BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00026057
         (541 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009112926.1| PREDICTED: putative ribonuclease H protein A...   100   4e-19
ref|XP_009140196.1| PREDICTED: putative ribonuclease H protein A...    99   1e-18
ref|XP_010467312.1| PREDICTED: uncharacterized protein LOC104747...    98   2e-18
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    93   8e-17
ref|XP_010422600.1| PREDICTED: uncharacterized protein LOC104707...    92   1e-16
ref|XP_009119506.1| PREDICTED: uncharacterized protein LOC103844...    92   1e-16
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                92   2e-16
ref|XP_008460525.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    91   2e-16
ref|XP_009108094.1| PREDICTED: putative ribonuclease H protein A...    90   5e-16
ref|XP_009112956.1| PREDICTED: putative ribonuclease H protein A...    90   5e-16
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali...    90   7e-16
ref|XP_009119497.1| PREDICTED: uncharacterized protein LOC103844...    89   9e-16
gb|AID60144.1| hypothetical protein [Brassica napus]                   89   9e-16
ref|XP_009121373.1| PREDICTED: putative ribonuclease H protein A...    88   3e-15
ref|XP_009144139.1| PREDICTED: putative ribonuclease H protein A...    87   3e-15
ref|XP_009147143.1| PREDICTED: uncharacterized protein LOC103870...    87   4e-15
ref|XP_010026295.1| PREDICTED: uncharacterized protein LOC104416...    86   7e-15
ref|XP_009144587.1| PREDICTED: putative ribonuclease H protein A...    86   7e-15
gb|AAC24057.1| Contains similarity to reverse transcriptase-like...    86   7e-15
ref|XP_010549577.1| PREDICTED: uncharacterized protein LOC104820...    86   1e-14

>ref|XP_009112926.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 486

 Score =  100 bits (249), Expect = 4e-19
 Identities = 61/178 (34%), Positives = 88/178 (49%), Gaps = 3/178 (1%)
 Frame = +1

Query: 13  SWGWKSLLRVRTLANSHVKWLVGNGHTIKFWTDPWLNGGRLKDSYGDRAIYDMGLGDAVT 192
           SW W+ +L++R +A    K  V NG T  FW D W   G L D  G R   DMG+G   T
Sbjct: 190 SWMWRKILKIRNIARQFCKVDVKNGATTSFWYDHWSPMGCLMDLIGTRGQIDMGIGRYDT 249

Query: 193 IRQFIHEGRRRFPATRSRSLMEIFQIAPNEVEPWSEFEDEVVWTLEED---GKFTLKSAY 363
           +   + + RRR    RS  L+ I Q   N V   S+  DE++W  + D    KF  +  +
Sbjct: 250 VLTALTKRRRR--NHRSEVLLSIEQSLRNLVP--SDDADEILWKGKNDVYKPKFITRDTW 305

Query: 364 KRVCNLTDQDITWPSLIWFKGCIKKHSLCSWMFLRRRLKTKEFLLQRNVQCDSLCVLC 537
             + + T + ++W   +WF     K   C+W+ LR RL T + ++  NV  D  CVLC
Sbjct: 306 NHIRSTTSK-VSWHKALWFNQATPKFRFCTWLALRNRLTTGDRMVAWNVGIDGSCVLC 362


>ref|XP_009140196.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 384

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 3/160 (1%)
 Frame = +1

Query: 13  SWGWKSLLRVRTLANSHVKWLVGNGHTIKFWTDPWLNGGRLKDSYGDRAIYDMGLGDAVT 192
           SW W+ LLR+R +  S V+W +G+GHT++FWTD W   GRL D  G+     MG+G    
Sbjct: 85  SWVWRKLLRIRNIVKSFVRWDIGDGHTVRFWTDLWHPSGRLIDIAGESGTQRMGIGREKK 144

