BLASTX nr result

ID: Cinnamomum23_contig00025150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00025150
         (253 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_005645057.1| light-harvesting complex I protein [Coccomyx...   115   1e-23
gb|KIZ02222.1| Chlorophyll a-b binding protein 7, chloroplastic ...   106   5e-21
ref|XP_002957416.1| light-harvesting protein of photosystem I [V...   102   1e-19
dbj|BAD06924.1| light-harvesting chlorophyll-a/b protein of phot...    95   2e-17
ref|XP_001691959.1| light-harvesting protein of photosystem I [C...    95   2e-17
gb|AAO16495.1| light-harvesting complex I protein [Chlamydomonas...    95   2e-17
gb|ABA01130.1| chloroplast light harvesting complex I protein [C...    94   4e-17
ref|XP_002945875.1| light harvesting complex a protein [Volvox c...    87   6e-15
tpg|DAA05901.1| TPA_inf: chloroplast light-harvesting complex I ...    86   7e-15
ref|XP_005645059.1| light harvesting complex a protein [Coccomyx...    79   1e-12
ref|XP_001696202.1| light-harvesting protein of photosystem I [C...    78   3e-12
emb|CEF99235.1| Chlorophyll A-B binding protein, plant [Ostreoco...    77   3e-12
ref|XP_003081427.1| PSI-associated light-harvesting chlorophyll ...    77   3e-12
gb|ABN10530.1| Lhca5 protein [Gentiana lutea]                          77   3e-12
ref|XP_011397429.1| Chlorophyll a-b binding protein 7, chloropla...    77   6e-12
ref|XP_009359490.1| PREDICTED: chlorophyll a-b binding protein P...    76   8e-12
emb|CDP01357.1| unnamed protein product [Coffea canephora]             76   8e-12
ref|XP_008393806.1| PREDICTED: chlorophyll a-b binding protein P...    76   8e-12
gb|AHM26631.1| a-b binding protein [Pyrus x bretschneideri]            76   8e-12
emb|CAA50763.1| light harvesting complex I chlorophyll binding p...    76   1e-11

>ref|XP_005645057.1| light-harvesting complex I protein [Coccomyxa subellipsoidea C-169]
           gi|384247025|gb|EIE20513.1| light-harvesting complex I
           protein [Coccomyxa subellipsoidea C-169]
          Length = 259

 Score =  115 bits (288), Expect = 1e-23
 Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 2/86 (2%)
 Frame = -2

Query: 252 WIENNKWFPFWSLLFSQLILTGWVEAKRWADYKNPGSQGDGSFFGLTDDFVAKENGYPGG 73
           W++NN  FPF +LLF Q+ILTGWVE KRW D+KNPGSQ DGSF G+TDDF    NGYPGG
Sbjct: 125 WVQNNPNFPFAALLFIQIILTGWVETKRWLDFKNPGSQADGSFLGVTDDFKGVANGYPGG 184

Query: 72  -LFDPFNLA-ADPGNYEEYKVKEIKN 1
            LFDPF L+    G  ++Y+  EIKN
Sbjct: 185 KLFDPFGLSRGSEGQLQKYQENEIKN 210


>gb|KIZ02222.1| Chlorophyll a-b binding protein 7, chloroplastic [Monoraphidium
           neglectum]
          Length = 237

 Score =  106 bits (265), Expect = 5e-21
 Identities = 54/82 (65%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
 Frame = -2

Query: 240 NKWFPFWSLLFSQLILTGWVEAKRWADYKNPGSQGDGSFFGLTDDFVAKENGYPGG-LFD 64
           N  F F +LL  Q +L GWVE+KR AD+ NPGSQGDGSFFG+TDDF  KENGYPGG  FD
Sbjct: 107 NSPFSFQTLLGVQFLLFGWVESKRLADFLNPGSQGDGSFFGITDDFKGKENGYPGGKYFD 166

