BLASTX nr result

ID: Cinnamomum23_contig00025325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00025325
         (417 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010664012.1| PREDICTED: RNA-binding protein 24-A isoform ...   144   2e-32
ref|XP_010664015.1| PREDICTED: deleted in azoospermia-like isofo...   144   2e-32
ref|XP_012073568.1| PREDICTED: RNA-binding protein 24-A [Jatroph...   143   4e-32
ref|XP_007018664.1| RNA-binding (RRM/RBD/RNP motifs) family prot...   143   5e-32
ref|XP_007018663.1| RNA-binding family protein isoform 1 [Theobr...   143   5e-32
gb|KHG27980.1| RNA-binding 24 [Gossypium arboreum]                    141   1e-31
ref|XP_010270570.1| PREDICTED: RNA-binding protein 24-A [Nelumbo...   140   3e-31
ref|XP_010266283.1| PREDICTED: RNA-binding protein 38-like [Nelu...   140   3e-31
ref|XP_011041156.1| PREDICTED: RNA-binding protein 24-B-like [Po...   140   3e-31
gb|KDO85241.1| hypothetical protein CISIN_1g023475mg [Citrus sin...   140   3e-31
gb|KDO85240.1| hypothetical protein CISIN_1g023475mg [Citrus sin...   140   3e-31
gb|KDO85238.1| hypothetical protein CISIN_1g023475mg [Citrus sin...   140   3e-31
ref|XP_002307819.1| RNA recognition motif-containing family prot...   140   3e-31
ref|XP_006473858.1| PREDICTED: RNA-binding protein 24-B-like iso...   140   3e-31
ref|XP_006473857.1| PREDICTED: RNA-binding protein 24-B-like iso...   140   3e-31
ref|XP_006435451.1| hypothetical protein CICLE_v10003364mg [Citr...   140   3e-31
ref|XP_011034798.1| PREDICTED: RNA-binding protein 24-B isoform ...   140   4e-31
ref|XP_011034797.1| PREDICTED: RNA-binding protein 24-B isoform ...   140   4e-31
ref|XP_002300621.1| RNA recognition motif-containing family prot...   140   4e-31
gb|KJB14037.1| hypothetical protein B456_002G112500 [Gossypium r...   139   7e-31

>ref|XP_010664012.1| PREDICTED: RNA-binding protein 24-A isoform X1 [Vitis vinifera]
           gi|731427534|ref|XP_010664014.1| PREDICTED: RNA-binding
           protein 24-A isoform X1 [Vitis vinifera]
          Length = 285

 Score =  144 bits (364), Expect = 2e-32
 Identities = 70/81 (86%), Positives = 77/81 (95%), Gaps = 2/81 (2%)
 Frame = -3

Query: 238 MAFRPIPG--SGSSSNASFQFMNSPFGDTTYTKVFVGGLAWETQSETLRLHFEQFGEILE 65
           MA++PIPG  SGSSS++ FQF+NSPFGDTTYTKVFVGGLAWETQSET+R +FEQFGEILE
Sbjct: 1   MAYQPIPGPSSGSSSSSGFQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 64  AVVITDKNTGRSKGYGFVTFR 2
           AVVITDKNTGRSKGYGFVTFR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFR 81


>ref|XP_010664015.1| PREDICTED: deleted in azoospermia-like isoform X2 [Vitis vinifera]
           gi|297745603|emb|CBI40768.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score =  144 bits (364), Expect = 2e-32
 Identities = 70/81 (86%), Positives = 77/81 (95%), Gaps = 2/81 (2%)
 Frame = -3

Query: 238 MAFRPIPG--SGSSSNASFQFMNSPFGDTTYTKVFVGGLAWETQSETLRLHFEQFGEILE 65
           MA++PIPG  SGSSS++ FQF+NSPFGDTTYTKVFVGGLAWETQSET+R +FEQFGEILE
Sbjct: 1   MAYQPIPGPSSGSSSSSGFQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 64  AVVITDKNTGRSKGYGFVTFR 2
           AVVITDKNTGRSKGYGFVTFR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFR 81