Query: 193 IRQFIHEGRRRFPATRSRSLMEIFQIAPNEVEPWSEFEDEVVWTLEED---GKFTLKSAY 363
           I +   +G  RF   R + L  + +         S+ +D ++W   +D    KF+    +
Sbjct: 145 ISELYVDGEWRFRRCRDQHLQSMIRDVIGHPIMLSQRQDTMLWRSGDDEFGDKFSASETW 204

Query: 364 KRVCNLTDQDITWPSLIWFKGCIKKHSLCSWMFLRRRLKT 483
            ++    ++ + W  ++WF   + +++  +W+ +R RL T
Sbjct: 205 HQIRRPRNR-VLWSKIVWFSQGVPRYAFITWLAIRDRLST 243


>ref|XP_010467312.1| PREDICTED: uncharacterized protein LOC104747378 [Camelina sativa]
          Length = 1258

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 3/178 (1%)
 Frame = +1

Query: 13   SWGWKSLLRVRTLANSHVKWLVGNGHTIKFWTDPWLNGGRLKDSYGDRAIYDMGLGDAVT 192
            SW W+ +L+ R LA    +  V NG    FW D W   GRL D  GDR I DMG+ +++T
Sbjct: 1048 SWMWRKILKYRGLAAQFCRKAVNNGSGTSFWYDNWSTMGRLVDVAGDRGIIDMGISNSMT 1107

Query: 193  IRQFIHEGRRRFPATRSRSLMEIFQIAPNEVEPWSEFEDEVVWTLEED---GKFTLKSAY 363
            + +      RR       +LME       + +  S  E+E +W  + D    +F+ K  +
Sbjct: 1108 VAEAWSRCYRRTYRLHYYTLME--AELSQKYQYRSSMENEALWKGKNDKYYPRFSTKDTW 1165

Query: 364  KRVCNLTDQDITWPSLIWFKGCIKKHSLCSWMFLRRRLKTKEFLLQRNVQCDSLCVLC 537
             +V   T  +++W   +WF   I K S C+W+ +R +L T + + Q +     +CVLC
Sbjct: 1166 NQV-RTTAAEVSWYDCVWFSHSISKFSFCTWLAVRNKLSTGDRMAQWSSGDTGVCVLC 1222


>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 92.8 bits (229), Expect = 8e-17
 Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 6/181 (3%)
 Frame = +1

Query: 13  SWGWKSLLRVRTLANSHVKWLVGNGHTIKFWTDPWLNGGRLKDSYGDRAIYDMGLGDAVT 192
           SW W+ +L+ R +A +  K  + NG    FW D W + GRL DS GDR   D+G+    T
Sbjct: 176 SWMWRKILKFRDIARTLCKVEINNGARTSFWYDDWSDLGRLIDSAGDRGAIDLGINKHAT 235

Query: 193 IRQFIHEGRRRFPATRSRSLMEIFQIAPNEVEPW---SEFEDEVVWTLEED---GKFTLK 354
           + +     RRR   T   + +E        +  W   ++ ED  +W  +E+     F+ K
Sbjct: 236 VVEAWGNRRRRRHRTNFLNRVE-----ERLILSWNSRNQAEDRALWKGKENRFRSIFSTK 290

Query: 355 SAYKRVCNLTDQDITWPSLIWFKGCIKKHSLCSWMFLRRRLKTKEFLLQRNVQCDSLCVL 534
             +  +  ++++ + W   +WF   I KH+ C W+ +  RL T + +   N+  D+ C+L
Sbjct: 291 DTWNHIRTVSNK-VAWYKGVWFAQAIPKHAFCMWLAVHNRLSTGDRMTLWNMGVDATCIL 349

Query: 535 C 537
           C
Sbjct: 350 C 350


>ref|XP_010422600.1| PREDICTED: uncharacterized protein LOC104707859 [Camelina sativa]
          Length = 1246

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
 Frame = +1

Query: 13  SWGWKSLLRVRTLANSHVKWLVGNGHTIKFWTDPWLNGGRLKDSYGDRAIYDMGLGDAVT 192
           SW WK L ++R LA   +   +G+G T  FW D W   G L D  GD      GL   V 
Sbjct: 314 SWIWKCLCKLRPLARPFIVCEIGSGKTCSFWNDNWTGLGPLVDITGDLGPSRTGLPKDVV 373