Query: 63  PFNLA-ADPGNYEEYKVKEIKN 1
           PF L+  D   Y EYK KEIKN
Sbjct: 167 PFGLSRGDAAKYAEYKQKEIKN 188


>ref|XP_002957416.1| light-harvesting protein of photosystem I [Volvox carteri f.
           nagariensis] gi|300257220|gb|EFJ41471.1|
           light-harvesting protein of photosystem I [Volvox
           carteri f. nagariensis]
          Length = 241

 Score =  102 bits (254), Expect = 1e-19
 Identities = 52/84 (61%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
 Frame = -2

Query: 246 ENNKWFPFWSLLFSQLILTGWVEAKRWADYKNPGSQGDGSFFGLTDDFVAKENGYPGG-L 70
           +NN  FP  +LL +QL L GW E KRW D+KNPGSQGDGSF G TD+F   ENGYPGG  
Sbjct: 112 KNNIDFP--TLLITQLYLMGWAETKRWYDFKNPGSQGDGSFLGFTDEFKGLENGYPGGRF 169

Query: 69  FDPFNLA-ADPGNYEEYKVKEIKN 1
           FDP  L+  D   Y+EYK KEIKN
Sbjct: 170 FDPMGLSRGDADKYKEYKQKEIKN 193


>dbj|BAD06924.1| light-harvesting chlorophyll-a/b protein of photosystem I
           [Chlamydomonas reinhardtii]
          Length = 241

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 47/84 (55%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
 Frame = -2

Query: 246 ENNKWFPFWSLLFSQLILTGWVEAKRWADYKNPGSQGDGSFFGLTDDFVAKENGYPGG-L 70
           +NN  FP  +L+  Q  L GW E KRW D+KNPGSQ DGSF G T++F   ENGYPGG  
Sbjct: 112 KNNIDFP--TLMVIQFYLMGWAETKRWYDFKNPGSQADGSFLGFTEEFKGLENGYPGGRF 169

Query: 69  FDPFNLA-ADPGNYEEYKVKEIKN 1
           FDP  L+  D   Y+EYK KE+KN
Sbjct: 170 FDPMGLSRGDAAKYQEYKQKEVKN 193


>ref|XP_001691959.1| light-harvesting protein of photosystem I [Chlamydomonas
           reinhardtii] gi|158278686|gb|EDP04449.1|
           light-harvesting protein of photosystem I [Chlamydomonas
           reinhardtii]
          Length = 288

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 47/84 (55%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
 Frame = -2

Query: 246 ENNKWFPFWSLLFSQLILTGWVEAKRWADYKNPGSQGDGSFFGLTDDFVAKENGYPGG-L 70
           +NN  FP  +L+  Q  L GW E KRW D+KNPGSQ DGSF G T++F   ENGYPGG  
Sbjct: 112 KNNIDFP--TLMVIQFYLMGWAETKRWYDFKNPGSQADGSFLGFTEEFKGLENGYPGGRF 169

Query: 69  FDPFNLA-ADPGNYEEYKVKEIKN 1
           FDP  L+  D   Y+EYK KE+KN
Sbjct: 170 FDPMGLSRGDAAKYQEYKQKEVKN 193


>gb|AAO16495.1| light-harvesting complex I protein [Chlamydomonas reinhardtii]
          Length = 241

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 47/84 (55%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
 Frame = -2

Query: 246 ENNKWFPFWSLLFSQLILTGWVEAKRWADYKNPGSQGDGSFFGLTDDFVAKENGYPGG-L 70
           +NN  FP  +L+  Q  L GW E KRW D+KNPGSQ DGSF G T++F   ENGYPGG  
Sbjct: 112 KNNIDFP--TLMVIQFYLMGWAETKRWYDFKNPGSQADGSFLGFTEEFKGLENGYPGGRF 169

Query: 69  FDPFNLA-ADPGNYEEYKVKEIKN 1
           FDP  L+  D   Y+EYK KE+KN
Sbjct: 170 FDPMGLSRGDAAKYQEYKQKEVKN 193


>gb|ABA01130.1| chloroplast light harvesting complex I protein [Chlamydomonas
           incerta]
          Length = 241

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 47/84 (55%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
 Frame = -2

