BLASTX nr result
ID: Cinnamomum23_contig00028213
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00028213
(369 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI37206.3| unnamed protein product [Vitis vinifera] 83 8e-14
ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containi... 83 8e-14
ref|XP_011032027.1| PREDICTED: pentatricopeptide repeat-containi... 79 1e-12
ref|XP_006385606.1| pentatricopeptide repeat-containing family p... 77 3e-12
gb|AAF81338.1|AC007767_18 Contains similarity to a hypothetical ... 76 8e-12
ref|NP_564401.1| pentatricopeptide repeat-containing protein [Ar... 76 8e-12
ref|XP_010499791.1| PREDICTED: pentatricopeptide repeat-containi... 73 6e-11
ref|XP_008229696.1| PREDICTED: pentatricopeptide repeat-containi... 73 6e-11
ref|XP_010274610.1| PREDICTED: pentatricopeptide repeat-containi... 73 8e-11
ref|XP_006306842.1| hypothetical protein CARUB_v10008386mg [Caps... 72 1e-10
ref|XP_010463076.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_006415198.1| hypothetical protein EUTSA_v10006886mg [Eutr... 72 1e-10
ref|XP_002890989.1| predicted protein [Arabidopsis lyrata subsp.... 71 3e-10
ref|XP_009114882.1| PREDICTED: pentatricopeptide repeat-containi... 70 7e-10
ref|XP_008364513.1| PREDICTED: pentatricopeptide repeat-containi... 69 9e-10
ref|XP_008346536.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 69 9e-10
ref|XP_008373752.1| PREDICTED: pentatricopeptide repeat-containi... 69 9e-10
ref|XP_008373707.1| PREDICTED: pentatricopeptide repeat-containi... 69 9e-10
ref|XP_010934876.1| PREDICTED: pentatricopeptide repeat-containi... 68 2e-09
ref|XP_009339406.1| PREDICTED: pentatricopeptide repeat-containi... 68 3e-09
>emb|CBI37206.3| unnamed protein product [Vitis vinifera]
Length = 664
Score = 82.8 bits (203), Expect = 8e-14
Identities = 49/109 (44%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Frame = -1
Query: 324 MPQSSFHQLRTFLSRFNHCLRSLHAANHRTQLFLSTVDHPALDGYDDDEEVQLLRCLSTR 145
MP +F LS +C R H + Q+ LS + L +DD Q+L CLS +
Sbjct: 1 MPAFNFRAFIFSLSSNLYC-RRFHVHRFKPQIPLSGTHYSKLR-FDDS---QILECLSQQ 55
Query: 144 ALQQARHLLDKMPQRRI-SRVVRWTSLLSKYAREGFVDEARELFHLMPE 1
L++ARH+LD+MP R + RVV WTSLLSK+++ GF+DEAR LF +MPE
Sbjct: 56 RLREARHMLDEMPNRGVLDRVVCWTSLLSKFSKNGFIDEARALFEIMPE 104
>ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial [Vitis vinifera]
Length = 743
Score = 82.8 bits (203), Expect = 8e-14
Identities = 49/109 (44%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Frame = -1
Query: 324 MPQSSFHQLRTFLSRFNHCLRSLHAANHRTQLFLSTVDHPALDGYDDDEEVQLLRCLSTR 145
MP +F LS +C R H + Q+ LS + L +DD Q+L CLS +
Sbjct: 1 MPAFNFRAFIFSLSSNLYC-RRFHVHRFKPQIPLSGTHYSKLR-FDDS---QILECLSQQ 55
Query: 144 ALQQARHLLDKMPQRRI-SRVVRWTSLLSKYAREGFVDEARELFHLMPE 1
L++ARH+LD+MP R + RVV WTSLLSK+++ GF+DEAR LF +MPE
Sbjct: 56 RLREARHMLDEMPNRGVLDRVVCWTSLLSKFSKNGFIDEARALFEIMPE 104
>ref|XP_011032027.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial [Populus euphratica]
Length = 744
Score = 79.0 bits (193), Expect = 1e-12
Identities = 53/111 (47%), Positives = 69/111 (62%), Gaps = 3/111 (2%)
Frame = -1
