BLASTX nr result
ID: Cinnamomum23_contig00026913
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00026913
(703 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q0G9M7.2|RPOB_LIRTU RecName: Full=DNA-directed RNA polymerase... 439 e-121
ref|YP_740194.1| RNA polymerase beta subunit [Liriodendron tulip... 439 e-121
ref|YP_009093942.1| RNA polymerase beta subunit (chloroplast) [N... 437 e-120
ref|YP_004563859.1| RNA polymerase beta subunit [Nelumbo lutea] ... 437 e-120
ref|YP_009114861.1| RNA polymerase beta subunit [Thalictrum core... 435 e-119
gb|AIZ57525.1| RNA polymerase beta subunit (chloroplast) [Clemat... 435 e-119
sp|Q7YJX8.1|RPOB_CALFG RecName: Full=DNA-directed RNA polymerase... 435 e-119
ref|NP_862746.2| RNA polymerase beta subunit [Calycanthus florid... 435 e-119
ref|YP_007474528.1| RNA polymerase beta subunit (chloroplast) [M... 434 e-119
ref|YP_002836082.1| RNA polymerase beta subunit [Megaleranthis s... 434 e-119
gb|ADD31203.1| RNA polymerase beta subunit protein (chloroplast)... 433 e-119
ref|YP_009026873.1| RNA polymerase beta subunit (plastid) [Magno... 433 e-119
gb|AHE41625.1| RNA polymerase beta subunit protein, partial (chl... 433 e-119
ref|YP_007474362.1| RNA polymerase beta subunit (chloroplast) [M... 433 e-119
gb|AEX98243.1| RNA polymerase beta subunit (chloroplast) [Magnol... 433 e-119
ref|YP_006576107.1| RpoB (chloroplast) [Magnolia denudata] gi|34... 433 e-119
ref|YP_009048279.1| DNA-directed RNA polymerase beta chain (chlo... 433 e-119
ref|YP_740642.1| RNA polymerase beta subunit [Nandina domestica]... 432 e-119
ref|YP_004769706.1| RNA polymerase beta subunit [Magnolia kwangs... 432 e-118
ref|YP_008963683.1| RNA polymerase beta subunit (chloroplast) [L... 431 e-118
>sp|Q0G9M7.2|RPOB_LIRTU RecName: Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
(chloroplast) [Liriodendron tulipifera]
Length = 1070
Score = 439 bits (1130), Expect = e-121
Identities = 219/230 (95%), Positives = 223/230 (96%)
Frame = -1
Query: 691 SGNSLALNRGIQEEQVVPAGYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 512
+GNSLALN GIQEEQVVPA YRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481 AGNSLALNWGIQEEQVVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 540
Query: 511 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 332
RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKI+YTDTDKIVLSGN
Sbjct: 541 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIVYTDTDKIVLSGN 600
Query: 331 GDTISIPLVMYQRSSKNTCMHQKPQAPRGKCIKKGQILADGAATVGGELTLGKNVLVAYM 152
GDTISIPLVMYQRS+KNTCMHQKPQ RGKCIKKGQILADGAATVGGEL LGKNVLVAYM
Sbjct: 601 GDTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
Query: 151 SWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIP 2
WEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITN+IP
Sbjct: 661 PWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNEIP 710
>ref|YP_740194.1| RNA polymerase beta subunit [Liriodendron tulipifera]
gi|113200986|gb|ABI32501.1| RNA polymerase beta subunit
[Liriodendron tulipifera]
Length = 1079
Score = 439 bits (1130), Expect = e-121
Identities = 219/230 (95%), Positives = 223/230 (96%)
Frame = -1
Query: 691 SGNSLALNRGIQEEQVVPAGYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 512
+GNSLALN GIQEEQVVPA YRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 490 AGNSLALNWGIQEEQVVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 549
Query: 511 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 332
RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKI+YTDTDKIVLSGN
Sbjct: 550 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIVYTDTDKIVLSGN 609
Query: 331 GDTISIPLVMYQRSSKNTCMHQKPQAPRGKCIKKGQILADGAATVGGELTLGKNVLVAYM 152
GDTISIPLVMYQRS+KNTCMHQKPQ RGKCIKKGQILADGAATVGGEL LGKNVLVAYM
Sbjct: 610 GDTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADGAATVGGELALGKNVLVAYM 669
Query: 151 SWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIP 2
WEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITN+IP
Sbjct: 670 PWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNEIP 719
