVWGALLGACRIH 834


>gb|KHN23502.1| Putative pentatricopeptide repeat-containing protein, mitochondrial
           [Glycine soja]
          Length = 717

 Score =  114 bits (284), Expect = 3e-23
 Identities = 68/156 (43%), Positives = 94/156 (60%), Gaps = 2/156 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           DS V V NA++D+Y +CG IEN+  LF     +N V WNTI+ G V++G    AL LF  
Sbjct: 276 DSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSN 335

Query: 284 MLLEDQHKPDQVTMISIAQSSAFSVA--HGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNG 111
           ML  D  +P +VT  S+ ++SA  VA   G  IH   +K   + D++V NSLID YAK G
Sbjct: 336 MLGLD-IQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCG 394

Query: 110 SINNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
            I++A   F++M   +D+ SWN +I G  I+G G E
Sbjct: 395 RIDDARLTFDKM-DKQDEVSWNALICGYSIHGLGME 429



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 2/156 (1%)
 Frame = -3

Query: 464 DSYVTVVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRK 285
           D YV +  A++++Y + G I  AQ  F  M   + + W+ ++    +   S  AL+LF +
Sbjct: 176 DLYVGI--ALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCR 233

Query: 284 MLLEDQHKPDQVTMISIAQSSAFSVAH--GEMIHGFVLKIGLDSDTLVTNSLIDSYAKNG 111
           M       P+  T  S+ Q+ A  V    G  IH  VLK+GLDS+  V+N+L+D YAK G
Sbjct: 234 MRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCG 293

Query: 110 SINNAWSLFEQMGHSRDQTSWNVMIAGCGINGQGQE 3
            I N+  LF      +++ +WN +I G    G G++
Sbjct: 294 EIENSVKLFTG-STEKNEVAWNTIIVGYVQLGDGEK 328



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 40/147 (27%), Positives = 76/147 (51%), Gaps = 3/147 (2%)
 Frame = -3

Query: 449 VVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLLED 270
           V N++IDMY +CG I++A+L F+ M  ++ V+WN ++CG    GL + AL LF  M+ + 
Sbjct: 382 VANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLF-DMMQQS 440

Query: 269 QHKPDQVTMISI--AQSSAFSVAHGEMIHGFVLK-IGLDSDTLVTNSLIDSYAKNGSINN 99
             KP+++T + +  A S+A  +  G      +L+  G++        ++    ++G  + 
Sbjct: 441 NSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDE 500

Query: 98  AWSLFEQMGHSRDQTSWNVMIAGCGIN 18
           A  L  ++        W  ++  C I+
Sbjct: 501 AVKLIGEIPFQPSVMVWRALLGACVIH 527



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
 Frame = -3

Query: 449 VVNAMIDMYIRCGCIENAQLLFNSMIMRNTVTWNTILCGSVKMGLSVIALKLFRKMLLED 270
           V  A+ID Y  CG ++ A+ +F+ +  ++ V+W  ++    +      +L LF +M +  
Sbjct: 78  VGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMG 137

Query: 269 QHKPDQVTMISIAQS----SAFSVAHGEMIHGFVLKIGLDSDTLVTNSLIDSYAKNGSIN 102
            ++P+  T+ +  +S     AF V  G+ +HG  LK+  D D  V  +L++ Y K+G I 
Sbjct: 138 -YRPNNFTISAALKSCNGLEAFKV--GKSVHGCALKVCYDRDLYVGIALLELYTKSGEIA 194

Query: 101 NAWSLFEQMGHSRDQTSWNVMIA 33
            A   FE+M    D   W++MI+
Sbjct: 195 EAQQFFEEMPKD-DLIPWSLMIS 216