Query: 193 IRQFIHEGRRRFPATRSRS----LMEIFQIAPNEVE-PWSEFEDEVVWTLEEDGKFTLKS 357
           +R+ +  G     A+RSR+    L++     P+ V   ++  +D  +W + +     + S
Sbjct: 374 VREALRNGHWWISASRSRNPIVQLVKACLPLPSIVNAQFNAHDDCFLWKVGDSQPSNVFS 433

Query: 358 AYKRVCNL--TDQDITWPSLIWFKGCIKKHSLCSWMFLRRRLKTKEFLLQRNVQCDSLCV 531
             K    L  T Q + W   +WFKG I KH+  SW+  R RL T++ L+   +Q  S C+
Sbjct: 434 TAKTWNYLYPTGQRVEWFKSVWFKGRIPKHAFISWLNSRHRLLTRDRLISWGLQVPSTCL 493

Query: 532 LC 537
           LC
Sbjct: 494 LC 495


>ref|XP_009119506.1| PREDICTED: uncharacterized protein LOC103844473 [Brassica rapa]
          Length = 1703

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 3/178 (1%)
 Frame = +1

Query: 13   SWGWKSLLRVRTLANSHVKWLVGNGHTIKFWTDPWLNGGRLKDSYGDRAIYDMGLGDAVT 192
            SW W+ +L++R LA  +++  V NG    FW D W   GRLK+  GDR    +G+ +   
Sbjct: 1401 SWMWRKILKIRDLAKPYIRMEVHNGKNTSFWYDSWSQLGRLKEIIGDRGPLGIGIAENAL 1460

Query: 193  IRQFIHEGRRRFPATRSRSLMEIFQIAPNEVEPWSEFEDEVVWTLEED---GKFTLKSAY 363
            I   +   RRR    R R L E+        +   + +D  +W  E D    KF+ +  +
Sbjct: 1461 IEDVVRNHRRR--RHRVRILNEMEDEIDKLRDRMDQEQDIPLWKQEGDRFLNKFSTQKTW 1518

Query: 364  KRVCNLTDQDITWPSLIWFKGCIKKHSLCSWMFLRRRLKTKEFLLQRNVQCDSLCVLC 537
             ++      D  W   IWF     K+S  +W+  R RL+T + +   N   D+LCVLC
Sbjct: 1519 LQL-RQKQPDCRWSKGIWFPQYTPKYSFLAWVARRNRLQTCDRIHMWNATVDTLCVLC 1575


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 6/181 (3%)
 Frame = +1

Query: 13   SWGWKSLLRVRTLANSHVKWLVGNGHTIKFWTDPWLNGGRLKDSYGDRAIYDMGL-GDAV 189
            SW W+ +L++R +A S  +  VGNG +  FW D W   GRL D+ GD+   D+G+  +A 
Sbjct: 574  SWIWRKILKIRDVAKSFSRVEVGNGESASFWYDHWSAHGRLIDTVGDKGTIDLGIPREAS 633

Query: 190  TIRQFIHEGRRRFPATRSRSLMEIFQIAPNEVEPWSEFEDEVVWTLEED---GKFTLKSA 360
                +    RRR    R+  L EI ++   +    S+ ED V+W  + D     F+ +  
Sbjct: 634  VADAWTRRSRRRH---RTSLLNEIEEMMAYQRIHHSDAEDTVLWRGKNDVFKPHFSTRDT 690

Query: 361  YKRVCNLTDQDITWPSLIWFKGCIKKHSLCSWMFLRRRLKTKEFLLQRNV--QCDSLCVL 534
            +  +   T   ++W   +WF+    K++LC+W+ +  RL T + +L+ N        CVL
Sbjct: 691  W-HLIKATSSTVSWHKGVWFRHATPKYALCTWLAIHNRLPTGDRMLKWNSSGSVSGNCVL 749

