BLASTX nr result
ID: Cinnamomum23_contig00027104
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00027104
(433 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010533307.1| PREDICTED: uncharacterized protein LOC104809... 88 4e-27
gb|KFK29169.1| hypothetical protein AALP_AA7G098300 [Arabis alpina] 87 1e-24
ref|XP_010513208.1| PREDICTED: uncharacterized protein LOC104789... 85 2e-24
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas... 79 9e-24
emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera] 96 9e-18
emb|CAA12930.1| reverse transcriptase [Ginkgo biloba] 95 2e-17
emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera] 93 6e-17
emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera] 93 8e-17
gb|KFK39596.1| hypothetical protein AALP_AA3G264600 [Arabis alpina] 92 1e-16
ref|XP_010497072.1| PREDICTED: uncharacterized protein K02A2.6-l... 91 4e-16
ref|XP_010541181.1| PREDICTED: uncharacterized protein LOC104814... 90 5e-16
gb|KFK41015.1| hypothetical protein AALP_AA2G074100 [Arabis alpina] 89 1e-15
gb|KFK24528.1| hypothetical protein AALP_AAs46225U000100, partia... 89 1e-15
ref|XP_010468466.1| PREDICTED: uncharacterized protein LOC104748... 87 3e-15
gb|KFK23993.1| hypothetical protein AALP_AAs48021U000700 [Arabis... 87 4e-15
gb|KFK23991.1| hypothetical protein AALP_AAs48021U000700 [Arabis... 87 4e-15
ref|XP_009150826.1| PREDICTED: uncharacterized protein LOC103874... 86 7e-15
gb|ADF45984.1| reverse transcriptase, partial [Eleocharis mamill... 86 7e-15
gb|ABB47037.1| retrotransposon protein, putative, unclassified, ... 83 6e-14
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ... 83 6e-14
>ref|XP_010533307.1| PREDICTED: uncharacterized protein LOC104809111 [Tarenaya
hassleriana]
Length = 1195
Score = 88.2 bits (217), Expect(2) = 4e-27
Identities = 43/62 (69%), Positives = 51/62 (82%)
Frame = +2
Query: 170 KAAF*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVYIRTRND 349
K AF HDGHY FLVMPFGLTNAP+TFQ+LMND+FR +L + VLVFFD+ILVY + +D
Sbjct: 657 KTAFRTHDGHYE-FLVMPFGLTNAPATFQALMNDVFRPFLRRFVLVFFDDILVYSSSMSD 715
Query: 350 HL 355
HL
Sbjct: 716 HL 717
Score = 59.7 bits (143), Expect(2) = 4e-27
Identities = 29/41 (70%), Positives = 32/41 (78%)
Frame = +3
Query: 48 KTPIPVIDELLDELNGAAFFFKLDLRTRYHHIRVKERHVLK 170
K PIPVID+LLDELNGAA F KLDLR YH IR+KE + K
Sbjct: 617 KFPIPVIDQLLDELNGAAVFSKLDLRAGYHQIRMKEADIPK 657
>gb|KFK29169.1| hypothetical protein AALP_AA7G098300 [Arabis alpina]
Length = 1214
Score = 86.7 bits (213), Expect(2) = 1e-24
Identities = 41/61 (67%), Positives = 50/61 (81%)
