BLASTX nr result

ID: Cinnamomum23_contig00025844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00025844
         (318 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010241799.1| PREDICTED: pentatricopeptide repeat-containi...   115   1e-23
gb|ERM99201.1| hypothetical protein AMTR_s00092p00099090 [Ambore...    77   6e-12
ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containi...    61   3e-07
ref|XP_006393847.1| hypothetical protein EUTSA_v10005524mg [Eutr...    59   1e-06
ref|XP_010921440.1| PREDICTED: pentatricopeptide repeat-containi...    58   3e-06
ref|XP_007153862.1| hypothetical protein PHAVU_003G071000g [Phas...    58   3e-06
gb|KHN06799.1| Pentatricopeptide repeat-containing protein [Glyc...    57   4e-06
ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
ref|XP_010680017.1| PREDICTED: pentatricopeptide repeat-containi...    56   8e-06
ref|XP_010274081.1| PREDICTED: pentatricopeptide repeat-containi...    56   8e-06
ref|XP_006344748.1| PREDICTED: pentatricopeptide repeat-containi...    56   8e-06

>ref|XP_010241799.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Nelumbo nucifera]
          Length = 619

 Score =  115 bits (288), Expect = 1e-23
 Identities = 54/96 (56%), Positives = 73/96 (76%)
 Frame = -2

Query: 290 FIISHLILSLSQRFSSFDYALSIYSHFPNPNTFLFNAMLQSLSLSTQHQKKTISIYLLQM 111
           F+I++LI  LSQRF + +Y+ SI++H  NPNTFLFNAM+Q+LS +   Q   I +Y+LQM
Sbjct: 43  FLITNLITVLSQRFRAINYSFSIFTHTHNPNTFLFNAMIQALSETPGFQSNAIQLYILQM 102

Query: 110 RNSQCPSSRPNCFTFPPLLKSCAASFSLIEPIKEIH 3
           R    P+ RPN FTFPPLLK+C A+F L++PI+EIH
Sbjct: 103 RYGTEPTRRPNRFTFPPLLKACVATFRLVKPIQEIH 138


>gb|ERM99201.1| hypothetical protein AMTR_s00092p00099090 [Amborella trichopoda]
          Length = 306

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 44/95 (46%), Positives = 60/95 (63%)
 Frame = -2

Query: 287 IISHLILSLSQRFSSFDYALSIYSHFPNPNTFLFNAMLQSLSLSTQHQKKTISIYLLQMR 108
           +IS LI SLS R +   Y+LS+++HFPNP T+L N MLQ+LS +  H +     + L   
Sbjct: 59  LISKLI-SLSSRLTRIAYSLSLFTHFPNPTTYLSNTMLQALSDNGLHAR----AFSLYKS 113

Query: 107 NSQCPSSRPNCFTFPPLLKSCAASFSLIEPIKEIH 3
            S   SS PN FTFPPLLK+C A    +EP +++H
Sbjct: 114 FSLYHSSPPNRFTFPPLLKAC-AGLQALEPTRQVH 147


>ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Glycine max]
          Length = 611

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 34/98 (34%), Positives = 59/98 (60%), Gaps = 7/98 (7%)
 Frame = -2

Query: 275 LILSLSQRFSSFD-----YALSIYSHFPNPNTFLFNAMLQ--SLSLSTQHQKKTISIYLL 117
           L  ++ Q +SS       YA  ++ HFPNPN+F++N +++  + S +T H+ K + +Y  
Sbjct: 59  LYTNILQHYSSLTQPNLTYATRVFHHFPNPNSFMWNTLIRVYARSTNTNHKHKAMELYKT 118

Query: 116 QMRNSQCPSSRPNCFTFPPLLKSCAASFSLIEPIKEIH 3
            M   +  ++ P+  TFP +LK+CA +FSL E  K++H
Sbjct: 119 MMTMEE-KTAVPDNHTFPIVLKACAYTFSLCEG-KQVH 154


>ref|XP_006393847.1| hypothetical protein EUTSA_v10005524mg [Eutrema salsugineum]
           gi|557090486|gb|ESQ31133.1| hypothetical protein
           EUTSA_v10005524mg [Eutrema salsugineum]
          Length = 616

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 36/95 (37%), Positives = 53/95 (55%)
 Frame = -2

Query: 287 IISHLILSLSQRFSSFDYALSIYSHFPNPNTFLFNAMLQSLSLSTQHQKKTISIYLLQMR 108
           I   L   LS   SS+ YAL ++  F  P+TFL+N M++  S S Q Q+  +  Y +   
Sbjct: 46  ITKFLSFCLSSTSSSY-YALHVFQGFDRPDTFLWNLMIRGFSCSDQPQRSLLLYYRM--- 101

Query: 107 NSQCPSSRPNCFTFPPLLKSCAASFSLIEPIKEIH 3
              C S+  N +TFP LLK+C ++ S +E  K+IH
Sbjct: 102 --LCSSAPHNAYTFPFLLKAC-SNLSALEETKQIH 133


>ref|XP_010921440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Elaeis guineensis]
          Length = 659

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 31/75 (41%), Positives = 44/75 (58%)
 Frame = -2

Query: 251 FSSFDYALSIYSHFPNPNTFLFNAMLQSLSLSTQHQKKTISIYLLQMRNSQCPSSRPNCF 72
           FSSFD A+ ++   P+P+ FL+NA+++  SL     +K IS Y   M       S PN F
Sbjct: 71  FSSFDSAVKVFDQVPDPHAFLWNALIRG-SLDNHIPRKAISFYCSMM----AQGSTPNKF 125