>ref|YP_009093942.1| RNA polymerase beta subunit (chloroplast) [Nelumbo nucifera]
gi|224474214|gb|ACN49400.1| RNA polymerase beta subunit
(chloroplast) [Nelumbo nucifera]
gi|290489618|gb|ADD31193.1| RNA polymerase beta subunit
protein (chloroplast) [Nelumbo nucifera]
gi|383286789|gb|AFH01439.1| RNA polymerase beta subunit
(chloroplast) [Nelumbo nucifera]
gi|519666904|gb|AGO98516.1| RNA polymerase beta subunit
(chloroplast) [Nelumbo nucifera]
gi|725824035|gb|AIY33814.1| RNA polymerase beta subunit
(chloroplast) [Nelumbo nucifera]
Length = 1070
Score = 437 bits (1124), Expect = e-120
Identities = 215/230 (93%), Positives = 223/230 (96%)
Frame = -1
Query: 691 SGNSLALNRGIQEEQVVPAGYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 512
+GNSLALN+ IQEEQVVPA YRQEFLTIAWEQ+HLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481 AGNSLALNQSIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540
Query: 511 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 332
RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKI+LSGN
Sbjct: 541 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIILSGN 600
Query: 331 GDTISIPLVMYQRSSKNTCMHQKPQAPRGKCIKKGQILADGAATVGGELTLGKNVLVAYM 152
GDT+SIPL+MYQRS+KNTCMHQKPQ RGKCIKKGQILADGAATVGGEL LGKNVLVAYM
Sbjct: 601 GDTLSIPLIMYQRSNKNTCMHQKPQVRRGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
Query: 151 SWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIP 2
WEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITN+IP
Sbjct: 661 PWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNEIP 710
>ref|YP_004563859.1| RNA polymerase beta subunit [Nelumbo lutea]
gi|224474126|gb|ACN49315.1| RNA polymerase beta subunit
[Nelumbo lutea] gi|383286884|gb|AFH01533.1| RNA
polymerase beta subunit (chloroplast) [Nelumbo lutea]
Length = 1070
Score = 437 bits (1124), Expect = e-120
Identities = 215/230 (93%), Positives = 223/230 (96%)
Frame = -1
Query: 691 SGNSLALNRGIQEEQVVPAGYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 512
+GNSLALN+ IQEEQVVPA YRQEFLTIAWEQ+HLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481 AGNSLALNQSIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540
Query: 511 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 332
RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKI+LSGN
Sbjct: 541 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIILSGN 600
Query: 331 GDTISIPLVMYQRSSKNTCMHQKPQAPRGKCIKKGQILADGAATVGGELTLGKNVLVAYM 152
GDT+SIPL+MYQRS+KNTCMHQKPQ RGKCIKKGQILADGAATVGGEL LGKNVLVAYM
Sbjct: 601 GDTLSIPLIMYQRSNKNTCMHQKPQVRRGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
Query: 151 SWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIP 2
WEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITN+IP
Sbjct: 661 PWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNEIP 710
>ref|YP_009114861.1| RNA polymerase beta subunit [Thalictrum coreanum]
gi|721136297|gb|AIX03508.1| RNA polymerase beta subunit
[Thalictrum coreanum]
Length = 1070
Score = 435 bits (1118), Expect = e-119
Identities = 215/230 (93%), Positives = 224/230 (97%)
Frame = -1
Query: 691 SGNSLALNRGIQEEQVVPAGYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 512
+GNSLALN+GIQEEQV+PA YRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481 AGNSLALNQGIQEEQVIPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 540
Query: 511 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 332
RALMSSNMQRQAVPLSRSEKCIVGTGLE QAALDSGVSAIAEHEGKIIYTDTDKI+LSGN
Sbjct: 541 RALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVSAIAEHEGKIIYTDTDKIMLSGN 600
Query: 331 GDTISIPLVMYQRSSKNTCMHQKPQAPRGKCIKKGQILADGAATVGGELTLGKNVLVAYM 152
GDT+SIPLVMYQRS+KNTCMHQK + PRGKCIKKGQILADGAATVGGEL LGKNVLVAYM
Sbjct: 601 GDTLSIPLVMYQRSNKNTCMHQKSRVPRGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
Query: 151 SWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIP 2
WEGYNFEDAVLISERLVYGDIYTSFHIRKYEI+THVTSQGPERITN+IP
Sbjct: 661 PWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIKTHVTSQGPERITNEIP 710
>gb|AIZ57525.1| RNA polymerase beta subunit (chloroplast) [Clematis fusca var.
