BLASTX nr result
ID: Cinnamomum23_contig00028320
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00028320
(475 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010276650.1| PREDICTED: pentatricopeptide repeat-containi... 97 5e-18
ref|XP_009384372.1| PREDICTED: pentatricopeptide repeat-containi... 81 2e-13
ref|XP_010926974.1| PREDICTED: pentatricopeptide repeat-containi... 74 3e-11
ref|XP_006854804.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-07
ref|XP_010417482.1| PREDICTED: pentatricopeptide repeat-containi... 61 3e-07
ref|XP_010467983.1| PREDICTED: pentatricopeptide repeat-containi... 60 6e-07
gb|KFK37790.1| hypothetical protein AALP_AA3G029400 [Arabis alpina] 60 7e-07
ref|XP_010489658.1| PREDICTED: pentatricopeptide repeat-containi... 59 1e-06
ref|XP_006348147.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
ref|XP_004232691.2| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
ref|XP_009795211.1| PREDICTED: pentatricopeptide repeat-containi... 57 4e-06
gb|KFK28709.1| hypothetical protein AALP_AA7G036800 [Arabis alpina] 57 6e-06
ref|XP_008813633.1| PREDICTED: pentatricopeptide repeat-containi... 57 6e-06
ref|XP_011100218.1| PREDICTED: pentatricopeptide repeat-containi... 56 8e-06
ref|XP_002309579.2| hypothetical protein POPTR_0006s26170g [Popu... 56 8e-06
tpg|DAA53912.1| TPA: putative pentatricopeptide repeat family pr... 56 8e-06
tpg|DAA53911.1| TPA: putative pentatricopeptide repeat family pr... 56 8e-06
ref|XP_002884396.1| pentatricopeptide repeat-containing protein ... 56 8e-06
>ref|XP_010276650.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Nelumbo nucifera]
Length = 765
Score = 96.7 bits (239), Expect = 5e-18
Identities = 56/115 (48%), Positives = 66/115 (57%)
Frame = -1
Query: 349 MSVMGCFCSCPHPITVTLSKHXXXXXXXXXXXXXXXXXXXHVTQNNFLLSSYSKSKPLDQ 170
M ++ C S P LS H T++N LLSSYSK+K LDQ
Sbjct: 1 MDMLICSSSSPSAKIPLLSHHPTSKLPPASTQPGHCNLRSITTRSNILLSSYSKTKTLDQ 60
Query: 169 TLKLFNLLSHRDTITWNTVISACLRYGHFKAALHLFVEMLLLSCSHQCPDNLTFR 5
TLKLF LL RDT+TWNTVI+AC R G + AAL LFV+M+ S Q PDNLTFR
Sbjct: 61 TLKLFRLLPDRDTVTWNTVIAACSRQGCYMAALQLFVDMIR---SSQPPDNLTFR 112
>ref|XP_009384372.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Musa acuminata subsp. malaccensis]
Length = 608
Score = 81.3 bits (199), Expect = 2e-13
Identities = 42/73 (57%), Positives = 50/73 (68%)
Frame = -1
Query: 223 TQNNFLLSSYSKSKPLDQTLKLFNLLSHRDTITWNTVISACLRYGHFKAALHLFVEMLLL 44
T+ N SS +KSKP+D LKLF+LL RDT+TWNT ISACLR+ AAL LFV+MLL
Sbjct: 36 TRTNIFFSSAAKSKPIDHVLKLFHLLPARDTVTWNTAISACLRHCRVDAALRLFVDMLL- 94
Query: 43 SCSHQCPDNLTFR 5
S PD +T R
Sbjct: 95 -ASSPAPDAITIR 106
