BLASTX nr result

ID: Cinnamomum23_contig00025628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00025628
         (266 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011084811.1| PREDICTED: pentatricopeptide repeat-containi...    61   3e-07
ref|XP_009623481.1| PREDICTED: pentatricopeptide repeat-containi...    61   3e-07
ref|XP_009798485.1| PREDICTED: pentatricopeptide repeat-containi...    60   6e-07
ref|XP_010253060.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-06
ref|XP_002319343.2| hypothetical protein POPTR_0013s09430g, part...    58   3e-06
ref|XP_002520874.1| pentatricopeptide repeat-containing protein,...    57   6e-06

>ref|XP_011084811.1| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Sesamum indicum]
          Length = 775

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 28/37 (75%), Positives = 33/37 (89%)
 Frame = -3

Query: 264 CSWIEVRDKVDLFFSGDSSSPRTVEIHATLKSLRRIM 154
           CSWIEV++KVD+FFSGDSSSPRTV+I+ TL SLR  M
Sbjct: 722 CSWIEVKNKVDVFFSGDSSSPRTVKIYETLDSLRNSM 758


>ref|XP_009623481.1| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Nicotiana tomentosiformis]
          Length = 852

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 27/37 (72%), Positives = 34/37 (91%)
 Frame = -3

Query: 264 CSWIEVRDKVDLFFSGDSSSPRTVEIHATLKSLRRIM 154
           CSWIEV++K+D+FFS DSSSPRT+EI+ TL+SLR IM
Sbjct: 805 CSWIEVKNKLDVFFSSDSSSPRTIEIYETLQSLRIIM 841


>ref|XP_009798485.1| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Nicotiana sylvestris]
          Length = 852

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 26/37 (70%), Positives = 34/37 (91%)
 Frame = -3

Query: 264 CSWIEVRDKVDLFFSGDSSSPRTVEIHATLKSLRRIM 154
           CSWIEV++K+D+FFS DSSSPR++EI+ TL+SLR IM
Sbjct: 805 CSWIEVKNKLDVFFSSDSSSPRSIEIYETLQSLRSIM 841


>ref|XP_010253060.1| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Nelumbo nucifera]
          Length = 870

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = -3

Query: 264 CSWIEVRDKVDLFFSGDSSSPRTVEIHATLKSLRRIM 154
           CSWIEVR+ VD+FFSGDSSSPRTVE+  TL SL+R M
Sbjct: 822 CSWIEVRNGVDVFFSGDSSSPRTVEVCETLWSLKRNM 858


>ref|XP_002319343.2| hypothetical protein POPTR_0013s09430g, partial [Populus
           trichocarpa] gi|550325356|gb|EEE95266.2| hypothetical
           protein POPTR_0013s09430g, partial [Populus trichocarpa]
          Length = 792

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = -3

Query: 264 CSWIEVRDKVDLFFSGDSSSPRTVEIHATLKSLRRIM 154
           CSWIEV + +D+FFSGDSSSPRT+EI+  L SLRR M
Sbjct: 744 CSWIEVGNSIDVFFSGDSSSPRTIEIYDLLNSLRRNM 780


>ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540005|gb|EEF41583.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 833

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = -3

Query: 264 CSWIEVRDKVDLFFSGDSSSPRTVEIHATLKSLRRIM 154
           CSWIEVR+KVD+F+SGD SSP T EI+ TL SL+R M
Sbjct: 784 CSWIEVRNKVDVFYSGDCSSPITTEIYDTLSSLKRNM 820


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