coreana]
Length = 1082
Score = 435 bits (1118), Expect = e-119
Identities = 216/229 (94%), Positives = 222/229 (96%)
Frame = -1
Query: 688 GNSLALNRGIQEEQVVPAGYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDANR 509
GNSLALN+GIQEEQVVPA YRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDANR
Sbjct: 494 GNSLALNQGIQEEQVVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDANR 553
Query: 508 ALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIVLSGNG 329
ALMSSNMQRQAVPLSRSEKCIVGTGLE QAALDSGVSAIAEHEGKIIYTDTDKI+LSGNG
Sbjct: 554 ALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVSAIAEHEGKIIYTDTDKIMLSGNG 613
Query: 328 DTISIPLVMYQRSSKNTCMHQKPQAPRGKCIKKGQILADGAATVGGELTLGKNVLVAYMS 149
T+ IPLVMYQRS+KNTCMHQKP+ PRGKCIKKGQILADGAATVGGEL LGKNVLVAYM
Sbjct: 614 GTLRIPLVMYQRSNKNTCMHQKPRVPRGKCIKKGQILADGAATVGGELALGKNVLVAYMP 673
Query: 148 WEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIP 2
WEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITN+IP
Sbjct: 674 WEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNEIP 722
>sp|Q7YJX8.1|RPOB_CALFG RecName: Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
(chloroplast) [Calycanthus floridus var. glaucus]
gi|32399371|emb|CAD28713.1| RNA polymerase beta subunit
[Calycanthus floridus var. glaucus]
Length = 1060
Score = 435 bits (1118), Expect = e-119
Identities = 217/230 (94%), Positives = 223/230 (96%)
Frame = -1
Query: 691 SGNSLALNRGIQEEQVVPAGYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 512
+GNSLALNRGIQEEQVVPA YRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 471 AGNSLALNRGIQEEQVVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 530
Query: 511 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 332
RALMSSNMQRQAVPLSRSEKCIVGTGLE QAALDSGVSAIAEHEGKIIYTDTDKIVLSGN
Sbjct: 531 RALMSSNMQRQAVPLSRSEKCIVGTGLEGQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 590
Query: 331 GDTISIPLVMYQRSSKNTCMHQKPQAPRGKCIKKGQILADGAATVGGELTLGKNVLVAYM 152
DTISIPLVMYQRS+KNTCMHQKP+ PRGKCIKKGQILADGAATVGGEL LGKNVLVA+M
Sbjct: 591 RDTISIPLVMYQRSNKNTCMHQKPRVPRGKCIKKGQILADGAATVGGELALGKNVLVAHM 650
Query: 151 SWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIP 2
WEGYN EDAVLISERL+YGDIYTSFHIRKYEIQTHVTSQGPERITN+IP
Sbjct: 651 PWEGYNSEDAVLISERLIYGDIYTSFHIRKYEIQTHVTSQGPERITNEIP 700
>ref|NP_862746.2| RNA polymerase beta subunit [Calycanthus floridus var. glaucus]
Length = 1069
Score = 435 bits (1118), Expect = e-119
Identities = 217/230 (94%), Positives = 223/230 (96%)
Frame = -1
Query: 691 SGNSLALNRGIQEEQVVPAGYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 512
+GNSLALNRGIQEEQVVPA YRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 480 AGNSLALNRGIQEEQVVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 539
Query: 511 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 332
RALMSSNMQRQAVPLSRSEKCIVGTGLE QAALDSGVSAIAEHEGKIIYTDTDKIVLSGN
Sbjct: 540 RALMSSNMQRQAVPLSRSEKCIVGTGLEGQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 599
Query: 331 GDTISIPLVMYQRSSKNTCMHQKPQAPRGKCIKKGQILADGAATVGGELTLGKNVLVAYM 152
DTISIPLVMYQRS+KNTCMHQKP+ PRGKCIKKGQILADGAATVGGEL LGKNVLVA+M
