BLASTX nr result

ID: Cinnamomum23_contig00027481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00027481
         (392 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

prf||1211235CE ORF 79                                                  53   1e-12
ref|NP_054546.1| hypothetical protein NitaCp072 [Nicotiana tabac...    53   1e-12
ref|YP_001109547.1| hypothetical protein Poptr_cp068 [Populus tr...    65   2e-11

>prf||1211235CE ORF 79
          Length = 79

 Score = 53.1 bits (126), Expect(3) = 1e-12
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = +1

Query: 13 SIDRSCHIGPSRTSNCFDLNYPEDTL 90
          SIDRSCHIGPS TSNCFDLNYPE+ +
Sbjct: 11 SIDRSCHIGPSWTSNCFDLNYPENAM 36



 Score = 40.0 bits (92), Expect(3) = 1e-12
 Identities = 22/28 (78%), Positives = 23/28 (82%)
 Frame = +3

Query: 144 KEVNMVPK*R*ICKKQVRLRLFLILNGM 227
           KEVN VP    ICKKQVRLR+FLILNGM
Sbjct: 54  KEVNRVPIE--ICKKQVRLRVFLILNGM 79



 Score = 25.8 bits (55), Expect(3) = 1e-12
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +2

Query: 98  QKDVQSNLFLDSIE 139
           QKD QSNLFLDS++
Sbjct: 41  QKDGQSNLFLDSLK 54


>ref|NP_054546.1| hypothetical protein NitaCp072 [Nicotiana tabacum]
          gi|11466029|ref|NP_054571.1| hypothetical protein
          NitaCp098 [Nicotiana tabacum]
          gi|78102586|ref|YP_358726.1| hypothetical protein
          NisyCp082 [Nicotiana sylvestris]
          gi|78102613|ref|YP_358752.1| hypothetical protein
          NisyCp111 [Nicotiana sylvestris]
          gi|81301616|ref|YP_398912.1| hypothetical protein
          NitoCp081 [Nicotiana tomentosiformis]
          gi|81301643|ref|YP_398938.1| hypothetical protein
          NitoCp109 [Nicotiana tomentosiformis]
          gi|351653909|ref|YP_004891655.1| unnamed protein
          product (chloroplast) [Nicotiana undulata]
          gi|351653954|ref|YP_004891681.1| unnamed protein
          product (chloroplast) [Nicotiana undulata]
          gi|4388760|emb|CAA77389.1| hypothetical protein
          [Nicotiana tabacum] gi|4388762|emb|CAA77404.1|
          hypothetical protein [Nicotiana tabacum]
          gi|77799613|dbj|BAE46702.1| hypothetical protein
          [Nicotiana sylvestris] gi|77799640|dbj|BAE46729.1|
          hypothetical protein [Nicotiana sylvestris]
          gi|80750975|dbj|BAE48051.1| hypothetical protein
          [Nicotiana tomentosiformis] gi|80751002|dbj|BAE48078.1|
          hypothetical protein [Nicotiana tomentosiformis]
          gi|347453935|gb|AEO95593.1| hypothetical protein
          (chloroplast) [Nicotiana undulata]
          gi|347453980|gb|AEO95638.1| hypothetical protein
          (chloroplast) [Nicotiana undulata]
          gi|347454046|gb|AEO95703.1| hypothetical protein
          [synthetic construct] gi|347454089|gb|AEO95746.1|
          hypothetical protein [synthetic construct]
          Length = 79

 Score = 53.1 bits (126), Expect(3) = 1e-12
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = +1

Query: 13 SIDRSCHIGPSRTSNCFDLNYPEDTL 90
          SIDRSCHIGPS TSNCFDLNYPE+ +
Sbjct: 11 SIDRSCHIGPSWTSNCFDLNYPENAM 36



 Score = 40.0 bits (92), Expect(3) = 1e-12
 Identities = 22/28 (78%), Positives = 23/28 (82%)
 Frame = +3

Query: 144 KEVNMVPK*R*ICKKQVRLRLFLILNGM 227
           KEVN VP    ICKKQVRLR+FLILNGM
Sbjct: 54  KEVNRVPIE--ICKKQVRLRVFLILNGM 79



 Score = 25.8 bits (55), Expect(3) = 1e-12
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +2

Query: 98  QKDVQSNLFLDSIE 139
           QKD QSNLFLDS++
Sbjct: 41  QKDGQSNLFLDSLK 54


>ref|YP_001109547.1| hypothetical protein Poptr_cp068 [Populus trichocarpa]
           gi|134093271|ref|YP_001109572.1| hypothetical protein
           Poptr_cp095 [Populus trichocarpa]
           gi|133712108|gb|ABO36751.1| conserved hypothetical
           protein [Populus trichocarpa]
           gi|133712133|gb|ABO36776.1| conserved hypothetical
           protein [Populus trichocarpa]
          Length = 61

 Score = 65.5 bits (158), Expect(2) = 2e-11
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +1

Query: 4   WSISIDRSCHIGPSRTSNCFDLNYPEDTLYI 96
           WSISIDRSCHIGPS+TSNCFDLNYPED L I
Sbjct: 10  WSISIDRSCHIGPSQTSNCFDLNYPEDALSI 40



 Score = 30.0 bits (66), Expect(2) = 2e-11
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +2

Query: 98  QKDVQSNLFLDSIEAQR 148
           QK+ QSNLFLDSIEA+R
Sbjct: 43  QKNGQSNLFLDSIEAKR 59


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