BLASTX nr result

ID: Cinnamomum23_contig00028261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00028261
         (280 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009789007.1| PREDICTED: 30S ribosomal protein S5, chlorop...    61   3e-07
ref|XP_009589348.1| PREDICTED: 30S ribosomal protein S5, chlorop...    61   3e-07
ref|XP_011086055.1| PREDICTED: 30S ribosomal protein S5, chlorop...    60   7e-07
ref|XP_004232896.1| PREDICTED: 30S ribosomal protein S5, chlorop...    59   1e-06
ref|XP_006347020.1| PREDICTED: 30S ribosomal protein S5, chlorop...    57   6e-06
ref|XP_009604350.1| PREDICTED: 30S ribosomal protein S5, chlorop...    56   8e-06

>ref|XP_009789007.1| PREDICTED: 30S ribosomal protein S5, chloroplastic [Nicotiana
           sylvestris]
          Length = 297

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 31/56 (55%), Positives = 35/56 (62%)
 Frame = -1

Query: 169 KLTPTKVNPSDINTIFFDNTDSEEISTFSXXXXXXXXXXXPSFDEGPFESEDEIAK 2
           KL P  VN + + T FFDNTD EEISTF            PSFD+GP ESED+IAK
Sbjct: 41  KLKPITVNSTTVETTFFDNTDPEEISTFDPPERPEDFIEPPSFDDGPLESEDDIAK 96


>ref|XP_009589348.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Nicotiana
           tomentosiformis]
          Length = 215

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 33/63 (52%), Positives = 38/63 (60%)
 Frame = -1

Query: 190 KPLSLRHKLTPTKVNPSDINTIFFDNTDSEEISTFSXXXXXXXXXXXPSFDEGPFESEDE 11
           KP+ L  KL P   N + + T FFDNTD EEISTF            PSFD+GP ESED+
Sbjct: 35  KPIHLS-KLKPITANSTTVETTFFDNTDPEEISTFDPPERPEDFIEPPSFDDGPLESEDD 93

Query: 10  IAK 2
           IAK
Sbjct: 94  IAK 96


>ref|XP_011086055.1| PREDICTED: 30S ribosomal protein S5, chloroplastic [Sesamum
           indicum]
          Length = 305

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
 Frame = -1

Query: 190 KPLSLR---HKLTPTKVNPSDINTIFFDNTDSEEISTFSXXXXXXXXXXXPSFDEGPFES 20
           KPLSL    HKL P + N +D++T FFD  D EEIS +S           PSFDEGP ES
Sbjct: 39  KPLSLSKLTHKLPPARAN-ADLDTTFFDTVDPEEISAYSPPEPPEDFIPPPSFDEGPVES 97

Query: 19  EDEIAK 2
           ED+IA+
Sbjct: 98  EDDIAR 103


>ref|XP_004232896.1| PREDICTED: 30S ribosomal protein S5, chloroplastic [Solanum
           lycopersicum]
          Length = 305

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 34/72 (47%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
 Frame = -1

Query: 208 IPKHPQKPLSLR---HKLTPTKVNPSDINTIFFDNTDSEEISTFSXXXXXXXXXXXPSFD 38
           IPK  Q P  L     K  P K N +   T FFDNTD EEIST+             SFD
Sbjct: 33  IPKTIQSPFHLLLNPTKFDPIKPNSTTAETTFFDNTDPEEISTYDPPERPEDFIEPASFD 92

Query: 37  EGPFESEDEIAK 2
           +GP ESE+EIAK
Sbjct: 93  DGPMESEEEIAK 104


>ref|XP_006347020.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Solanum
           tuberosum]
          Length = 305

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 33/72 (45%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
 Frame = -1

Query: 208 IPKHPQKPLSLR---HKLTPTKVNPSDINTIFFDNTDSEEISTFSXXXXXXXXXXXPSFD 38
           IPK    P  L     K  P K N +   T FFDNTD EEIST+             SFD
Sbjct: 33  IPKPNLSPFYLLLNPTKFDPIKPNSTTAETTFFDNTDPEEISTYDPPERPEDFIEPASFD 92

Query: 37  EGPFESEDEIAK 2
           +GP ESE+EIAK
Sbjct: 93  DGPMESEEEIAK 104


>ref|XP_009604350.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Nicotiana
           tomentosiformis]
          Length = 300

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 31/63 (49%), Positives = 37/63 (58%)
 Frame = -1

Query: 190 KPLSLRHKLTPTKVNPSDINTIFFDNTDSEEISTFSXXXXXXXXXXXPSFDEGPFESEDE 11
           KP+ L  KL P   + + + T FFDNTD EEISTF            P FD+GP ESED+
Sbjct: 38  KPIHLL-KLKPITASSTTVETTFFDNTDPEEISTFDPPERPEDFIEPPFFDDGPLESEDD 96

Query: 10  IAK 2
           IAK
Sbjct: 97  IAK 99


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