Sbjct: 600 RDTISIPLVMYQRSNKNTCMHQKPRVPRGKCIKKGQILADGAATVGGELALGKNVLVAHM 659
Query: 151 SWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIP 2
WEGYN EDAVLISERL+YGDIYTSFHIRKYEIQTHVTSQGPERITN+IP
Sbjct: 660 PWEGYNSEDAVLISERLIYGDIYTSFHIRKYEIQTHVTSQGPERITNEIP 709
>ref|YP_007474528.1| RNA polymerase beta subunit (chloroplast) [Magnolia grandiflora]
gi|372862835|gb|AEX98911.1| RNA polymerase beta subunit
(chloroplast) [Magnolia grandiflora]
gi|372863005|gb|AEX99079.1| RNA polymerase beta subunit
(chloroplast) [Magnolia grandiflora]
Length = 1079
Score = 434 bits (1115), Expect = e-119
Identities = 216/230 (93%), Positives = 222/230 (96%)
Frame = -1
Query: 691 SGNSLALNRGIQEEQVVPAGYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 512
+GNSLALN G+QEEQVVPA YRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 490 AGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 549
Query: 511 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 332
RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKI+ TDTDKIVLSGN
Sbjct: 550 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIVSTDTDKIVLSGN 609
Query: 331 GDTISIPLVMYQRSSKNTCMHQKPQAPRGKCIKKGQILADGAATVGGELTLGKNVLVAYM 152
G+TISIPLVMYQRS+KNTCMHQKPQ RGKCIKKGQILADGAATVGGEL LGKNVLVAYM
Sbjct: 610 GNTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADGAATVGGELALGKNVLVAYM 669
Query: 151 SWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIP 2
WEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITN+IP
Sbjct: 670 PWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNEIP 719
>ref|YP_002836082.1| RNA polymerase beta subunit [Megaleranthis saniculifolia]
gi|226933874|gb|ACO92007.1| RNA polymerase beta subunit
[Megaleranthis saniculifolia]
Length = 1071
Score = 434 bits (1115), Expect = e-119
Identities = 214/230 (93%), Positives = 224/230 (97%)
Frame = -1
Query: 691 SGNSLALNRGIQEEQVVPAGYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 512
+GNSLALN+GIQEEQVVPA YRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 482 AGNSLALNQGIQEEQVVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 541
Query: 511 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 332
RALMSSNMQRQAVPLSRSEKCIVGTGLE QAALDSGVSAIAEHEGKI+YTDTDKI+LSGN
Sbjct: 542 RALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVSAIAEHEGKIVYTDTDKIMLSGN 601
Query: 331 GDTISIPLVMYQRSSKNTCMHQKPQAPRGKCIKKGQILADGAATVGGELTLGKNVLVAYM 152
GDT+SIPLVMYQRS+KNTCMHQK + PRGKCIKKGQILADGAATVGGEL LGKNV+VAYM
Sbjct: 602 GDTLSIPLVMYQRSNKNTCMHQKTRVPRGKCIKKGQILADGAATVGGELALGKNVVVAYM 661
Query: 151 SWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIP 2
WEGYNFEDAVLISERLVYGDIYTSFHIRKYEI+THVTSQGPERITN+IP
Sbjct: 662 PWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIKTHVTSQGPERITNEIP 711
>gb|ADD31203.1| RNA polymerase beta subunit protein (chloroplast) [Gunnera manicata]
Length = 1070
Score = 433 bits (1114), Expect = e-119
Identities = 214/230 (93%), Positives = 223/230 (96%)
Frame = -1
Query: 691 SGNSLALNRGIQEEQVVPAGYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 512
+GNSLALN+GIQEEQVVPA YRQEFLTIAWEQ+HLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481 AGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540