>ref|XP_010926974.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Elaeis guineensis]
Length = 781
Score = 74.3 bits (181), Expect = 3e-11
Identities = 37/65 (56%), Positives = 46/65 (70%)
Frame = -1
Query: 220 QNNFLLSSYSKSKPLDQTLKLFNLLSHRDTITWNTVISACLRYGHFKAALHLFVEMLLLS 41
+ N SS +KS PLD+TL+LF+LL RDT+TWNT ISA LR+G A L LF++MLL S
Sbjct: 52 RTNLFFSSVAKSHPLDRTLQLFHLLPARDTVTWNTAISATLRHGRPDATLRLFLDMLLSS 111
Query: 40 CSHQC 26
S C
Sbjct: 112 SSAPC 116
>ref|XP_006854804.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Amborella trichopoda] gi|548858508|gb|ERN16271.1|
hypothetical protein AMTR_s00063p00172440 [Amborella
trichopoda]
Length = 914
Score = 61.6 bits (148), Expect = 2e-07
Identities = 30/71 (42%), Positives = 45/71 (63%)
Frame = -1
Query: 214 NFLLSSYSKSKPLDQTLKLFNLLSHRDTITWNTVISACLRYGHFKAALHLFVEMLLLSCS 35
N + +SKS+P ++T++ FN + +DT+TWN ISA + +F ++L LFVEML S
Sbjct: 109 NTQFTIFSKSQPFEETIQFFNSMPLKDTVTWNIFISASTKQAYFDSSLQLFVEML---TS 165
Query: 34 HQCPDNLTFRS 2
H PD T R+
Sbjct: 166 HYHPDAFTIRA 176
>ref|XP_010417482.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Camelina sativa]
Length = 882
Score = 60.8 bits (146), Expect = 3e-07
Identities = 30/69 (43%), Positives = 42/69 (60%)
Frame = -1
Query: 214 NFLLSSYSKSKPLDQTLKLFNLLSHRDTITWNTVISACLRYGHFKAALHLFVEMLLLSCS 35
N L+ Y+K + +LK+FN + RDT+TWNTVISAC+R+G F+ L + +M S
Sbjct: 447 NALIDMYAKCGEVGDSLKIFNSMETRDTVTWNTVISACVRFGDFETGLQVTTQM---RKS 503
Query: 34 HQCPDNLTF 8
PD TF
Sbjct: 504 EVVPDMATF 512
>ref|XP_010467983.1| PREDICTED: pentatricopeptide repeat-containing protein At3g03580
[Camelina sativa]
Length = 883
Score = 60.1 bits (144), Expect = 6e-07
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = -1
Query: 214 NFLLSSYSKSKPLDQTLKLFNLLSHRDTITWNTVISACLRYGHFKAALHLFVEMLLLSCS 35
N L+ Y+K + +LK+FN + RDT+TWNTVISAC+R+G F L + +M S
Sbjct: 448 NALIDMYAKCGEVGDSLKVFNSMGTRDTVTWNTVISACVRFGDFATGLQVTTQM---RKS 504
Query: 34 HQCPDNLTF 8
PD TF
Sbjct: 505 EAVPDMATF 513
>gb|KFK37790.1| hypothetical protein AALP_AA3G029400 [Arabis alpina]
Length = 882
Score = 59.7 bits (143), Expect = 7e-07
Identities = 30/73 (41%), Positives = 43/73 (58%)
Frame = -1
Query: 226 VTQNNFLLSSYSKSKPLDQTLKLFNLLSHRDTITWNTVISACLRYGHFKAALHLFVEMLL 47
V+ N L+ Y+K + +LK+FN + RD +TWNTVISAC+R+G F L + +M+
Sbjct: 443 VSVRNALIDMYAKCGEVGDSLKIFNSMEIRDMVTWNTVISACVRFGDFATGLQVITQMM- 501
Query: 46 LSCSHQCPDNLTF 8
S PD TF
Sbjct: 502 --NSGVVPDMATF 512
>ref|XP_010489658.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Camelina sativa]
Length = 885
Score = 58.9 bits (141), Expect = 1e-06
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = -1
Query: 214 NFLLSSYSKSKPLDQTLKLFNLLSHRDTITWNTVISACLRYGHFKAALHLFVEMLLLSCS 35