Query: 535  C 537
            C
Sbjct: 750  C 750


>ref|XP_008460525.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750 [Cucumis melo]
          Length = 507

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 1/176 (0%)
 Frame = +1

Query: 13  SWGWKSLLRVRTLANSHVKWLVGNGHTIKFWTDPWLNGGRLKDSYGDRAIYDMGLGDAVT 192
           SW  +++LR R      V+  VGNG++ + W DPWL  G + +  G+R +YD        
Sbjct: 288 SWCLRAILRKREKLKHLVRMKVGNGNSFRVWLDPWLPEGAILEQVGERVMYDAASRRKAR 347

Query: 193 IRQFIH-EGRRRFPATRSRSLMEIFQIAPNEVEPWSEFEDEVVWTLEEDGKFTLKSAYKR 369
           +  FI  +G   +P   S  L+++++    EV P     D  VW     G F++ SA++ 
Sbjct: 348 LSDFIDPDGEWLWPRV-SLELIDLWE-RVQEVSPCLSVSDSWVWVPGRRGGFSIASAWEA 405

Query: 370 VCNLTDQDITWPSLIWFKGCIKKHSLCSWMFLRRRLKTKEFLLQRNVQCDSLCVLC 537
           V       + W  L+W  G I+KH  C+W+ ++ RL T + L + +     LC+LC
Sbjct: 406 V-RPRGGRVLWDGLLWGGGNIQKHFFCAWLAIKDRLGTIDRLHRWDSSVPMLCILC 460


>ref|XP_009108094.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 506

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 59/182 (32%), Positives = 84/182 (46%), Gaps = 7/182 (3%)
 Frame = +1

Query: 13  SWGWKSLLRVRTLANSHVKWLVGNGHTIKFWTDPWLNGGRLKDSYGDRAIYDMGLGDAVT 192
           SW W+ LL++R LA    K  V NG    FW D W   G LKD  G+R    MG+ +   
Sbjct: 210 SWVWRKLLKLRELAKQFFKREVRNGKVTSFWFDVWSPLGCLKDVLGERGYIAMGISENAV 269

Query: 193 IRQFIHEGRRRFPATRSRSLMEIFQIAPNEV----EPWSEFEDEVVWTLEEDGKFTLKSA 360
           +   +   RRR      R  + +     NE+       SE ED  +W  +++GK+    +
Sbjct: 270 MADVLGNHRRR------RHRLSLLNEIENEIALLQADSSEEEDTPLWK-QKEGKYASVFS 322

Query: 361 YKRV---CNLTDQDITWPSLIWFKGCIKKHSLCSWMFLRRRLKTKEFLLQRNVQCDSLCV 531
            K+       T Q   W   IWF     K+S   W+ LR+RL+T + + Q N   D+ CV
Sbjct: 323 SKKTWLQIRSTQQICEWSKGIWFTQSTPKYSFLVWVALRQRLQTYDRIQQWNGAVDATCV 382

Query: 532 LC 537
           LC
Sbjct: 383 LC 384


>ref|XP_009112956.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 433

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 57/183 (31%), Positives = 86/183 (46%), Gaps = 8/183 (4%)
 Frame = +1

Query: 13  SWGWKSLLRVRTLANSHVKWLVGNGHTIKFWTDPWLNGGRLKDSYGDRAIYDMGLGDAVT 192
           SW WK LL++R++A   +K  VGNG    FW + W   G LK+  GDR +  +G+ +  T
Sbjct: 131 SWMWKKLLKMRSIARQFLKVEVGNGSQTSFWHEVWSQIGCLKEVVGDRGVIALGIANNAT 190

Query: 193 IRQFIHEGRRRFPATRSRSLMEIFQIAPNEVEPW-----SEFEDEVVWTLEED---GKFT 348
           +   I   RRR      R    I     +E++       ++ +D  +W   E     KF+
Sbjct: 191 MADVISNHRRR------RHRQSILNDIEDEIDRLRIGGSADIDDVKLWKWGEGKYLSKFS 244