Query: 246 ENNKWFPFWSLLFSQLILTGWVEAKRWADYKNPGSQGDGSFFGLTDDFVAKENGYPGG-L 70
           +NN  FP  +L+  Q  L GW E KRW D+KNPGSQ DGSF G T++F   ENGYPGG  
Sbjct: 112 KNNIDFP--TLIVIQFYLMGWAETKRWYDFKNPGSQADGSFLGFTEEFKGLENGYPGGRF 169

Query: 69  FDPFNLA-ADPGNYEEYKVKEIKN 1
           FDP  L+  D   Y EYK KE+KN
Sbjct: 170 FDPMGLSRGDAAKYAEYKQKEVKN 193


>ref|XP_002945875.1| light harvesting complex a protein [Volvox carteri f. nagariensis]
           gi|5902596|gb|AAD55568.1|AF110786_1 light harvesting
           complex a protein [Volvox carteri f. nagariensis]
           gi|300268690|gb|EFJ52870.1| light harvesting complex a
           protein [Volvox carteri f. nagariensis]
          Length = 243

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 43/78 (55%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
 Frame = -2

Query: 228 PFWSLLFSQLILTGWVEAKRWADYKNPGSQGD-GSFFGLTDDFVAK-ENGYPGGLFDPFN 55
           PF +LL  QL LTG+VEAKRW D+K PGSQ + GSF G    F    +NGYPGG+FDP  
Sbjct: 118 PFGALLAVQLFLTGFVEAKRWQDFKKPGSQAEKGSFLGFETAFAGTGDNGYPGGIFDPLG 177

Query: 54  LAADPGNYEEYKVKEIKN 1
           L+ D     ++K+KEIKN
Sbjct: 178 LSKDADKLADWKLKEIKN 195


>tpg|DAA05901.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
           Lhca6 [Acetabularia acetabulum]
          Length = 201

 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 46/85 (54%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
 Frame = -2

Query: 243 NNKWFPFWSLLFSQLILTGWVEAKRWADYKNPGSQGDGSFFGLTDDFVAKENGYPGG-LF 67
           +N   PF +LL  + +  G+VE KRW D K+PGSQGDGS FG+TDDF  K  GYPGG  F
Sbjct: 81  DNSSVPFSALLMVEFLAMGFVETKRWYDIKSPGSQGDGSIFGITDDFKGKSVGYPGGTFF 140

Query: 66  DPFNLAADPGNYEEYK---VKEIKN 1
           DPF  +   G+ E YK   VKEI N
Sbjct: 141 DPFGFS--KGSEESYKTLQVKEIAN 163


>ref|XP_005645059.1| light harvesting complex a protein [Coccomyxa subellipsoidea C-169]
           gi|384247027|gb|EIE20515.1| light harvesting complex a
           protein [Coccomyxa subellipsoidea C-169]
          Length = 255

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 8/92 (8%)
 Frame = -2

Query: 252 WIENNKW------FPFWSLLFSQLILTGWVEAKRWADYKNPGSQG-DGSFFGLTDDFVAK 94
           W E  K+       PF +L+  ++    +VE KRW D+K PGSQG +GSF GL   F   
Sbjct: 107 WYEAGKYAQESSPIPFNTLIALEIFAFNFVEIKRWQDFKKPGSQGEEGSFVGLEGFFKGT 166

Query: 93  -ENGYPGGLFDPFNLAADPGNYEEYKVKEIKN 1
            ENGYPGG+FDP  L+  PG YE  K++EIKN
Sbjct: 167 GENGYPGGVFDPLGLSKGPG-YEAMKLREIKN 197


>ref|XP_001696202.1| light-harvesting protein of photosystem I [Chlamydomonas
           reinhardtii] gi|40714515|dbj|BAD06921.1|
           light-harvesting chlorophyll-a/b protein of photosystem
           I [Chlamydomonas reinhardtii]
           gi|158282427|gb|EDP08179.1| light-harvesting protein of
           photosystem I [Chlamydomonas reinhardtii]
          Length = 243