>ref|XP_012073568.1| PREDICTED: RNA-binding protein 24-A [Jatropha curcas]
           gi|643728805|gb|KDP36742.1| hypothetical protein
           JCGZ_08033 [Jatropha curcas]
          Length = 285

 Score =  143 bits (361), Expect = 4e-32
 Identities = 69/81 (85%), Positives = 77/81 (95%), Gaps = 2/81 (2%)
 Frame = -3

Query: 238 MAFRPIPG--SGSSSNASFQFMNSPFGDTTYTKVFVGGLAWETQSETLRLHFEQFGEILE 65
           MA++PIPG  SGSSS++ FQ++NSPFGDTTYTKVFVGGLAWETQSET+R +FEQFGEILE
Sbjct: 1   MAYQPIPGPSSGSSSSSGFQYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 64  AVVITDKNTGRSKGYGFVTFR 2
           AVVITDKNTGRSKGYGFVTFR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFR 81


>ref|XP_007018664.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 2
           [Theobroma cacao] gi|508723992|gb|EOY15889.1|
           RNA-binding (RRM/RBD/RNP motifs) family protein isoform
           2 [Theobroma cacao]
          Length = 284

 Score =  143 bits (360), Expect = 5e-32
 Identities = 69/81 (85%), Positives = 77/81 (95%), Gaps = 2/81 (2%)
 Frame = -3

Query: 238 MAFRPIPG--SGSSSNASFQFMNSPFGDTTYTKVFVGGLAWETQSETLRLHFEQFGEILE 65
           MA++PIPG  SGSSS++ FQ++NSPFGDTTYTKVFVGGLAWETQSET+R +FEQFGEILE
Sbjct: 1   MAYQPIPGPSSGSSSSSGFQYINSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 64  AVVITDKNTGRSKGYGFVTFR 2
           AVVITDKNTGRSKGYGFVTFR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFR 81


>ref|XP_007018663.1| RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|508723991|gb|EOY15888.1| RNA-binding family protein
           isoform 1 [Theobroma cacao]
          Length = 319

 Score =  143 bits (360), Expect = 5e-32
 Identities = 69/81 (85%), Positives = 77/81 (95%), Gaps = 2/81 (2%)
 Frame = -3

Query: 238 MAFRPIPG--SGSSSNASFQFMNSPFGDTTYTKVFVGGLAWETQSETLRLHFEQFGEILE 65
           MA++PIPG  SGSSS++ FQ++NSPFGDTTYTKVFVGGLAWETQSET+R +FEQFGEILE
Sbjct: 1   MAYQPIPGPSSGSSSSSGFQYINSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 64  AVVITDKNTGRSKGYGFVTFR 2
           AVVITDKNTGRSKGYGFVTFR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFR 81


>gb|KHG27980.1| RNA-binding 24 [Gossypium arboreum]
          Length = 372

 Score =  141 bits (356), Expect = 1e-31
 Identities = 69/81 (85%), Positives = 76/81 (93%), Gaps = 2/81 (2%)
 Frame = -3

Query: 238 MAFRPIPG--SGSSSNASFQFMNSPFGDTTYTKVFVGGLAWETQSETLRLHFEQFGEILE 65
           MAF+ IPG  SGSSS++ FQ+MNSPFGDTTYTKVFVGGLAWETQSET+R +FEQFGEI+E
Sbjct: 1   MAFQQIPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEIVE 60

Query: 64  AVVITDKNTGRSKGYGFVTFR 2
           AVVITDKNTGRSKGYGFVTFR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFR 81


>ref|XP_010270570.1| PREDICTED: RNA-binding protein 24-A [Nelumbo nucifera]
          Length = 286

 Score =  140 bits (354), Expect = 3e-31
 Identities = 70/83 (84%), Positives = 74/83 (89%), Gaps = 4/83 (4%)
 Frame = -3