Query: 324 MPQSSFHQLRTFLSRFNHCLR--SLHAANHRTQLFLSTVDHPALDGYDDDEEVQLLRCLS 151
MP F L+T LS+ + LR S H ++Q +S + L DD QLL LS
Sbjct: 1 MPAFCFKTLKTSLSKISLKLRFFSPHIRFLKSQSEVSKTHYSKLT-LDDS---QLLCLLS 56
Query: 150 TRALQQARHLLDKMPQR-RISRVVRWTSLLSKYAREGFVDEARELFHLMPE 1
+ LQQAR+LLDK P+R R SR+ WTSLL+KY+R GF+DE+R LF +MPE
Sbjct: 57 QQKLQQARNLLDKFPKRSRHSRIAHWTSLLTKYSRIGFIDESRVLFDIMPE 107
>ref|XP_006385606.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550342735|gb|ERP63403.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 744
Score = 77.4 bits (189), Expect = 3e-12
Identities = 52/111 (46%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
Frame = -1
Query: 324 MPQSSFHQLRTFLSRFNHCLR--SLHAANHRTQLFLSTVDHPALDGYDDDEEVQLLRCLS 151
MP F L+ LS+ + LR S H ++Q +S + L DD QLL LS
Sbjct: 1 MPAFCFKTLKISLSKISLKLRFFSPHVRFLKSQSEVSKTHYSKLT-LDDS---QLLCMLS 56
Query: 150 TRALQQARHLLDKMPQR-RISRVVRWTSLLSKYAREGFVDEARELFHLMPE 1
+ LQQAR+LLDK P+R R SR+ WTSLL+KY+R GF+DE+R LF +MPE
Sbjct: 57 QQKLQQARNLLDKFPERSRHSRIAHWTSLLTKYSRIGFIDESRVLFDIMPE 107
>gb|AAF81338.1|AC007767_18 Contains similarity to a hypothetical protein F19I3.26 gi|7485810
from Arabidopsis thaliana BAC F19I3 gb|AC004238. It
contains a PPR repeat domain PF|01535. ESTs gb|AV539170,
gb|AV551571, gb|AA597781, gb|AV544524, gb|AV531577 and
gb|AV533492 come from this gene [Arabidopsis thaliana]
Length = 864
Score = 76.3 bits (186), Expect = 8e-12
Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Frame = -1
Query: 183 DEEVQLLRCLSTRALQQARHLLDKMPQR-RISRVVRWTSLLSKYAREGFVDEARELFHLM 7
+EE +LR LS L ARHLLDK+PQR I+RVV WTSLLSKYA+ G++DEAR LF +M
Sbjct: 147 NEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVM 206
Query: 6 PE 1
PE
Sbjct: 207 PE 208
>ref|NP_564401.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806407|sp|P0C7R0.1|PPR69_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g32415, mitochondrial; Flags: Precursor
gi|332193363|gb|AEE31484.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 76.3 bits (186), Expect = 8e-12
Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Frame = -1
Query: 183 DEEVQLLRCLSTRALQQARHLLDKMPQR-RISRVVRWTSLLSKYAREGFVDEARELFHLM 7
+EE +LR LS L ARHLLDK+PQR I+RVV WTSLLSKYA+ G++DEAR LF +M
Sbjct: 44 NEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVM 103
Query: 6 PE 1
PE
Sbjct: 104 PE 105
>ref|XP_010499791.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial [Camelina sativa]
Length = 749
Score = 73.2 bits (178), Expect = 6e-11
Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = -1
Query: 183 DEEVQLLRCLSTRALQQARHLLDKMPQRRI-SRVVRWTSLLSKYAREGFVDEARELFHLM 7
+EE +LR LS L ARHLLDK+PQR SRV+ WTSLL+KYA+ G++DEAR LF +M
Sbjct: 32 NEEALILRRLSEGGLVHARHLLDKIPQRGSNSRVIYWTSLLTKYAKAGYLDEARVLFEVM 91
Query: 6 PE 1
PE
Sbjct: 92 PE 93
>ref|XP_008229696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial [Prunus mume]
Length = 752
Score = 73.2 bits (178), Expect = 6e-11
Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = -1
Query: 243 HRTQLFLSTVDHPALDGYDDDEEVQLLRCLSTRALQQARHLLDKMPQRRI-SRVVRWTSL 67
++TQ+ S H L D QLL CLS +AR LL+K+P R RVV WTSL