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
 Frame = -2

Query: 240 NKWFPFWSLLFSQLILTGWVEAKRWADYKNPGSQGD-GSFFGLTDDFV-AKENGYPGGLF 67
           N + P+ SLL  QL L G+VEAKRW D + PGSQG+ GSF G         E GYPGG F
Sbjct: 114 NSFAPWGSLLAVQLFLCGFVEAKRWQDIRKPGSQGEPGSFLGFEASLKGTSELGYPGGPF 173

Query: 66  DPFNLAADPGNYEEYKVKEIKN 1
           DP  L+ +   + ++K+KE+KN
Sbjct: 174 DPLGLSKEADKWADWKLKEVKN 195


>emb|CEF99235.1| Chlorophyll A-B binding protein, plant [Ostreococcus tauri]
          Length = 239

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 35/78 (44%), Positives = 42/78 (53%)
 Frame = -2

Query: 234 WFPFWSLLFSQLILTGWVEAKRWADYKNPGSQGDGSFFGLTDDFVAKENGYPGGLFDPFN 55
           W P   L F Q+ +  W E +RW D KNPGS      FG   +    + GYPGGLFD   
Sbjct: 118 WAPAGPLFFIQMAMFNWAEVRRWQDMKNPGSMNTDPLFGYNSNDTNTDVGYPGGLFDKLG 177

Query: 54  LAADPGNYEEYKVKEIKN 1
            A DP   +E K+KEIKN
Sbjct: 178 YAKDPAKAKELKLKEIKN 195


>ref|XP_003081427.1| PSI-associated light-harvesting chlorophyll a/b binding protein,
           (IC) [Ostreococcus tauri] gi|63029293|gb|AAY27545.1|
           chloroplast light-harvesting complex I protein precursor
           Lhca2 [Ostreococcus tauri]
          Length = 242

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 35/78 (44%), Positives = 42/78 (53%)
 Frame = -2

Query: 234 WFPFWSLLFSQLILTGWVEAKRWADYKNPGSQGDGSFFGLTDDFVAKENGYPGGLFDPFN 55
           W P   L F Q+ +  W E +RW D KNPGS      FG   +    + GYPGGLFD   
Sbjct: 121 WAPAGPLFFIQMAMFNWAEVRRWQDMKNPGSMNTDPLFGYNSNDTNTDVGYPGGLFDKLG 180

Query: 54  LAADPGNYEEYKVKEIKN 1
            A DP   +E K+KEIKN
Sbjct: 181 YAKDPAKAKELKLKEIKN 198


>gb|ABN10530.1| Lhca5 protein [Gentiana lutea]
          Length = 272

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 38/74 (51%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
 Frame = -2

Query: 219 SLLFSQLILTGWVEAKRWADYKNPGSQGDGSFFGLTDDFVAKENGYPGG-LFDPFNLAAD 43
           +L   Q++L G+VE KR+ D+KNPGSQG+ SFFGL       E GYPGG + +P  +A D
Sbjct: 152 TLFIVQMLLMGFVETKRYMDFKNPGSQGEASFFGLEAALEGLEPGYPGGPILNPLGIAKD 211

Query: 42  PGNYEEYKVKEIKN 1
             N  E+K+KEIKN
Sbjct: 212 IKNAPEWKLKEIKN 225


>ref|XP_011397429.1| Chlorophyll a-b binding protein 7, chloroplastic [Auxenochlorella
           protothecoides] gi|675352101|gb|KFM24541.1| Chlorophyll
           a-b binding protein 7, chloroplastic [Auxenochlorella
           protothecoides]
          Length = 691

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
 Frame = -2

Query: 252 WIENNKWFPFWSLLFSQLILTGWVEAKRWADYKNPGSQGDGSFFGLTDDFVAKENGYPGG 73
           ++E N      +L+++ + L+G+VE KR AD++ PGSQ D  F G+  +F  KENGYPGG
Sbjct: 137 YLEQNPNVSLGALIWTTIALSGFVEFKRLADWRKPGSQADQWFLGIQKEFKGKENGYPGG 196