Query: 71  TFPPLLKSCAASFSL 27
           TFP L K+C A+ +L
Sbjct: 126 TFPSLFKACTAAKAL 140


>ref|XP_007153862.1| hypothetical protein PHAVU_003G071000g [Phaseolus vulgaris]
           gi|561027216|gb|ESW25856.1| hypothetical protein
           PHAVU_003G071000g [Phaseolus vulgaris]
          Length = 610

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 31/98 (31%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
 Frame = -2

Query: 290 FIISHLILSLSQRFSSFDYALSIYSHFPNPNTFLFNAMLQSL--SLSTQHQKKTISIYLL 117
           F+ + ++L  S   +  +YA  ++ HF NPN+F++N ++++   S +T H+ K + +Y  
Sbjct: 61  FLYTRILLYSS--VADLNYATRVFHHFSNPNSFMWNTLIRAYARSTNTNHKHKAMELYKA 118

Query: 116 QMRNSQCPSSRPNCFTFPPLLKSCAASFSLIEPIKEIH 3
            +   +  ++ P+  TFP +LK+CA +FSL E  K++H
Sbjct: 119 MVTGEE-ETAVPDNHTFPFVLKACAYTFSLCEG-KQVH 154


>gb|KHN06799.1| Pentatricopeptide repeat-containing protein [Glycine soja]
          Length = 591

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 32/84 (38%), Positives = 49/84 (58%)
 Frame = -2

Query: 290 FIISHLILSLSQRFSSFDYALSIYSHFPNPNTFLFNAMLQSLSLSTQHQKKTISIYLLQM 111
           + +SHL L+ S +F+S  YA +I++H PNP  FL+N ++ SL   T H  +    + L  
Sbjct: 38  YYLSHL-LNTSSKFAS-TYAFTIFNHIPNPTLFLYNTLISSL---THHSDQIHLAFSLYN 92

Query: 110 RNSQCPSSRPNCFTFPPLLKSCAA 39
                 + +PN FTFP L K+CA+
Sbjct: 93  HILTHKTLQPNSFTFPSLFKACAS 116


>ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Glycine max]
          Length = 591

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 32/84 (38%), Positives = 49/84 (58%)
 Frame = -2

Query: 290 FIISHLILSLSQRFSSFDYALSIYSHFPNPNTFLFNAMLQSLSLSTQHQKKTISIYLLQM 111
           + +SHL L+ S +F+S  YA +I++H PNP  FL+N ++ SL   T H  +    + L  
Sbjct: 38  YYLSHL-LNTSSKFAS-TYAFTIFNHIPNPTLFLYNTLISSL---THHSDQIHLAFSLYN 92

Query: 110 RNSQCPSSRPNCFTFPPLLKSCAA 39
                 + +PN FTFP L K+CA+
Sbjct: 93  HILTHKTLQPNSFTFPSLFKACAS 116


>ref|XP_010680017.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic [Beta vulgaris subsp. vulgaris]
           gi|870858163|gb|KMT09689.1| hypothetical protein
           BVRB_6g131390 [Beta vulgaris subsp. vulgaris]
          Length = 417

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 30/95 (31%), Positives = 57/95 (60%)
 Frame = -2

Query: 287 IISHLILSLSQRFSSFDYALSIYSHFPNPNTFLFNAMLQSLSLSTQHQKKTISIYLLQMR 108
           +++  +L L   + + +YA SI+ H P+P+TF +N ++++ +++    +  I +Y L + 
Sbjct: 50  LVATQLLRLYSSYGNLNYATSIFHHIPSPSTFTWNLIIRAHTINGSSSQSLI-LYNLMI- 107

Query: 107 NSQCPSSRPNCFTFPPLLKSCAASFSLIEPIKEIH 3
              C    P+ FTFP +LK+CA + S +E  KE+H
Sbjct: 108 ---CTGVAPDKFTFPFVLKACAVT-SAVEKGKEVH 138


>ref|XP_010274081.1| PREDICTED: pentatricopeptide repeat-containing protein At1g04840
           [Nelumbo nucifera]
          Length = 668

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 30/78 (38%), Positives = 46/78 (58%)
 Frame = -2

Query: 272 ILSLSQRFSSFDYALSIYSHFPNPNTFLFNAMLQSLSLSTQHQKKTISIYLLQMRNSQCP 93
           ++S    F S +YALSI++HF  PN F+FN+++++L  +TQ +K       +   N Q  
Sbjct: 69  LISTCSLFRSIEYALSIFNHFSLPNLFVFNSLIRALCENTQFEKSIYCFVSMLQINVQ-- 126

Query: 92  SSRPNCFTFPPLLKSCAA 39
              PN  TFP +LKS A+
Sbjct: 127 ---PNRLTFPFVLKSAAS 141


>ref|XP_006344748.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09190-like [Solanum tuberosum]
          Length = 484

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 32/82 (39%), Positives = 45/82 (54%)
 Frame = -2

Query: 287 IISHLILSLSQRFSSFDYALSIYSHFPNPNTFLFNAMLQSLSLSTQHQKKTISIYLLQMR 108
           +ISH I S+    +   YA  I+ HF NPN FLFN+M++  SL   +Q   +    ++ R
Sbjct: 43  LISHFI-SICGSLNRMLYASLIFQHFQNPNIFLFNSMIKGYSLCGPYQNSVVFFSTMKQR 101

Query: 107 NSQCPSSRPNCFTFPPLLKSCA 42
                   P+ FTF PLLK+CA
Sbjct: 102 GIW-----PDEFTFAPLLKACA 118


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