Frame = +2
Query: 170 KAAF*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVYIRTRND 349
K AF HDGHY FLVMPFGLTNAP+TFQSLM+D+FR +L + VLVFFD+IL+Y +T +
Sbjct: 474 KTAFRTHDGHYE-FLVMPFGLTNAPTTFQSLMDDVFRQFLRRFVLVFFDDILIYSKTEAE 532
Query: 350 H 352
H
Sbjct: 533 H 533
Score = 52.8 bits (125), Expect(2) = 1e-24
Identities = 25/39 (64%), Positives = 29/39 (74%)
Frame = +3
Query: 54 PIPVIDELLDELNGAAFFFKLDLRTRYHHIRVKERHVLK 170
PIP+ID+LLDEL+GA F KLD+R YH IRVK V K
Sbjct: 436 PIPMIDQLLDELHGAIMFSKLDMRAGYHQIRVKAEDVPK 474
>ref|XP_010513208.1| PREDICTED: uncharacterized protein LOC104789170 [Camelina sativa]
Length = 574
Score = 84.7 bits (208), Expect(2) = 2e-24
Identities = 44/66 (66%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
Frame = +2
Query: 167 KKAAF*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVY---IR 337
+K AF H GHY FLVMPFGLTNAPSTFQS+MND+FR YL + VLVFFD+ILVY ++
Sbjct: 506 EKTAFKTHHGHYE-FLVMPFGLTNAPSTFQSIMNDLFRPYLRRFVLVFFDDILVYSPDVQ 564
Query: 338 TRNDHL 355
T HL
Sbjct: 565 THKTHL 570
Score = 53.9 bits (128), Expect(2) = 2e-24
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +3
Query: 54 PIPVIDELLDELNGAAFFFKLDLRTRYHHIRVKERHVLK 170
PIPVI+ELLDEL+GA F K+DL++ YH IR+KE V K
Sbjct: 469 PIPVIEELLDELSGATVFSKIDLKSGYHQIRLKEEDVEK 507
>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
finger, CCHC-type; Peptidase aspartic, active site;
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 1297
Score = 79.3 bits (194), Expect(2) = 9e-24
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = +2
Query: 170 KAAF*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVYIRTRND 349
K AF H+ HY +LVMPFGL NAPSTFQSLMND+FR+ L K VLVFFD+ILVY +
Sbjct: 489 KTAFRTHEDHYE-YLVMPFGLMNAPSTFQSLMNDVFRLLLRKFVLVFFDDILVYSQDWKT 547
Query: 350 HL 355
H+
Sbjct: 548 HM 549
Score = 57.4 bits (137), Expect(2) = 9e-24
Identities = 26/41 (63%), Positives = 33/41 (80%)
Frame = +3
Query: 48 KTPIPVIDELLDELNGAAFFFKLDLRTRYHHIRVKERHVLK 170
K PIPVI+ELLDEL+GA F+ KLDL++ YH +RVKE + K
Sbjct: 449 KFPIPVIEELLDELHGARFYSKLDLKSGYHQVRVKEEDIHK 489
>emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]
Length = 1371
Score = 95.9 bits (237), Expect = 9e-18
Identities = 61/123 (49%), Positives = 80/123 (65%), Gaps = 5/123 (4%)
Frame = +2
Query: 2 LCIDY*ALNEITIKEKNSHTRDR*II----G*T*WRCILL*VRPSH-QVSPHPSQGAPCF 166
LC+DY ALN++T+K+K ++ G T + I L R + Q+ H P
Sbjct: 649 LCVDYRALNQVTVKDKFPIPVIEELLEELGGSTIFSKIDL--RSGYWQIRMHE----PDV 702
Query: 167 KKAAF*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVYIRTRN 346
K AF H+GHY FLVMPFGLTNAPSTFQSLMN+IF+ YL K +LVFFD+IL+Y R+ +