Query: 511 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 332
RALMSSNMQRQAVPLSRSEKCIVGTGLE QAALDSGVSAIAEHEGKIIYTDTDKI+LSGN
Sbjct: 541 RALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVSAIAEHEGKIIYTDTDKIILSGN 600
Query: 331 GDTISIPLVMYQRSSKNTCMHQKPQAPRGKCIKKGQILADGAATVGGELTLGKNVLVAYM 152
GDT+SIPLVMY+RS+KNTCMHQKPQ RG CIKKGQILADGAATVGGELTLGKN+LVAYM
Sbjct: 601 GDTLSIPLVMYERSNKNTCMHQKPQVQRGNCIKKGQILADGAATVGGELTLGKNLLVAYM 660
Query: 151 SWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIP 2
WEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITN+IP
Sbjct: 661 PWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNEIP 710
>ref|YP_009026873.1| RNA polymerase beta subunit (plastid) [Magnolia tripetala]
gi|608608396|gb|AHW51950.1| RNA polymerase beta subunit
[Magnolia tripetala]
Length = 1079
Score = 433 bits (1114), Expect = e-119
Identities = 215/230 (93%), Positives = 222/230 (96%)
Frame = -1
Query: 691 SGNSLALNRGIQEEQVVPAGYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 512
+GNSLALN G+QEEQVVPA YRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 490 AGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 549
Query: 511 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 332
RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKI+ TDTDKIVLSGN
Sbjct: 550 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIVSTDTDKIVLSGN 609
Query: 331 GDTISIPLVMYQRSSKNTCMHQKPQAPRGKCIKKGQILADGAATVGGELTLGKNVLVAYM 152
G+TISIPLVMYQRS+KNTCMHQKPQ RGKC+KKGQILADGAATVGGEL LGKNVLVAYM
Sbjct: 610 GNTISIPLVMYQRSNKNTCMHQKPQVRRGKCVKKGQILADGAATVGGELALGKNVLVAYM 669
Query: 151 SWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIP 2
WEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITN+IP
Sbjct: 670 PWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNEIP 719
>gb|AHE41625.1| RNA polymerase beta subunit protein, partial (chloroplast) [Gunnera
manicata]
Length = 794
Score = 433 bits (1114), Expect = e-119
Identities = 214/230 (93%), Positives = 223/230 (96%)
Frame = -1
Query: 691 SGNSLALNRGIQEEQVVPAGYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 512
+GNSLALN+GIQEEQVVPA YRQEFLTIAWEQ+HLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 465 AGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 524
Query: 511 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 332
RALMSSNMQRQAVPLSRSEKCIVGTGLE QAALDSGVSAIAEHEGKIIYTDTDKI+LSGN
Sbjct: 525 RALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVSAIAEHEGKIIYTDTDKIILSGN 584
Query: 331 GDTISIPLVMYQRSSKNTCMHQKPQAPRGKCIKKGQILADGAATVGGELTLGKNVLVAYM 152
GDT+SIPLVMY+RS+KNTCMHQKPQ RG CIKKGQILADGAATVGGELTLGKN+LVAYM
Sbjct: 585 GDTLSIPLVMYERSNKNTCMHQKPQVQRGNCIKKGQILADGAATVGGELTLGKNLLVAYM 644
Query: 151 SWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIP 2
WEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITN+IP
Sbjct: 645 PWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNEIP 694
>ref|YP_007474362.1| RNA polymerase beta subunit (chloroplast) [Magnolia officinalis]
gi|452848763|ref|YP_007474444.1| RNA polymerase beta
subunit (chloroplast) [Magnolia officinalis subsp.