Query: 349 LKSAYKRVCNLTDQDITWPSLIWFKGCIKKHSLCSWMFLRRRLKTKEFLLQRNVQCDSLC 528
            K  +++V N   Q   W   IWF     K+S   W+  R RL+T + +   NV   + C
Sbjct: 245 SKRTWQQVRN-EHQTCAWSQGIWFPQSTPKYSFMLWIARRNRLQTGDKMQAWNVSVSTEC 303

Query: 529 VLC 537
           VLC
Sbjct: 304 VLC 306


>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
          Length = 504

 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 3/178 (1%)
 Frame = +1

Query: 13  SWGWKSLLRVRTLANSHVKWLVGNGHTIKFWTDPWLNGGRLKDSYGDRAIYDMGLGDAVT 192
           SW W+ +L+ R +A +  K  + NG    FW D W + GRL +S GDR   D+G+    T
Sbjct: 257 SWMWRKILKFRDIARTLCKVEINNGAQTSFWYDDWSDLGRLIESAGDRGAIDLGINKHAT 316

Query: 193 IRQFIHEGRRRFPATRSRSLMEIFQIAPNEVEPWSEFEDEVVWTLEED---GKFTLKSAY 363
           + +    G RR    R+  L  + +         ++ ED  +W  +E+     F+ K  +
Sbjct: 317 VVE--AWGNRRRRRHRANFLNRVEERLVLSWNSRNQAEDCALWKGKENRFRSIFSTKDTW 374

Query: 364 KRVCNLTDQDITWPSLIWFKGCIKKHSLCSWMFLRRRLKTKEFLLQRNVQCDSLCVLC 537
             +  ++++ + W   +WF   I KH+ C W+ +  RL T + +   N+  D+ C+LC
Sbjct: 375 NHIRTVSNK-VAWYKGVWFAQAIPKHAFCMWLAVHNRLSTGDRMTLWNMGVDATCILC 431


>ref|XP_009119497.1| PREDICTED: uncharacterized protein LOC103844466 [Brassica rapa]
          Length = 1508

 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 57/185 (30%), Positives = 87/185 (47%), Gaps = 10/185 (5%)
 Frame = +1

Query: 13   SWGWKSLLRVRTLANSHVKWLVGNGHTIKFWTDPWLNGGRLKDSYGDRAIYDMGLGDAVT 192
            SW W+ L+++R  A    K  VG+G+   FW D W + GRL D +G   + DMG+    T
Sbjct: 1213 SWMWRKLVKLRDKAKDFHKMQVGDGNNTSFWFDCWSSMGRLYDLFGAHGVIDMGVSMTTT 1272

Query: 193  IRQFIHEGRRRFPATRSRSLMEIFQIAPNEVEPWSE-------FEDEVVWTLEEDGKFTL 351
            +   +   RRR      R  +++F    NEVE   E        E +V    + +GK+  
Sbjct: 1273 VAVALSNRRRR------RHRIDVF----NEVEKICEDQRLKLTGETDVALWKQSEGKYQA 1322

Query: 352  KSAYKRVCNL---TDQDITWPSLIWFKGCIKKHSLCSWMFLRRRLKTKEFLLQRNVQCDS 522
                K+   L    D  + W   IW+K  I K++   W+ ++ RL T + +L  NV  + 
Sbjct: 1323 VFKTKQTWELIRKEDPPVQWWKSIWYKHHIPKYAFFHWLAIQNRLSTGDRMLTWNVGANP 1382

Query: 523  LCVLC 537
             CVLC
Sbjct: 1383 SCVLC 1387


>gb|AID60144.1| hypothetical protein [Brassica napus]
          Length = 436

 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 64/189 (33%), Positives = 96/189 (50%), Gaps = 13/189 (6%)
 Frame = +1