N L+ Y+K + +LK+FN + RDT+TWNTVISAC+R+G F L + +M S
Sbjct: 450 NALIDMYAKCGEVGDSLKIFNSMETRDTVTWNTVISACVRFGDFATGLQVTSQM---RKS 506
Query: 34 HQCPDNLTF 8
PD TF
Sbjct: 507 KVVPDMATF 515
>ref|XP_006348147.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like isoform X1 [Solanum tuberosum]
gi|565362832|ref|XP_006348148.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g04370-like isoform X2 [Solanum tuberosum]
gi|565362834|ref|XP_006348149.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g04370-like isoform X3 [Solanum tuberosum]
Length = 753
Score = 58.2 bits (139), Expect = 2e-06
Identities = 27/68 (39%), Positives = 44/68 (64%)
Frame = -1
Query: 214 NFLLSSYSKSKPLDQTLKLFNLLSHRDTITWNTVISACLRYGHFKAALHLFVEMLLLSCS 35
N L++ YSK L Q L +F+++ +RD ++WN +++ + GH ALHLF EM + +
Sbjct: 402 NSLITMYSKCGYLKQALIVFHMIKNRDVVSWNAIVAGNAQNGHLSMALHLFNEMRI---A 458
Query: 34 HQCPDNLT 11
HQ PD++T
Sbjct: 459 HQRPDSVT 466
>ref|XP_004232691.2| PREDICTED: pentatricopeptide repeat-containing protein At4g04370
[Solanum lycopersicum] gi|723673781|ref|XP_010316575.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g04370 [Solanum lycopersicum]
Length = 753
Score = 58.2 bits (139), Expect = 2e-06
Identities = 27/68 (39%), Positives = 44/68 (64%)
Frame = -1
Query: 214 NFLLSSYSKSKPLDQTLKLFNLLSHRDTITWNTVISACLRYGHFKAALHLFVEMLLLSCS 35
N L++ YSK L Q L +F+++ +RD ++WN +++ + GH ALHLF EM + +
Sbjct: 402 NSLITMYSKCGYLKQALIVFHMIKNRDVVSWNAIVAGNAQNGHLSMALHLFNEMRI---A 458
Query: 34 HQCPDNLT 11
HQ PD++T
Sbjct: 459 HQRPDSVT 466
>ref|XP_009795211.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04370
[Nicotiana sylvestris]
Length = 755
Score = 57.4 bits (137), Expect = 4e-06
Identities = 27/68 (39%), Positives = 43/68 (63%)
Frame = -1
Query: 214 NFLLSSYSKSKPLDQTLKLFNLLSHRDTITWNTVISACLRYGHFKAALHLFVEMLLLSCS 35
N L++ YSK L Q L +F+++ RD ++WN +++ + GH ALHLF EM + +
Sbjct: 404 NSLVTMYSKCGYLKQALAVFDMIKGRDVVSWNAIVAGNAQNGHLAMALHLFNEMRI---A 460
Query: 34 HQCPDNLT 11
HQ PD++T
Sbjct: 461 HQRPDSIT 468
>gb|KFK28709.1| hypothetical protein AALP_AA7G036800 [Arabis alpina]
Length = 774
Score = 56.6 bits (135), Expect = 6e-06
Identities = 31/71 (43%), Positives = 41/71 (57%)
Frame = -1
Query: 214 NFLLSSYSKSKPLDQTLKLFNLLSHRDTITWNTVISACLRYGHFKAALHLFVEMLLLSCS 35
N LLS YSK D KLF ++S DT+TWN +IS C++ G + +L F EM+ S
Sbjct: 209 NSLLSMYSKCGCFDDACKLFRMMSRVDTVTWNCMISGCVQSGLMEESLVFFSEMI---SS 265
Query: 34 HQCPDNLTFRS 2
PD +TF S
Sbjct: 266 GVLPDAITFSS 276
>ref|XP_008813633.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18840
[Phoenix dactylifera]
Length = 426
Score = 56.6 bits (135), Expect = 6e-06
