BLASTX nr result

ID: Cinnamomum23_contig00028391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00028391
         (885 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]    54   7e-08
ref|XP_010496878.1| PREDICTED: uncharacterized protein LOC104773...    56   8e-07
ref|XP_012491126.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    55   6e-06

>emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
          Length = 1505

 Score = 53.5 bits (127), Expect(2) = 7e-08
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
 Frame = -1

Query: 885 VFTACYLINGLPTKVLNGLSPIQFYSKFHPI----SDILLKIFDCVCYVHNHDSTKNNFS 718
           + TA YLIN +PT++LN  +P+Q ++  +PI    S + LKIF C  +VH HD  +    
Sbjct: 684 ILTATYLINRMPTRILNFKTPLQVFTNCNPIFRLSSTLPLKIFGCTTFVHIHDHNRGKLD 743

Query: 717 DRCH*MCFF 691
            R    C F
Sbjct: 744 PRAR-KCVF 751



 Score = 31.2 bits (69), Expect(2) = 7e-08
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = -2

Query: 710 AIKCVFSLW*SPSQKGNKCFDSITKR 633
           A KCVF  + +P+QKG KCFD I+K+
Sbjct: 746 ARKCVFVGY-APTQKGYKCFDPISKK 770


>ref|XP_010496878.1| PREDICTED: uncharacterized protein LOC104773906 [Camelina sativa]
          Length = 631

 Score = 55.8 bits (133), Expect(2) = 8e-07
 Identities = 27/45 (60%), Positives = 32/45 (71%)
 Frame = -1

Query: 885 VFTACYLINGLPTKVLNGLSPIQFYSKFHPISDILLKIFDCVCYV 751
           V TACYLIN  PTKVLN LSP +  +KF P  D  L++F CVC+V
Sbjct: 515 VMTACYLINRTPTKVLNDLSPFEVLNKFKPSLD-HLRVFGCVCFV 558



 Score = 25.4 bits (54), Expect(2) = 8e-07
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -2

Query: 704 KCVFSLW*SPSQKGNKCFDSITKR 633
           KC+F  + S +QKG KC+D  T R
Sbjct: 574 KCMFVGY-STTQKGYKCYDPATSR 596


>ref|XP_012491126.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC105803458, partial [Gossypium raimondii]
          Length = 1204

 Score = 54.7 bits (130), Expect(2) = 6e-06
 Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
 Frame = -1

Query: 885 VFTACYLINGLPTKVLNGLSPIQFYSKFHP---ISDILLKIFDCVCYVHNHDSTKNNFSD 715
           V TACYLIN +P+K+LN  +P+    K  P   + ++  KIF C  +VHNH   ++    
Sbjct: 536 VLTACYLINRMPSKILNFQTPLNTLLKAFPLFHVPNLPAKIFGCKAFVHNHQPNQSKLDP 595

Query: 714 RCH*MCFF 691
           R H  C F
Sbjct: 596 RAH-TCIF 602



 Score = 23.5 bits (49), Expect(2) = 6e-06
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 701 CVFSLW*SPSQKGNKCFDSITKR 633
           C+F  + SP+QKG KC+    +R
Sbjct: 600 CIFIGY-SPTQKGYKCYSPTLRR 621


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