Query: 13  SWGWKSLLRVRTLANSHVKWLVGNGHTIKFWTDPWLNGGRLKDSYGDRAIYDMGLG---- 180
           SW W+SL ++R  A   +K  VG+G T  FW D W + G L +  G+R     GL     
Sbjct: 135 SWIWRSLCKLRPKARPFIKCQVGSGITASFWMDDWTSLGPLIEVVGERGPVVTGLSINAR 194

Query: 181 --DAVTIRQFIHEGRRRFPATRSRSLMEIFQIAPNEVEPW--SEFEDEVVW-TLEEDGK- 342
             DA+T   +  E  R    +RS S+M +    P + +P   SE +D  VW T   +G  
Sbjct: 195 VVDALTSDGWCFERSR----SRSPSIMLLRDSMP-DAQPILNSEVDDTYVWVTSGHNGSE 249

Query: 343 -FTLKSAYKRV--CNLTDQDITWPSLIWFKGCIKKHSLCSWMFLRRRLKTKEFLLQRNVQ 513
            F+    +KR+  C L   ++ W  +IWF G I KH+  SW+  R R+ T++ LL+  + 
Sbjct: 250 TFSTSETWKRLFPCML---EVFWHEVIWFSGRIPKHAFLSWVAARDRMVTRDRLLRWGLL 306

Query: 514 CDSLCVLCI 540
             + CVLC+
Sbjct: 307 VPATCVLCV 315


>ref|XP_009121373.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 544

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 4/180 (2%)
 Frame = +1

Query: 10  ASWGWKSLLRVRTLANSHVKWLVGNGHTIKFWTDPWLNGGRLKDSYGDRAIYDMGLGDAV 189
           +SW WK++LR+R LA+  +K  +GNG  I+FW+D W   G L   +G+R    + +  + 
Sbjct: 248 SSWTWKAILRLRGLASQFIKAKLGNGEKIRFWSDNWTPYGSLLTYFGERGPSQLQIPISA 307

Query: 190 TIRQFIHEGRRRFPATRSRSLMEIFQIAPNEVE--PWSEFEDEVVWTL--EEDGKFTLKS 357
           T+              RS    E+ Q     +E    S  ED  VW+L  EE   F +K 
Sbjct: 308 TVSDTCTSSGWIMRGARSNE-AEVLQTYLTTIENPRLSSVEDCYVWSLQGEEFNTFQIKI 366

Query: 358 AYKRVCNLTDQDITWPSLIWFKGCIKKHSLCSWMFLRRRLKTKEFLLQRNVQCDSLCVLC 537
           A++ + N   Q   W   +WF G + +H+   W+  + RL T+  L    +   + C LC
Sbjct: 367 AWEGIRN-RGQTQAWTRNVWFSGAVPRHAFTFWVASQDRLPTRARLASWGMNTPTTCCLC 425


>ref|XP_009144139.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 406

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
 Frame = +1

Query: 13  SWGWKSLLRVRTLANSHVKWLVGNGHTIKFWTDPWLNGGRLKDSYGDRAIYDMGLGDAVT 192
           SW W+ ++++R LA S++K  V NG    FW D W   G LKD  G+     +G+ +   
Sbjct: 107 SWMWRKIMKLRDLAKSYLKMEVYNGEHTSFWYDSWSRFGCLKDLLGEGGKLALGITENTR 166

Query: 193 IRQFIHEGRRRFPATRSRSLMEIFQIAPNEVE----PWSEFEDEVVWTLEED---GKFTL 351
           + + + + RRR      R  + I     +EVE      +E ED  +W   ED    +F+ 
Sbjct: 167 VDEVMLKHRRR------RHRLRILNEVEDEVEILRSKRTEAEDIPLWKQREDRFSNQFST 220

Query: 352 KSAYKRVCNLTDQDITWPSLIWFKGCIKKHSLCSWMFLRRRLKTKEFLLQRNVQCDSLCV 531
           K  ++ +   +  + +W   +WF     K+S   W+ +R RL+T + +   N   D+ C+
Sbjct: 221 KKTWQAI-RQSRAECSWSRGVWFPQSTPKYSFLVWVAIRNRLQTHDRMKMWNTSIDTKCI 279