Identities = 28/69 (40%), Positives = 40/69 (57%)
Frame = -1
Query: 214 NFLLSSYSKSKPLDQTLKLFNLLSHRDTITWNTVISACLRYGHFKAALHLFVEMLLLSCS 35
NF++S YS +DQ+ +LFNL+ RD ++WN +I+ C R G F + LF EM
Sbjct: 108 NFMISGYSNLGLVDQSRELFNLMPVRDIVSWNAMITGCARAGRFDEVISLFQEM---QYG 164
Query: 34 HQCPDNLTF 8
+ PD TF
Sbjct: 165 NVWPDECTF 173
>ref|XP_011100218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g58590
[Sesamum indicum]
Length = 733
Score = 56.2 bits (134), Expect = 8e-06
Identities = 28/69 (40%), Positives = 42/69 (60%)
Frame = -1
Query: 208 LLSSYSKSKPLDQTLKLFNLLSHRDTITWNTVISACLRYGHFKAALHLFVEMLLLSCSHQ 29
L+SSY+++ ++T +L+ + + DTI+WN +I+AC R G +K LF M S
Sbjct: 480 LISSYARNGHFEKTQELYAAVENPDTISWNILIAACSRNGDYKETFELFGHM---RASEL 536
Query: 28 CPDNLTFRS 2
CPDN TF S
Sbjct: 537 CPDNYTFVS 545
>ref|XP_002309579.2| hypothetical protein POPTR_0006s26170g [Populus trichocarpa]
gi|550337114|gb|EEE93102.2| hypothetical protein
POPTR_0006s26170g [Populus trichocarpa]
Length = 854
Score = 56.2 bits (134), Expect = 8e-06
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = -1
Query: 217 NNFLLSSYSKSKPLDQTLKLFNLLSHRDTITWNTVISACLRYGHFKAALHLFVEMLLLSC 38
NN L+ YSK L + +LF ++HRD I+WNT+IS + G ++ AL LF EML+
Sbjct: 171 NNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLV--- 227
Query: 37 SHQCPDNLTFRS 2
S PD +T S
Sbjct: 228 SGVLPDEITMVS 239
>tpg|DAA53912.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 878
Score = 56.2 bits (134), Expect = 8e-06
Identities = 31/75 (41%), Positives = 44/75 (58%)
Frame = -1
Query: 226 VTQNNFLLSSYSKSKPLDQTLKLFNLLSHRDTITWNTVISACLRYGHFKAALHLFVEMLL 47
V + LL Y+K LD+ ++ FN + +++ITWN VISA +YG K A+ +F M
Sbjct: 154 VFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSM-- 211
Query: 46 LSCSHQCPDNLTFRS 2
L C CPD +TF S
Sbjct: 212 LHCGF-CPDPVTFLS 225
>tpg|DAA53911.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 491
Score = 56.2 bits (134), Expect = 8e-06
Identities = 31/75 (41%), Positives = 44/75 (58%)
Frame = -1
Query: 226 VTQNNFLLSSYSKSKPLDQTLKLFNLLSHRDTITWNTVISACLRYGHFKAALHLFVEMLL 47
V + LL Y+K LD+ ++ FN + +++ITWN VISA +YG K A+ +F M
Sbjct: 154 VFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSM-- 211
Query: 46 LSCSHQCPDNLTFRS 2
L C CPD +TF S
Sbjct: 212 LHCGF-CPDPVTFLS 225
>ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330236|gb|EFH60655.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 882
Score = 56.2 bits (134), Expect = 8e-06
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = -1
Query: 217 NNFLLSSYSKSKPLDQTLKLFNLLSHRDTITWNTVISACLRYGHFKAALHLFVEM 53
+N L+ Y+K + +LK+FN + DT+TWNTVISAC+R+G F L + +M
Sbjct: 446 SNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQM 500