Sbjct: 703 PKTAFKTHEGHYE-FLVMPFGLTNAPSTFQSLMNNIFQPYLRKFILVFFDDILIYSRSFS 761
Query: 347 DHL 355
DH+
Sbjct: 762 DHI 764
>emb|CAA12930.1| reverse transcriptase [Ginkgo biloba]
Length = 138
Score = 94.7 bits (234), Expect = 2e-17
Identities = 58/120 (48%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Frame = +2
Query: 2 LCIDY*ALNEITIKEKNSHTRDR*IIG*T*WRCIL--L*VRPSHQVSPHPSQGAPCFKKA 175
LC+DY LN+IT+K+K ++ C L +R + P K
Sbjct: 1 LCVDYRELNKITVKDKYPIPIIDELLDELHGACFFSKLDLRSGYHQIRLKEVDTP---KI 57
Query: 176 AF*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVYIRTRNDHL 355
AF HDGHY FLVMPFGLTNAPSTFQSLMN IF +YL + +LVFFD+IL+Y +T +DHL
Sbjct: 58 AFRTHDGHYE-FLVMPFGLTNAPSTFQSLMNQIFCLYLQRFILVFFDDILIYSKTWSDHL 116
>emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera]
Length = 1357
Score = 93.2 bits (230), Expect = 6e-17
Identities = 60/123 (48%), Positives = 79/123 (64%), Gaps = 5/123 (4%)
Frame = +2
Query: 2 LCIDY*ALNEITIKEKNSHTRDR*II----G*T*WRCILL*VRPSH-QVSPHPSQGAPCF 166
LC+DY ALN++T+K+K ++ G T + I L R + Q+ H P
Sbjct: 564 LCVDYRALNQVTVKDKFPIPVIEELLEELGGSTIFSKIDL--RSGYWQIRMHE----PDV 617
Query: 167 KKAAF*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVYIRTRN 346
K AF H+GHY FLVMPFGLTNAPSTFQSLMN+IF+ YL K + VFFD+IL+Y R+ +
Sbjct: 618 PKTAFKTHEGHYE-FLVMPFGLTNAPSTFQSLMNNIFQPYLRKFIPVFFDDILIYSRSFS 676
Query: 347 DHL 355
DH+
Sbjct: 677 DHI 679
>emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]
Length = 1412
Score = 92.8 bits (229), Expect = 8e-17
Identities = 60/123 (48%), Positives = 79/123 (64%), Gaps = 5/123 (4%)
Frame = +2
Query: 2 LCIDY*ALNEITIKEKNSHTRDR*II----G*T*WRCILL*VRPSH-QVSPHPSQGAPCF 166
LC+DY ALN++T+K+K ++ G T + I L R + Q+ H P
Sbjct: 649 LCVDYRALNQVTVKDKFPIPVIEELLEELGGSTIFSKIDL--RSGYWQIRMHE----PDV 702
Query: 167 KKAAF*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVYIRTRN 346
K AF H+GHY FLVM FGLTNAPSTFQSLMN+IF+ YL K +LVFFD+IL+Y R+ +
Sbjct: 703 PKTAFKTHEGHYE-FLVMSFGLTNAPSTFQSLMNNIFQPYLRKFILVFFDDILIYSRSFS 761
Query: 347 DHL 355
DH+
Sbjct: 762 DHI 764
>gb|KFK39596.1| hypothetical protein AALP_AA3G264600 [Arabis alpina]
Length = 1419
Score = 92.0 bits (227), Expect = 1e-16
Identities = 56/119 (47%), Positives = 73/119 (61%), Gaps = 2/119 (1%)
Frame = +2
Query: 2 LCIDY*ALNEITIKEKNSHTRDR*IIG*T*WRCIL--L*VRPSHQVSPHPSQGAPCFKKA 175
LC+DY ALN++T+ + + ++ + L +R + + P K
Sbjct: 553 LCVDYKALNKVTVGDSFPISMIDQLLDELNGAAVFSKLDLRSGYHQILVKAADVP---KT 609
Query: 176 AF*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVYIRTRNDH 352
AF HDGHY FLVMPFGLTNAP+TFQS+MND+FR YL K VLVFFD+ILVY RT +H