Query: 532 LC 537
           LC
Sbjct: 280 LC 281


>ref|XP_009147143.1| PREDICTED: uncharacterized protein LOC103870729 [Brassica rapa]
          Length = 987

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 60/184 (32%), Positives = 89/184 (48%), Gaps = 9/184 (4%)
 Frame = +1

Query: 13   SWGWKSLLRVRTLANSHVKWLVGNGHTIKFWTDPWLNGGRLKDSYGDRAIYDMGLG-DAV 189
            SW  +++ ++R +A   V   VG G+T  FW D W + G L D  G+R     GL  +AV
Sbjct: 684  SWIRRAICKLRAIARPMVLCEVGTGNTASFWFDHWTSAGPLIDLVGERGPIVTGLSINAV 743

Query: 190  TIRQFIHEGRRRFPATRSRSLMEIFQIA----PNEVEPWS-EFEDEVVWTLE---EDGKF 345
                  +EG R     RSRS   I  +     PN  E  S E ED  VW  E    +G F
Sbjct: 744  VADALTNEGWR---LDRSRSRSPIISLVKACLPNAQEILSSEVEDRFVWYPEIGRGNGSF 800

Query: 346  TLKSAYKRVCNLTDQDITWPSLIWFKGCIKKHSLCSWMFLRRRLKTKEFLLQRNVQCDSL 525
            +    + RV + +   + W   +WF G I KH+  +W+  R R+ T++ L++  +   + 
Sbjct: 801  SASKTW-RVLHPSPTQVPWHKAVWFAGRIPKHAFITWIAARNRMVTRDRLIRWGLSVPAR 859

Query: 526  CVLC 537
            CVLC
Sbjct: 860  CVLC 863


>ref|XP_010026295.1| PREDICTED: uncharacterized protein LOC104416631 [Eucalyptus grandis]
          Length = 1616

 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 3/180 (1%)
 Frame = +1

Query: 7    YASWGWKSLLRVRTLANSHVKWLVGNGHTIKFWTDPWLNGGRLKDSYGDRAIYDMGLGDA 186
            ++SW WK LLR+R++   H +W +GNG ++ FW DPW   G L     ++ IY  G+   
Sbjct: 1321 FSSWAWKKLLRLRSIYQQHFRWRIGNGRSVSFWFDPWHLNGPLNRLISNQEIYRSGIPRD 1380

Query: 187  VTIRQFIHEGRRRFPATRSRSLMEIFQIAPNEVEPWSEFE---DEVVWTLEEDGKFTLKS 357
             ++            A  +     +  I  N  +P  EF    D   W     G+F++ S
Sbjct: 1381 ASVAD----------ALSTPLGWYVINIMANWWDPIPEFNQQADRFQWIRHPSGRFSIAS 1430

Query: 358  AYKRVCNLTDQDITWPSLIWFKGCIKKHSLCSWMFLRRRLKTKEFLLQRNVQCDSLCVLC 537
            A++ +    D  ++W S +W      ++    W+  R RL T+  LL       +LC  C
Sbjct: 1431 AWELLRPKGDA-VSWSSFVWSSSIPPRYQTHLWLITRNRLPTQVLLLSYARIPAALCPFC 1489


>ref|XP_009144587.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 357

 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 5/180 (2%)
 Frame = +1

Query: 13  SWGWKSLLRVRTLANSHVKWLVGNGHTIKFWTDPWLNGGRLKDSYGDRAIYDMGLGDAVT 192
           SW WK LL++R +A   +K  + +G  +KFWTD W   GRL +  GDR    +G+  +  
Sbjct: 146 SWVWKKLLQLRPVAQRFLKMDIHDGKLVKFWTDIWHPIGRLIEIVGDRGRLKLGIAISAC 205