Query: 238 MAFRPIPGSGSSS----NASFQFMNSPFGDTTYTKVFVGGLAWETQSETLRLHFEQFGEI 71
           MAF  IPGSGS S    N+ FQF+NSPFGDTTYTKVFVGGLAWETQSET+R +FEQFGEI
Sbjct: 1   MAFIAIPGSGSGSGSSLNSGFQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 60

Query: 70  LEAVVITDKNTGRSKGYGFVTFR 2
           LEAVVITDKNTGRSKGYGFVTFR
Sbjct: 61  LEAVVITDKNTGRSKGYGFVTFR 83


>ref|XP_010266283.1| PREDICTED: RNA-binding protein 38-like [Nelumbo nucifera]
          Length = 287

 Score =  140 bits (354), Expect = 3e-31
 Identities = 69/83 (83%), Positives = 75/83 (90%), Gaps = 4/83 (4%)
 Frame = -3

Query: 238 MAFRPIPGSGS----SSNASFQFMNSPFGDTTYTKVFVGGLAWETQSETLRLHFEQFGEI 71
           MA+  IPG+GS    SSN+ FQF+NSPFGDTTYTKVFVGGLAWETQSET+R +FEQFGEI
Sbjct: 1   MAYATIPGTGSGSVSSSNSGFQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEI 60

Query: 70  LEAVVITDKNTGRSKGYGFVTFR 2
           LEAVVITDKNTGRSKGYGFVTFR
Sbjct: 61  LEAVVITDKNTGRSKGYGFVTFR 83


>ref|XP_011041156.1| PREDICTED: RNA-binding protein 24-B-like [Populus euphratica]
          Length = 286

 Score =  140 bits (353), Expect = 3e-31
 Identities = 68/81 (83%), Positives = 76/81 (93%), Gaps = 2/81 (2%)
 Frame = -3

Query: 238 MAFRPIPG--SGSSSNASFQFMNSPFGDTTYTKVFVGGLAWETQSETLRLHFEQFGEILE 65
           MA++ IPG  SGSSS++ FQ+MNSPFGDTTYTKVFVGGLAWETQSET+R +FEQFG+ILE
Sbjct: 1   MAYQAIPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILE 60

Query: 64  AVVITDKNTGRSKGYGFVTFR 2
           AVVITDKNTGRSKGYGFVTFR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFR 81


>gb|KDO85241.1| hypothetical protein CISIN_1g023475mg [Citrus sinensis]
           gi|641866557|gb|KDO85242.1| hypothetical protein
           CISIN_1g023475mg [Citrus sinensis]
           gi|641866558|gb|KDO85243.1| hypothetical protein
           CISIN_1g023475mg [Citrus sinensis]
          Length = 264

 Score =  140 bits (353), Expect = 3e-31
 Identities = 66/75 (88%), Positives = 72/75 (96%)
 Frame = -3

Query: 226 PIPGSGSSSNASFQFMNSPFGDTTYTKVFVGGLAWETQSETLRLHFEQFGEILEAVVITD 47
           P PGSGSSS++ FQ++NSPFGDTTYTKVFVGGLAWETQSET+R +FEQFGEILEAVVITD
Sbjct: 7   PGPGSGSSSSSGFQYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITD 66

Query: 46  KNTGRSKGYGFVTFR 2
           KNTGRSKGYGFVTFR
Sbjct: 67  KNTGRSKGYGFVTFR 81


>gb|KDO85240.1| hypothetical protein CISIN_1g023475mg [Citrus sinensis]
          Length = 258

 Score =  140 bits (353), Expect = 3e-31
 Identities = 66/75 (88%), Positives = 72/75 (96%)
 Frame = -3

Query: 226 PIPGSGSSSNASFQFMNSPFGDTTYTKVFVGGLAWETQSETLRLHFEQFGEILEAVVITD 47
           P PGSGSSS++ FQ++NSPFGDTTYTKVFVGGLAWETQSET+R +FEQFGEILEAVVITD
Sbjct: 7   PGPGSGSSSSSGFQYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITD 66