Sbjct: 30 YKTQIAFSRTHHAKLTSDDS----QLLHCLSQNLFGEARKLLEKLPARNSHGRVVHWTSL 85
Query: 66 LSKYAREGFVDEARELFHLMPE 1
L+KY+R G VDEAR LF +MPE
Sbjct: 86 LTKYSRSGCVDEARMLFEIMPE 107
>ref|XP_010274610.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial [Nelumbo nucifera]
Length = 757
Score = 72.8 bits (177), Expect = 8e-11
Identities = 40/64 (62%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Frame = -1
Query: 189 DDDEEVQLLRCLSTRALQQARHLLDKMPQRRI-SRVVRWTSLLSKYAREGFVDEARELFH 13
D D+ LL+ L LQ+AR LLD+MPQR S VV WTS+L+KYAR+GFVDEAR LF
Sbjct: 41 DVDDPQLLLQWLGEGKLQKARALLDRMPQRGSRSGVVHWTSVLTKYARDGFVDEARALFE 100
Query: 12 LMPE 1
LMPE
Sbjct: 101 LMPE 104
>ref|XP_006306842.1| hypothetical protein CARUB_v10008386mg [Capsella rubella]
gi|482575553|gb|EOA39740.1| hypothetical protein
CARUB_v10008386mg [Capsella rubella]
Length = 759
Score = 72.4 bits (176), Expect = 1e-10
Identities = 36/62 (58%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = -1
Query: 183 DEEVQLLRCLSTRALQQARHLLDKMPQR-RISRVVRWTSLLSKYAREGFVDEARELFHLM 7
+EE +LR LS L ARHLLDK+PQR +SRV+ WTSLL+K+ + G++DEAR LF +M
Sbjct: 44 NEEALILRRLSEGGLVHARHLLDKIPQRGSVSRVIYWTSLLTKFTKAGYLDEARVLFEVM 103
Query: 6 PE 1
PE
Sbjct: 104 PE 105
>ref|XP_010463076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial [Camelina sativa]
Length = 663
Score = 72.0 bits (175), Expect = 1e-10
Identities = 37/62 (59%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = -1
Query: 183 DEEVQLLRCLSTRALQQARHLLDKMPQRRI-SRVVRWTSLLSKYAREGFVDEARELFHLM 7
+EE +LR LS L ARHLLDK+PQR SRV+ WTSLL++YA+ G++DEAR LF +M
Sbjct: 35 NEEALILRRLSEGGLVHARHLLDKIPQRGSNSRVIYWTSLLTRYAKAGYLDEARVLFEVM 94
Query: 6 PE 1
PE
Sbjct: 95 PE 96
>ref|XP_006415198.1| hypothetical protein EUTSA_v10006886mg [Eutrema salsugineum]
gi|557092969|gb|ESQ33551.1| hypothetical protein
EUTSA_v10006886mg [Eutrema salsugineum]
Length = 760
Score = 72.0 bits (175), Expect = 1e-10
Identities = 36/63 (57%), Positives = 48/63 (76%), Gaps = 2/63 (3%)
Frame = -1
Query: 183 DEEVQLLRCLSTRALQQARHLLDKMPQR--RISRVVRWTSLLSKYAREGFVDEARELFHL 10
+EE +LR LS L ARHLLD++PQR ISRV+ WTSLL+KYA+ G++++AR LF +
Sbjct: 40 NEEALILRRLSEGGLVHARHLLDRVPQRGSSISRVIYWTSLLTKYAKAGYLEQARALFEV 99
Query: 9 MPE 1
MPE
Sbjct: 100 MPE 102
>ref|XP_002890989.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336831|gb|EFH67248.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 792
Score = 70.9 bits (172), Expect = 3e-10
Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = -1
Query: 183 DEEVQLLRCLSTRALQQARHLLDKMPQR-RISRVVRWTSLLSKYAREGFVDEARELFHLM 7
+EE +LR LS L ARHLLDK+PQR ISRV+ TSLL+KYA+ G++DEAR LF +M
Sbjct: 74 NEEALILRRLSEGGLVHARHLLDKIPQRGSISRVIYCTSLLTKYAKAGYLDEARVLFEVM 133
Query: 6 PE 1
PE
Sbjct: 134 PE 135
>ref|XP_009114882.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial [Brassica rapa]
gi|685360811|ref|XP_009114883.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g32415,
mitochondrial [Brassica rapa]
Length = 754
Score = 69.7 bits (169), Expect = 7e-10
Identities = 37/62 (59%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Frame = -1
Query: 183 DEEVQLLRCLSTRALQQARHLLDKMPQR-RISRVVRWTSLLSKYAREGFVDEARELFHLM 7
+EE +LR LS L ARHLLDK+PQR ISRV WTSLL+K+A+ G++ EAR LF +M
Sbjct: 44 NEEALILRRLSEGGLVHARHLLDKIPQRGSISRVKYWTSLLTKFAKAGYLHEARVLFEVM 103
Query: 6 PE 1
PE
Sbjct: 104 PE 105
>ref|XP_008364513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial-like [Malus domestica]
Length = 402
Score = 69.3 bits (168), Expect = 9e-10
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Frame = -1
Query: 180 EEVQLLRCLSTRALQQARHLLDKMPQRRI-SRVVRWTSLLSKYAREGFVDEARELFHLMP 4
++ QLL CLS Q AR LL+K+P+R RVV WT LL+KY+R G+VDEAR LF +MP
Sbjct: 47 DDSQLLHCLSQGRCQDARKLLEKLPERSSHGRVVHWTCLLTKYSRSGWVDEARMLFDIMP 106
Query: 3 E 1
E
Sbjct: 107 E 107
>ref|XP_008346536.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g32415, mitochondrial-like [Malus domestica]
Length = 611
Score = 69.3 bits (168), Expect = 9e-10
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Frame = -1
Query: 180 EEVQLLRCLSTRALQQARHLLDKMPQRRI-SRVVRWTSLLSKYAREGFVDEARELFHLMP 4
++ QLL CLS Q AR LL+K+P+R RVV WT LL+KY+R G+VDEAR LF +MP
Sbjct: 47 DDSQLLHCLSQGRCQDARKLLEKLPERSSHGRVVHWTCLLTKYSRSGWVDEARMLFDIMP 106
Query: 3 E 1
E
Sbjct: 107 E 107
>ref|XP_008373752.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial, partial [Malus domestica]
Length = 707
Score = 69.3 bits (168), Expect = 9e-10
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Frame = -1
Query: 180 EEVQLLRCLSTRALQQARHLLDKMPQRRI-SRVVRWTSLLSKYAREGFVDEARELFHLMP 4
++ QLL CLS Q AR LL+K+P+R RVV WT LL+KY+R G+VDEAR LF +MP
Sbjct: 10 DDSQLLHCLSQGRCQDARKLLEKLPERSSHGRVVHWTCLLTKYSRSGWVDEARMLFDIMP 69
Query: 3 E 1
E
Sbjct: 70 E 70
>ref|XP_008373707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial-like, partial [Malus domestica]
Length = 390
Score = 69.3 bits (168), Expect = 9e-10
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Frame = -1
Query: 180 EEVQLLRCLSTRALQQARHLLDKMPQRRI-SRVVRWTSLLSKYAREGFVDEARELFHLMP 4
++ QLL CLS Q AR LL+K+P+R RVV WT LL+KY+R G+VDEAR LF +MP
Sbjct: 47 DDSQLLHCLSQGRCQDARKLLEKLPERSSHGRVVHWTCLLTKYSRSGWVDEARMLFDIMP 106
Query: 3 E 1
E
Sbjct: 107 E 107
>ref|XP_010934876.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial [Elaeis guineensis]
Length = 742
Score = 68.2 bits (165), Expect = 2e-09
Identities = 44/89 (49%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = -1
Query: 264 RSLHAAN-HRTQLFLSTVDHPALDGYD-DDEEVQLLRCLSTRALQQARHLLDKMPQRRIS 91
RSLHA RT L P L + D E+ LLRCL R L +A LLD+ P
Sbjct: 16 RSLHATPAFRTHL-------PCLHSNNAQDPELHLLRCLCRRDLAEAHRLLDETPS---- 64
Query: 90 RVVRWTSLLSKYAREGFVDEARELFHLMP 4
VVRWT+ LS++AR+GF+DEAR LF LMP
Sbjct: 65 -VVRWTAALSRFARDGFLDEARTLFDLMP 92
>ref|XP_009339406.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial-like [Pyrus x bretschneideri]
Length = 745
Score = 67.8 bits (164), Expect = 3e-09
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = -1
Query: 243 HRTQLFLSTVDHPALDGYDDDEEVQLLRCLSTRALQQARHLLDKMPQRRI-SRVVRWTSL 67
++TQ+ S H A DD QLL CL Q AR LL+K+P+R R+V WT L
Sbjct: 30 YKTQISFSRT-HSAKLTPDDS---QLLHCLCQSRCQDARKLLEKLPERSSHGRIVHWTCL 85
Query: 66 LSKYAREGFVDEARELFHLMPE 1
L+KY+R G+VDEAR LF +MPE
Sbjct: 86 LTKYSRSGWVDEARMLFDIMPE 107