Query: 193 IRQFIHEGRRRFPATRSRSLME-IFQIAPNEVEPWSEFEDEVVWTLEED---GKFTLKSA 360
           I   + E   RF  TR  ++   I ++    VE  +  +DEV+W  ++D    +F+  + 
Sbjct: 206 IADVLVENVWRFRRTRDTTVQNMIVKVQELGVELETNVQDEVLWKRKDDENGREFSAATT 265

Query: 361 YKRVCNLTDQDITWPSLIWFKGCIKKHSLCSWMFLRRRLKT-KEFLLQRNVQCDSLCVLC 537
           ++ +       + W  LIWF   + +++  +W+ ++ RL T  +      VQC   CV C
Sbjct: 266 WEHI-RCKRPVVVWSKLIWFAQGVPRYAFIAWLAVKDRLSTGSKMRAWGQVQC---CVFC 321


>gb|AAC24057.1| Contains similarity to reverse transcriptase-like protein
           gb|2244803 from A. thaliana chromosome 4 contig
           gb|Z97336 [Arabidopsis thaliana]
          Length = 404

 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 9/184 (4%)
 Frame = +1

Query: 13  SWGWKSLLRVRTLANSHVKWLVGNGHTIKFWTDPWLNGGRLKDSYGDRAIYDMGL----- 177
           SW WK LL+ R +A+   +  V NG T  FW D W + GRL D  G+R   D+G+     
Sbjct: 167 SWMWKKLLKYRAVASPLCRAEVKNGQTTSFWYDNWSDLGRLSDLVGERGAIDLGIDWQKS 226

Query: 178 -GDAVTIRQFIHEGRRRFPATRSRSLMEIFQIAPNEVEPWSEFEDEVVWTLEED---GKF 345
             DA T+R+     RRR    R   LM+I +    +++   +  D ++W    D    +F
Sbjct: 227 VADAWTMRR-----RRRH---RDGLLMQIEEALNKKMQNRKDEADHILWRGINDTYRPRF 278

Query: 346 TLKSAYKRVCNLTDQDITWPSLIWFKGCIKKHSLCSWMFLRRRLKTKEFLLQRNVQCDSL 525
           + K  +  +  ++   ITW   +WF     + S C W+ +  RL T + +   NV     
Sbjct: 279 STKDTWHHLRTIS-PTITWHKGVWFTHATPRQSFCVWLAVLNRLSTGDRMRMWNVGATDT 337

Query: 526 CVLC 537
           C LC
Sbjct: 338 CFLC 341


>ref|XP_010549577.1| PREDICTED: uncharacterized protein LOC104820715 [Tarenaya
            hassleriana]
          Length = 1919

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 5/180 (2%)
 Frame = +1

Query: 13   SWGWKSLLRVRTLANSHVKWLVGNGHTIKFWTDPWLNGGRLKDSYGDRAIYDMGLGDAVT 192
            SW W+ LL++R LA   ++  VGNG +  FW D WL  G L +   +     +G+    T
Sbjct: 1436 SWAWRRLLKIRPLAYPFLRCQVGNGRSCSFWFDSWLPSGPLINVLCELGPRQLGIPRNAT 1495

Query: 193  IRQFIHEGRRRFPATRSRSLMEIFQIAPNEVEPWSEFEDEVVWTLEEDGK-----FTLKS 357
            + + +       P  RS   ++I     N   P  +  D+V +  ++        F+   
Sbjct: 1496 VNRAVDGEGWLLPPARSPQAVQIHCELLNHPVPHPDNNDDVFYWADKHCSDRLPIFSTSK 1555

Query: 358  AYKRVCNLTDQDITWPSLIWFKGCIKKHSLCSWMFLRRRLKTKEFLLQRNVQCDSLCVLC 537
            A+K +  +    +TW   +WF   I KHS   W+  + RL TK+ LL   +     CVLC
Sbjct: 1556 AWK-LHQILPPPVTWHKSVWFPRSIPKHSFIVWLAAKNRLPTKDRLLSWGLDVADTCVLC 1614