Sbjct: 610 AFHTHDGHYE-FLVMPFGLTNAPATFQSVMNDVFRKYLRKFVLVFFDDILVYSRTLAEH 667
>ref|XP_010497072.1| PREDICTED: uncharacterized protein K02A2.6-like [Camelina sativa]
Length = 745
Score = 90.5 bits (223), Expect = 4e-16
Identities = 44/61 (72%), Positives = 51/61 (83%)
Frame = +2
Query: 170 KAAF*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVYIRTRND 349
K AF HDGHY FLVMPFGLTNAP+TFQSLMND+FR +L K VLVFFD+ILVY R++ +
Sbjct: 612 KTAFRSHDGHYE-FLVMPFGLTNAPTTFQSLMNDVFRPFLRKFVLVFFDDILVYSRSKEE 670
Query: 350 H 352
H
Sbjct: 671 H 671
>ref|XP_010541181.1| PREDICTED: uncharacterized protein LOC104814705 [Tarenaya
hassleriana]
Length = 1805
Score = 90.1 bits (222), Expect = 5e-16
Identities = 57/120 (47%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Frame = +2
Query: 5 CIDY*ALNEITIKEKNSHTRDR*IIG*T*WRCIL--L*VRPSHQVSPHPSQGAPCFKKAA 178
CIDY ALN++T+ +K ++ + L +R + ++ P K A
Sbjct: 31 CIDYRALNKVTVLDKFPIPMIDQLLDELHGARVFSKLDLRSGYHQIRMKTEDIP---KTA 87
Query: 179 F*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVYIRTRNDHLT 358
F HDGHY FLVMPFGLTNAP+TFQ+LMN+IFR YL K VLVFFD+ILVY + DH T
Sbjct: 88 FRTHDGHYE-FLVMPFGLTNAPATFQALMNEIFRPYLRKFVLVFFDDILVYSCSLQDHAT 146
Score = 90.1 bits (222), Expect = 5e-16
Identities = 57/120 (47%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Frame = +2
Query: 5 CIDY*ALNEITIKEKNSHTRDR*IIG*T*WRCIL--L*VRPSHQVSPHPSQGAPCFKKAA 178
CIDY ALN++T+ +K ++ + L +R + ++ P K A
Sbjct: 903 CIDYRALNKVTVLDKFPIPMIDQLLDELHGARVFSKLDLRSGYHQIRMKTEDIP---KTA 959
Query: 179 F*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVYIRTRNDHLT 358
F HDGHY FLVMPFGLTNAP+TFQ+LMN+IFR YL K VLVFFD+ILVY + DH T
Sbjct: 960 FRTHDGHYE-FLVMPFGLTNAPATFQALMNEIFRPYLRKFVLVFFDDILVYSCSLQDHAT 1018
>gb|KFK41015.1| hypothetical protein AALP_AA2G074100 [Arabis alpina]
Length = 1539
Score = 89.0 bits (219), Expect = 1e-15
Identities = 44/61 (72%), Positives = 50/61 (81%)
Frame = +2
Query: 170 KAAF*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVYIRTRND 349
K AF HDGHY FLVMPFGLTNAP+TFQSLMND+FR YL K VLVFFD+ILVY ++ +
Sbjct: 743 KTAFRTHDGHYE-FLVMPFGLTNAPATFQSLMNDVFRGYLRKFVLVFFDDILVYSKSLQE 801
Query: 350 H 352
H
Sbjct: 802 H 802
>gb|KFK24528.1| hypothetical protein AALP_AAs46225U000100, partial [Arabis alpina]
Length = 1552
Score = 89.0 bits (219), Expect = 1e-15
Identities = 44/61 (72%), Positives = 50/61 (81%)
Frame = +2
Query: 170 KAAF*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVYIRTRND 349
K AF HDGHY FLVMPFGLTNAP+TFQSLMND+FR YL K VLVFFD+ILVY ++ +
Sbjct: 749 KTAFRTHDGHYE-FLVMPFGLTNAPATFQSLMNDVFRGYLRKFVLVFFDDILVYSKSLQE 807