Query: 46  KNTGRSKGYGFVTFR 2
           KNTGRSKGYGFVTFR
Sbjct: 67  KNTGRSKGYGFVTFR 81


>gb|KDO85238.1| hypothetical protein CISIN_1g023475mg [Citrus sinensis]
          Length = 261

 Score =  140 bits (353), Expect = 3e-31
 Identities = 66/75 (88%), Positives = 72/75 (96%)
 Frame = -3

Query: 226 PIPGSGSSSNASFQFMNSPFGDTTYTKVFVGGLAWETQSETLRLHFEQFGEILEAVVITD 47
           P PGSGSSS++ FQ++NSPFGDTTYTKVFVGGLAWETQSET+R +FEQFGEILEAVVITD
Sbjct: 7   PGPGSGSSSSSGFQYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITD 66

Query: 46  KNTGRSKGYGFVTFR 2
           KNTGRSKGYGFVTFR
Sbjct: 67  KNTGRSKGYGFVTFR 81


>ref|XP_002307819.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222857268|gb|EEE94815.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 286

 Score =  140 bits (353), Expect = 3e-31
 Identities = 68/81 (83%), Positives = 76/81 (93%), Gaps = 2/81 (2%)
 Frame = -3

Query: 238 MAFRPIPG--SGSSSNASFQFMNSPFGDTTYTKVFVGGLAWETQSETLRLHFEQFGEILE 65
           MA++ IPG  SGSSS++ FQ+MNSPFGDTTYTKVFVGGLAWETQSET+R +FEQFG+ILE
Sbjct: 1   MAYQAIPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILE 60

Query: 64  AVVITDKNTGRSKGYGFVTFR 2
           AVVITDKNTGRSKGYGFVTFR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFR 81


>ref|XP_006473858.1| PREDICTED: RNA-binding protein 24-B-like isoform X2 [Citrus
           sinensis] gi|568839785|ref|XP_006473859.1| PREDICTED:
           RNA-binding protein 24-B-like isoform X3 [Citrus
           sinensis] gi|568839787|ref|XP_006473860.1| PREDICTED:
           RNA-binding protein 24-B-like isoform X4 [Citrus
           sinensis]
          Length = 163

 Score =  140 bits (353), Expect = 3e-31
 Identities = 66/75 (88%), Positives = 72/75 (96%)
 Frame = -3

Query: 226 PIPGSGSSSNASFQFMNSPFGDTTYTKVFVGGLAWETQSETLRLHFEQFGEILEAVVITD 47
           P PGSGSSS++ FQ++NSPFGDTTYTKVFVGGLAWETQSET+R +FEQFGEILEAVVITD
Sbjct: 7   PGPGSGSSSSSGFQYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITD 66

Query: 46  KNTGRSKGYGFVTFR 2
           KNTGRSKGYGFVTFR
Sbjct: 67  KNTGRSKGYGFVTFR 81


>ref|XP_006473857.1| PREDICTED: RNA-binding protein 24-B-like isoform X1 [Citrus
           sinensis] gi|641866554|gb|KDO85239.1| hypothetical
           protein CISIN_1g023475mg [Citrus sinensis]
          Length = 281

 Score =  140 bits (353), Expect = 3e-31
 Identities = 66/75 (88%), Positives = 72/75 (96%)
 Frame = -3

Query: 226 PIPGSGSSSNASFQFMNSPFGDTTYTKVFVGGLAWETQSETLRLHFEQFGEILEAVVITD 47
           P PGSGSSS++ FQ++NSPFGDTTYTKVFVGGLAWETQSET+R +FEQFGEILEAVVITD
Sbjct: 7   PGPGSGSSSSSGFQYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITD 66

Query: 46  KNTGRSKGYGFVTFR 2
           KNTGRSKGYGFVTFR
Sbjct: 67  KNTGRSKGYGFVTFR 81


>ref|XP_006435451.1| hypothetical protein CICLE_v10003364mg [Citrus clementina]
           gi|557537573|gb|ESR48691.1| hypothetical protein
           CICLE_v10003364mg [Citrus clementina]
          Length = 268