Query: 72  -LFDPFNLA-ADPGNYEEYKVKEIKN 1
             FDP   +      Y+EYK KEIKN
Sbjct: 197 AFFDPLGYSRGSEAKYQEYKWKEIKN 222


>ref|XP_009359490.1| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like
           [Pyrus x bretschneideri]
          Length = 260

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 42/75 (56%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
 Frame = -2

Query: 219 SLLFSQLILTGWVEAKRWADYKNPGSQG-DGSFFGLTDDFVAKENGYPGG-LFDPFNLAA 46
           +LL  Q IL G+VE KR+ D+K PGSQ  DGSFFGL       E GYPGG L +P  LA 
Sbjct: 140 TLLIVQFILMGFVETKRYMDFKTPGSQAKDGSFFGLESALEGLEPGYPGGPLLNPLGLAK 199

Query: 45  DPGNYEEYKVKEIKN 1
           D  N  E+K+KEIKN
Sbjct: 200 DIKNAHEWKLKEIKN 214


>emb|CDP01357.1| unnamed protein product [Coffea canephora]
          Length = 268

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
 Frame = -2

Query: 219 SLLFSQLILTGWVEAKRWADYKNPGSQG-DGSFFGLTDDFVAKENGYPGG-LFDPFNLAA 46
           SLL  QLIL G+VE KR+ D+KNPGSQ  +G+FFGL       E GYPGG L +P  +A 
Sbjct: 147 SLLIVQLILMGFVETKRYMDFKNPGSQAKEGTFFGLETALEGLEPGYPGGPLLNPLGIAK 206

Query: 45  DPGNYEEYKVKEIKN 1
           D  N  ++K+KEIKN
Sbjct: 207 DIKNAHDWKLKEIKN 221


>ref|XP_008393806.1| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Malus
           domestica]
          Length = 260

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 42/75 (56%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
 Frame = -2

Query: 219 SLLFSQLILTGWVEAKRWADYKNPGSQG-DGSFFGLTDDFVAKENGYPGG-LFDPFNLAA 46
           +LL  Q IL G+VE KR+ D+K PGSQ  DGSFFGL       E GYPGG L +P  LA 
Sbjct: 140 TLLIVQFILMGFVETKRYMDFKTPGSQAKDGSFFGLESALEGLEPGYPGGPLLNPLGLAK 199

Query: 45  DPGNYEEYKVKEIKN 1
           D  N  E+K+KEIKN
Sbjct: 200 DIKNAHEWKLKEIKN 214


>gb|AHM26631.1| a-b binding protein [Pyrus x bretschneideri]
          Length = 1217

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 42/75 (56%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
 Frame = -2

Query: 219 SLLFSQLILTGWVEAKRWADYKNPGSQG-DGSFFGLTDDFVAKENGYPGG-LFDPFNLAA 46
           +LL  Q IL G+VE KR+ D+K PGSQ  DGSFFGL       E GYPGG L +P  LA 
Sbjct: 775 TLLIVQFILMGFVETKRYMDFKTPGSQAKDGSFFGLESALEGLEPGYPGGPLLNPLGLAK 834

Query: 45  DPGNYEEYKVKEIKN 1
           D  N  E+K+KEIKN
Sbjct: 835 DIKNAHEWKLKEIKN 849


>emb|CAA50763.1| light harvesting complex I chlorophyll binding protein [Pyrobotrys
           stellata]
          Length = 260

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
 Frame = -2

Query: 246 ENNKWFPFWSLLFSQLILTGWVEAKRWADYKNPGSQ---------GDGSFFGLTDDFVAK 94
           E+  W    SL F+  +L GW E KR  D+  PGSQ         G GS  G+ +  VAK
Sbjct: 118 ESGPW-SMGSLTFTMFLLMGWAEHKRLYDFVKPGSQAVGWAWAPLGLGSITGVEEPLVAK 176

Query: 93  ENGYPGGLFDPFNLAADPGNYEEYKVKEIKN 1
           ENGYPGG+FDPF ++ +   Y+ YK  E+ N
Sbjct: 177 ENGYPGGIFDPFQMSKNEAKYKWYKQSEVTN 207


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