Query: 350 H 352
H
Sbjct: 808 H 808
>ref|XP_010468466.1| PREDICTED: uncharacterized protein LOC104748542 [Camelina sativa]
Length = 1813
Score = 87.4 bits (215), Expect = 3e-15
Identities = 55/120 (45%), Positives = 73/120 (60%), Gaps = 3/120 (2%)
Frame = +2
Query: 5 CIDY*ALNEITIKEKNSHTRDR*IIG*T*WRCIL--L*VRPS-HQVSPHPSQGAPCFKKA 175
C+DY ALN+ TI +K ++ I L +R HQ+ S +K
Sbjct: 1005 CVDYRALNQATIPDKFPIPMIDQLLDELDGAIIFSKLDLRAGYHQIRMKESD----VEKT 1060
Query: 176 AF*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVYIRTRNDHL 355
AF HDGHY FLVMPFGLTNAP+TFQ+LMN++FR YL K +LVFFD+IL+Y + +H+
Sbjct: 1061 AFRTHDGHYE-FLVMPFGLTNAPATFQALMNELFRPYLRKFILVFFDDILIYSASLEEHV 1119
>gb|KFK23993.1| hypothetical protein AALP_AAs48021U000700 [Arabis alpina]
Length = 1555
Score = 87.0 bits (214), Expect = 4e-15
Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Frame = +2
Query: 5 CIDY*ALNEITIKEKNSHTRDR*IIG*T*WRCIL--L*VRPSHQVSPHPSQGAPCFKKAA 178
C+DY ALN++T+ + ++ I L +R + ++ P K A
Sbjct: 659 CVDYRALNKVTVGDSYPIPMIDQLLDELHGSVIFSKLDLRAGYHQIRVKAEDVP---KTA 715
Query: 179 F*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVYIRTRNDH 352
F HDGHY FLVMPFGLTNAP TFQSLMN++FR +L + VLVFFD+IL+Y +T +H
Sbjct: 716 FRTHDGHYE-FLVMPFGLTNAPGTFQSLMNEVFRKFLRRFVLVFFDDILIYSKTEVEH 772
>gb|KFK23991.1| hypothetical protein AALP_AAs48021U000700 [Arabis alpina]
Length = 1473
Score = 87.0 bits (214), Expect = 4e-15
Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Frame = +2
Query: 5 CIDY*ALNEITIKEKNSHTRDR*IIG*T*WRCIL--L*VRPSHQVSPHPSQGAPCFKKAA 178
C+DY ALN++T+ + ++ I L +R + ++ P K A
Sbjct: 577 CVDYRALNKVTVGDSYPIPMIDQLLDELHGSVIFSKLDLRAGYHQIRVKAEDVP---KTA 633
Query: 179 F*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVYIRTRNDH 352
F HDGHY FLVMPFGLTNAP TFQSLMN++FR +L + VLVFFD+IL+Y +T +H
Sbjct: 634 FRTHDGHYE-FLVMPFGLTNAPGTFQSLMNEVFRKFLRRFVLVFFDDILIYSKTEVEH 690
>ref|XP_009150826.1| PREDICTED: uncharacterized protein LOC103874163 [Brassica rapa]
Length = 637
Score = 86.3 bits (212), Expect = 7e-15
Identities = 53/118 (44%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Frame = +2
Query: 5 CIDY*ALNEITIKEKNSHTRDR*IIG*T*WRCIL--L*VRPSHQVSPHPSQGAPCFKKAA 178
C+DY ALN +T+ +K ++ I L +R + + P K A
Sbjct: 415 CVDYRALNRVTVADKFPIPMIDQLLDELHGAQIFSKLDLRSGYHQILVKKKDVP---KTA 471
Query: 179 F*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVYIRTRNDH 352
F HDGHY FLVMPFGL+NAP+TFQSLMN +FR +L K +LVFFD+ILVY +T +H
Sbjct: 472 FRTHDGHYE-FLVMPFGLSNAPATFQSLMNQVFRPFLRKFILVFFDDILVYRKTEEEH 528
>gb|ADF45984.1| reverse transcriptase, partial [Eleocharis mamillata subsp.
