BLASTX nr result

ID: Cinnamomum23_contig00025119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00025119
         (799 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010249089.1| PREDICTED: recQ-mediated genome instability ...    52   8e-08
ref|XP_010249091.1| PREDICTED: recQ-mediated genome instability ...    52   8e-08
ref|XP_010249092.1| PREDICTED: recQ-mediated genome instability ...    52   8e-08
ref|XP_009421055.1| PREDICTED: recQ-mediated genome instability ...    46   1e-06
ref|XP_008779384.1| PREDICTED: recQ-mediated genome instability ...    51   1e-06
ref|XP_008776536.1| PREDICTED: recQ-mediated genome instability ...    51   1e-06
ref|XP_007038042.1| Domain of Uncharacterized protein function, ...    47   2e-06

>ref|XP_010249089.1| PREDICTED: recQ-mediated genome instability protein 1 isoform X1
           [Nelumbo nucifera] gi|719978185|ref|XP_010249090.1|
           PREDICTED: recQ-mediated genome instability protein 1
           isoform X1 [Nelumbo nucifera]
          Length = 614

 Score = 52.4 bits (124), Expect(2) = 8e-08
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = -3

Query: 635 GHSPEDVSATLSSSEKKIMTNRKEIMKRYQLFFGKF*G 522
           GHSPE+V+  LSSS+ KI+ + KE MKRYQLF  KF G
Sbjct: 522 GHSPEEVTTALSSSDNKIVNDMKETMKRYQLFLSKFEG 559



 Score = 32.0 bits (71), Expect(2) = 8e-08
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = -2

Query: 720 LECFSTGVKQLQFKQQSTYE 661
           ++CF TGVK+ QFKQ+S +E
Sbjct: 477 IKCFLTGVKRFQFKQRSAFE 496


>ref|XP_010249091.1| PREDICTED: recQ-mediated genome instability protein 1 isoform X2
           [Nelumbo nucifera]
          Length = 448

 Score = 52.4 bits (124), Expect(2) = 8e-08
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = -3

Query: 635 GHSPEDVSATLSSSEKKIMTNRKEIMKRYQLFFGKF*G 522
           GHSPE+V+  LSSS+ KI+ + KE MKRYQLF  KF G
Sbjct: 356 GHSPEEVTTALSSSDNKIVNDMKETMKRYQLFLSKFEG 393



 Score = 32.0 bits (71), Expect(2) = 8e-08
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = -2

Query: 720 LECFSTGVKQLQFKQQSTYE 661
           ++CF TGVK+ QFKQ+S +E
Sbjct: 311 IKCFLTGVKRFQFKQRSAFE 330


>ref|XP_010249092.1| PREDICTED: recQ-mediated genome instability protein 1 isoform X3
           [Nelumbo nucifera]
          Length = 430

 Score = 52.4 bits (124), Expect(2) = 8e-08
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = -3

Query: 635 GHSPEDVSATLSSSEKKIMTNRKEIMKRYQLFFGKF*G 522
           GHSPE+V+  LSSS+ KI+ + KE MKRYQLF  KF G
Sbjct: 338 GHSPEEVTTALSSSDNKIVNDMKETMKRYQLFLSKFEG 375



 Score = 32.0 bits (71), Expect(2) = 8e-08
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = -2

Query: 720 LECFSTGVKQLQFKQQSTYE 661
           ++CF TGVK+ QFKQ+S +E
Sbjct: 293 IKCFLTGVKRFQFKQRSAFE 312


>ref|XP_009421055.1| PREDICTED: recQ-mediated genome instability protein 1 [Musa
           acuminata subsp. malaccensis]
          Length = 580

 Score = 46.2 bits (108), Expect(2) = 1e-06
 Identities = 20/38 (52%), Positives = 30/38 (78%)
 Frame = -3

Query: 635 GHSPEDVSATLSSSEKKIMTNRKEIMKRYQLFFGKF*G 522
           GHSPE+V++ LSS+EKK +++ K+ +K +QLF  KF G
Sbjct: 489 GHSPEEVTSALSSTEKKTVSDMKDTLKTFQLFLTKFEG 526



 Score = 34.3 bits (77), Expect(2) = 1e-06
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -2

Query: 720 LECFSTGVKQLQFKQQSTYE 661
           ++CF TGVK  QFKQ+STYE
Sbjct: 444 IKCFLTGVKGFQFKQRSTYE 463


>ref|XP_008779384.1| PREDICTED: recQ-mediated genome instability protein 1-like, partial
           [Phoenix dactylifera]
          Length = 245

 Score = 51.2 bits (121), Expect(2) = 1e-06
 Identities = 24/50 (48%), Positives = 36/50 (72%)
 Frame = -3

Query: 677 NKVRMSLDTVVNFGGHSPEDVSATLSSSEKKIMTNRKEIMKRYQLFFGKF 528
           ++V +  + V N  GHSPE+V+  LSSS+KK +T+ +E MK++QLF  KF
Sbjct: 188 SEVLIDHNVVKNGIGHSPEEVTVALSSSDKKTVTDMRETMKKFQLFLAKF 237



 Score = 29.3 bits (64), Expect(2) = 1e-06
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -2

Query: 720 LECFSTGVKQLQFKQQSTYE 661
           ++CF TGVK   FKQ+S++E
Sbjct: 157 IKCFLTGVKGFHFKQRSSFE 176


>ref|XP_008776536.1| PREDICTED: recQ-mediated genome instability protein 1-like, partial
           [Phoenix dactylifera]
          Length = 238

 Score = 51.2 bits (121), