BLASTX nr result

ID: Cinnamomum23_contig00027592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00027592
         (258 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGT17039.1| hypothetical protein SHCRBa_257_A20_R_60 [Sacchar...    57   4e-06
gb|AGT15956.1| hypothetical protein SHCRBa_145_O03_R_70 [Sacchar...    57   5e-06

>gb|AGT17039.1| hypothetical protein SHCRBa_257_A20_R_60 [Saccharum hybrid cultivar
           R570]
          Length = 109

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 31/73 (42%), Positives = 42/73 (57%)
 Frame = -3

Query: 220 RENLVVATIWGKIRETHLRWFGHIQRWPLMVLVRKSLAMKVDXXXXXXXXPKRTWMEVVK 41
           R+ + VA I  K+ +  LRWFGH+QR P    VR  +  + D        PK TW E VK
Sbjct: 22  RDRVGVAPIEKKLIQHRLRWFGHVQRRPFEAPVRSGVLKQADIVKSGRGRPKLTWDESVK 81

Query: 40  IDMKKCNLSEDLA 2
            D+K+ N+S+DLA
Sbjct: 82  RDLKEWNISKDLA 94


>gb|AGT15956.1| hypothetical protein SHCRBa_145_O03_R_70 [Saccharum hybrid cultivar
           R570] gi|530278269|gb|AGT16280.1| hypothetical protein
           SHCRBa_093_A03_R_70 [Saccharum hybrid cultivar R570]
           gi|530278923|gb|AGT16831.1| putative kinase protein
           [Saccharum hybrid cultivar R570]
           gi|530279267|gb|AGT17118.1| hypothetical protein
           SHCRBa_045_A10_R_70 [Saccharum hybrid cultivar R570]
          Length = 215

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 31/73 (42%), Positives = 42/73 (57%)
 Frame = -3

Query: 220 RENLVVATIWGKIRETHLRWFGHIQRWPLMVLVRKSLAMKVDXXXXXXXXPKRTWMEVVK 41
           R+ + VA I  K+ +  LRWFGH+QR P    VR  +  + D        PK TW E VK
Sbjct: 128 RDRVGVAPIEEKLVQHRLRWFGHVQRRPSEAPVRSGVLKRADNVKSGRGRPKLTWDESVK 187

Query: 40  IDMKKCNLSEDLA 2
            D+K+ N+S+DLA
Sbjct: 188 RDLKEWNISKDLA 200


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