biloba] gi|372862413|gb|AEX98494.1| RNA polymerase beta
subunit (chloroplast) [Magnolia officinalis]
gi|372862496|gb|AEX98576.1| RNA polymerase beta subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862581|gb|AEX98660.1| RNA polymerase beta subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862666|gb|AEX98744.1| RNA polymerase beta subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
Length = 1079
Score = 433 bits (1114), Expect = e-119
Identities = 215/230 (93%), Positives = 222/230 (96%)
Frame = -1
Query: 691 SGNSLALNRGIQEEQVVPAGYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 512
+GNSLALN G+QEEQVVPA YRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 490 AGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 549
Query: 511 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 332
RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKI+ TDTDKIVLSGN
Sbjct: 550 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIVSTDTDKIVLSGN 609
Query: 331 GDTISIPLVMYQRSSKNTCMHQKPQAPRGKCIKKGQILADGAATVGGELTLGKNVLVAYM 152
G+TISIPLVMYQRS+KNTCMHQKPQ RGKC+KKGQILADGAATVGGEL LGKNVLVAYM
Sbjct: 610 GNTISIPLVMYQRSNKNTCMHQKPQVRRGKCVKKGQILADGAATVGGELALGKNVLVAYM 669
Query: 151 SWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIP 2
WEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITN+IP
Sbjct: 670 PWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNEIP 719
>gb|AEX98243.1| RNA polymerase beta subunit (chloroplast) [Magnolia liliiflora]
Length = 1079
Score = 433 bits (1114), Expect = e-119
Identities = 215/230 (93%), Positives = 222/230 (96%)
Frame = -1
Query: 691 SGNSLALNRGIQEEQVVPAGYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 512
+GNSLALN G+QEEQVVPA YRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 490 AGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 549
Query: 511 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 332
RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKI+ TDTDKI+LSGN
Sbjct: 550 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIVSTDTDKIILSGN 609
Query: 331 GDTISIPLVMYQRSSKNTCMHQKPQAPRGKCIKKGQILADGAATVGGELTLGKNVLVAYM 152
G+TISIPLVMYQRS+KNTCMHQKPQ RGKCIKKGQILADGAATVGGEL LGKNVLVAYM
Sbjct: 610 GNTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADGAATVGGELALGKNVLVAYM 669
Query: 151 SWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIP 2
WEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITN+IP
Sbjct: 670 PWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNEIP 719
>ref|YP_006576107.1| RpoB (chloroplast) [Magnolia denudata] gi|343887531|gb|AEM65210.1|
RpoB [Magnolia denudata] gi|372862243|gb|AEX98326.1| RNA
polymerase beta subunit (chloroplast) [Magnolia denudata]
Length = 1079
Score = 433 bits (1114), Expect = e-119
Identities = 215/230 (93%), Positives = 222/230 (96%)
Frame = -1
Query: 691 SGNSLALNRGIQEEQVVPAGYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 512
+GNSLALN G+QEEQVVPA YRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 490 AGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 549
Query: 511 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 332
RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKI+ TDTDKI+LSGN
Sbjct: 550 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIVSTDTDKIILSGN 609
Query: 331 GDTISIPLVMYQRSSKNTCMHQKPQAPRGKCIKKGQILADGAATVGGELTLGKNVLVAYM 152
G+TISIPLVMYQRS+KNTCMHQKPQ RGKCIKKGQILADGAATVGGEL LGKNVLVAYM
Sbjct: 610 GNTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADGAATVGGELALGKNVLVAYM 669
Query: 151 SWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIP 2
WEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITN+IP
Sbjct: 670 PWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNEIP 719
>ref|YP_009048279.1| DNA-directed RNA polymerase beta chain (chloroplast) [Magnolia
yunnanensis] gi|573015506|gb|AHF72084.1| DNA-directed RNA
polymerase beta chain (chloroplast) [Magnolia
yunnanensis]
Length = 1070
Score = 433 bits (1113), Expect = e-119
Identities = 215/230 (93%), Positives = 222/230 (96%)
Frame = -1
Query: 691 SGNSLALNRGIQEEQVVPAGYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 512
+GNSLALN G+QEEQVVPA YRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481 AGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 540