austriaca]
Length = 143
Score = 86.3 bits (212), Expect = 7e-15
Identities = 54/118 (45%), Positives = 71/118 (60%), Gaps = 1/118 (0%)
Frame = +2
Query: 2 LCIDY*ALNEITIKEKNSHTRDR*IIG*T*WRCILL*VRPSHQVSPHPSQGAPCFK-KAA 178
+C+DY LNE TIK K+ ++ + + H+ H + K K A
Sbjct: 2 MCVDYRKLNENTIKNKHPIPIIDDLLDEL--KGAKYFSKLDHRAGYHQIRMCEDDKFKTA 59
Query: 179 F*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVYIRTRNDH 352
F H+GHY F VMPFGLTNAP+TFQ LMN IF+++L + VLVFFD+ILVY +T NDH
Sbjct: 60 FQTHEGHYE-FNVMPFGLTNAPATFQGLMNSIFKLFLRRFVLVFFDDILVYSKTINDH 116
Score = 59.7 bits (143), Expect = 7e-07
Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 7/136 (5%)
Frame = +3
Query: 42 RKKTPIPVIDELLDELNGAAFFFKLDLRTRYHHIRVKERHVLKRLHSECMTVTTINSWSC 221
+ K PIP+ID+LLDEL GA +F KLD R YH IR+ E K T +
Sbjct: 15 KNKHPIPIIDDLLDELKGAKYFSKLDHRAGYHQIRMCEDDKFK---------TAFQTHEG 65
Query: 222 HSDLQ-MPLLLFRAS*MIF-LECTCVRLYLY-FLTIFW---YIYGLGMIT*P-HLWEVFG 380
H + MP L A L + +L+L F+ +F+ +Y + HL +V
Sbjct: 66 HYEFNVMPFGLTNAPATFQGLMNSIFKLFLRRFVLVFFDDILVYSKTINDHKAHLEQVLT 125
Query: 381 IL*ENHMFVKRSKCSF 428
+L NH+FVK SKC F
Sbjct: 126 LLQNNHLFVKESKCEF 141
>gb|ABB47037.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1347
Score = 83.2 bits (204), Expect = 6e-14
Identities = 57/120 (47%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
Frame = +2
Query: 5 CIDY*ALNEITIKEKNSHTRDR*IIG*T*WRCIL--L*VRPS-HQVSPHPSQGAPCFKKA 175
C++Y ALNE T+K+K ++ I L +R HQV HP K
Sbjct: 469 CVNYRALNERTVKDKYPIPVVDELLDELHGAAIFSKLDLRSGYHQVRMHPDD----IDKT 524
Query: 176 AF*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVYIRTRNDHL 355
AF HDG Y FLV+PFGLTNA +TFQSLMND+ R +L + VLVFFD+ILVY T HL
Sbjct: 525 AFRTHDGLYE-FLVIPFGLTNALATFQSLMNDVLRPFLRRFVLVFFDDILVYSPTWTSHL 583
Score = 57.8 bits (138), Expect = 3e-06
Identities = 48/141 (34%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Frame = +3
Query: 42 RKKTPIPVIDELLDELNGAAFFFKLDLRTRYHHIRVKERHVLK---RLHSEC-------- 188
+ K PIPV+DELLDEL+GAA F KLDLR+ YH +R+ + K R H
Sbjct: 481 KDKYPIPVVDELLDELHGAAIFSKLDLRSGYHQVRMHPDDIDKTAFRTHDGLYEFLVIPF 540
Query: 189 -MTVTTINSWSCHSDLQMPLLLFRAS*MIFLECTCVRLYLYFLTIFWYIYGLGMIT*PHL 365
+T S +D+ P L R ++F + + +Y T ++ HL
Sbjct: 541 GLTNALATFQSLMNDVLRPFL--RRFVLVFFD----DILVYSPTWTSHLQ--------HL 586
Query: 366 WEVFGIL*ENHMFVKRSKCSF 428
VF L +FVK +KCSF
Sbjct: 587 RTVFTALWAAQLFVKHTKCSF 607
>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
Length = 1631
Score = 83.2 bits (204), Expect = 6e-14
Identities = 52/120 (43%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Frame = +2
Query: 5 CIDY*ALNEITIKEKNSHTRDR*IIG*T*WRCIL--L*VRPS-HQVSPHPSQGAPCFKKA 175
C+DY ALN+ T+ +K ++ + L +R HQ+ P K
Sbjct: 744 CVDYRALNKETVPDKYPIPVIDELLDELHGATVFSKLDLRAGYHQILVRPEDT----HKT 799
Query: 176 AF*MHDGHYY*FLVMPFGLTNAPSTFQSLMNDIFRMYLCKVVLVFFDNILVYIRTRNDHL 355
AF H+GHY FLVMPFGLTNAP+TFQSLMN++FR +L + VLVF D+IL+Y R+ +H+
Sbjct: 800 AFRTHEGHYE-FLVMPFGLTNAPATFQSLMNEVFRPFLRRFVLVFLDDILIYSRSDEEHV 858