 Score =  140 bits (353), Expect = 3e-31
 Identities = 66/75 (88%), Positives = 72/75 (96%)
 Frame = -3

Query: 226 PIPGSGSSSNASFQFMNSPFGDTTYTKVFVGGLAWETQSETLRLHFEQFGEILEAVVITD 47
           P PGSGSSS++ FQ++NSPFGDTTYTKVFVGGLAWETQSET+R +FEQFGEILEAVVITD
Sbjct: 7   PGPGSGSSSSSGFQYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITD 66

Query: 46  KNTGRSKGYGFVTFR 2
           KNTGRSKGYGFVTFR
Sbjct: 67  KNTGRSKGYGFVTFR 81


>ref|XP_011034798.1| PREDICTED: RNA-binding protein 24-B isoform X2 [Populus euphratica]
          Length = 287

 Score =  140 bits (352), Expect = 4e-31
 Identities = 67/81 (82%), Positives = 76/81 (93%), Gaps = 2/81 (2%)
 Frame = -3

Query: 238 MAFRPIPG--SGSSSNASFQFMNSPFGDTTYTKVFVGGLAWETQSETLRLHFEQFGEILE 65
           MA++ +PG  SGSSS++ FQ+MNSPFGDTTYTKVFVGGLAWETQSET+R +FEQFG+ILE
Sbjct: 1   MAYQAVPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILE 60

Query: 64  AVVITDKNTGRSKGYGFVTFR 2
           AVVITDKNTGRSKGYGFVTFR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFR 81


>ref|XP_011034797.1| PREDICTED: RNA-binding protein 24-B isoform X1 [Populus euphratica]
          Length = 288

 Score =  140 bits (352), Expect = 4e-31
 Identities = 67/81 (82%), Positives = 76/81 (93%), Gaps = 2/81 (2%)
 Frame = -3

Query: 238 MAFRPIPG--SGSSSNASFQFMNSPFGDTTYTKVFVGGLAWETQSETLRLHFEQFGEILE 65
           MA++ +PG  SGSSS++ FQ+MNSPFGDTTYTKVFVGGLAWETQSET+R +FEQFG+ILE
Sbjct: 1   MAYQAVPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILE 60

Query: 64  AVVITDKNTGRSKGYGFVTFR 2
           AVVITDKNTGRSKGYGFVTFR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFR 81


>ref|XP_002300621.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222842347|gb|EEE79894.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 287

 Score =  140 bits (352), Expect = 4e-31
 Identities = 67/81 (82%), Positives = 76/81 (93%), Gaps = 2/81 (2%)
 Frame = -3

Query: 238 MAFRPIPG--SGSSSNASFQFMNSPFGDTTYTKVFVGGLAWETQSETLRLHFEQFGEILE 65
           MA++ +PG  SGSSS++ FQ+MNSPFGDTTYTKVFVGGLAWETQSET+R +FEQFG+ILE
Sbjct: 1   MAYQAVPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILE 60

Query: 64  AVVITDKNTGRSKGYGFVTFR 2
           AVVITDKNTGRSKGYGFVTFR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFR 81


>gb|KJB14037.1| hypothetical protein B456_002G112500 [Gossypium raimondii]
          Length = 192

 Score =  139 bits (350), Expect = 7e-31
 Identities = 68/81 (83%), Positives = 75/81 (92%), Gaps = 2/81 (2%)
 Frame = -3

Query: 238 MAFRPI--PGSGSSSNASFQFMNSPFGDTTYTKVFVGGLAWETQSETLRLHFEQFGEILE 65
           MAF+ I  P SGSSS++ FQ+MNSPFGDTTYTKVFVGGLAWETQSET+R +FEQFGEI+E
Sbjct: 1   MAFQQILGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEIVE 60

Query: 64  AVVITDKNTGRSKGYGFVTFR 2
           AVVITDKNTGRSKGYGFVTFR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFR 81


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