Query: 511 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 332
RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKI+ TDTDKIVLSGN
Sbjct: 541 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIVSTDTDKIVLSGN 600
Query: 331 GDTISIPLVMYQRSSKNTCMHQKPQAPRGKCIKKGQILADGAATVGGELTLGKNVLVAYM 152
G+TISIPLVMYQRS+KNTCMHQKPQ RGKCIKKGQILADGAATVGGEL LGKNVLVAYM
Sbjct: 601 GNTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
Query: 151 SWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIP 2
WEGYN EDAVLISER+VYGDIYTSFHIRKYEIQTHVTSQGPERITN+IP
Sbjct: 661 PWEGYNSEDAVLISERIVYGDIYTSFHIRKYEIQTHVTSQGPERITNEIP 710
>ref|YP_740642.1| RNA polymerase beta subunit [Nandina domestica]
gi|122165969|sp|Q09FW9.1|RPOB_NANDO RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
(chloroplast) [Nandina domestica]
gi|114054462|gb|ABI49855.1| RNA polymerase beta subunit
[Nandina domestica]
Length = 1070
Score = 432 bits (1111), Expect = e-119
Identities = 215/230 (93%), Positives = 221/230 (96%)
Frame = -1
Query: 691 SGNSLALNRGIQEEQVVPAGYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 512
+GNSLALN GIQEEQVVPA YRQEFLTIAWEQI LRSIFPFQYFS+GASLIPFIEHNDAN
Sbjct: 481 AGNSLALNHGIQEEQVVPARYRQEFLTIAWEQIQLRSIFPFQYFSVGASLIPFIEHNDAN 540
Query: 511 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 332
RALMSSNMQRQAVPLSRSEKCIVGTGLE QAALDSGVSAIAEHEGKIIYTDTDKI+LSGN
Sbjct: 541 RALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVSAIAEHEGKIIYTDTDKIILSGN 600
Query: 331 GDTISIPLVMYQRSSKNTCMHQKPQAPRGKCIKKGQILADGAATVGGELTLGKNVLVAYM 152
G T+SIPLVMYQRS+KNTCMHQKPQ RGKCIKKGQILADGAATVGGEL LGKNVLVAYM
Sbjct: 601 GATLSIPLVMYQRSNKNTCMHQKPQVSRGKCIKKGQILADGAATVGGELALGKNVLVAYM 660
Query: 151 SWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIP 2
WEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITN+IP
Sbjct: 661 PWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNEIP 710
>ref|YP_004769706.1| RNA polymerase beta subunit [Magnolia kwangsiensis]
gi|302424172|gb|ADL39048.1| RNA polymerase beta subunit
[Magnolia kwangsiensis]
Length = 1079
Score = 432 bits (1110), Expect = e-118
Identities = 215/230 (93%), Positives = 221/230 (96%)
Frame = -1
Query: 691 SGNSLALNRGIQEEQVVPAGYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 512
+GNSLALN G+QEEQVVPA YRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 490 AGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 549
Query: 511 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 332
RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKI+ DTDKIVLSGN
Sbjct: 550 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIVSADTDKIVLSGN 609
Query: 331 GDTISIPLVMYQRSSKNTCMHQKPQAPRGKCIKKGQILADGAATVGGELTLGKNVLVAYM 152
G+TISIPLVMYQRS+KNTCMHQKPQ RGKCIKKGQILADGAATVGGEL LGKNVLVAYM
Sbjct: 610 GNTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADGAATVGGELALGKNVLVAYM 669
Query: 151 SWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIP 2
WEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITN+IP
Sbjct: 670 PWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNEIP 719
>ref|YP_008963683.1| RNA polymerase beta subunit (chloroplast) [Liquidambar formosana]
gi|491650363|gb|AGL13423.1| RNA polymerase beta subunit
(chloroplast) [Liquidambar formosana]
Length = 1070
Score = 431 bits (1109), Expect = e-118
Identities = 211/230 (91%), Positives = 221/230 (96%)
Frame = -1
Query: 691 SGNSLALNRGIQEEQVVPAGYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDAN 512
+GNSLALN+GIQEEQVVPA YRQEFLTIAWEQ+HLRSIFPFQYFSIGASLIPFIEHNDAN
Sbjct: 481 AGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN 540
Query: 511 RALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIIYTDTDKIVLSGN 332
RALMSSNMQRQAVPLSRSEKCIVGTGLE QAALDSG+ +AEHEGKI+YTDTDKI+LSGN
Sbjct: 541 RALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGIPVLAEHEGKIVYTDTDKIILSGN 600
Query: 331 GDTISIPLVMYQRSSKNTCMHQKPQAPRGKCIKKGQILADGAATVGGELTLGKNVLVAYM 152
GDT+SIPLVMYQRS+KNTCMHQKPQ R KCIKKGQILADGAATVGGEL LGKNVLVAYM
Sbjct: 601 GDTLSIPLVMYQRSNKNTCMHQKPQVQRSKCIKKGQILADGAATVGGELALGKNVLVAYM 660
Query: 151 SWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNKIP 2
WEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITN+IP
Sbjct: 661 PWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNEIP 710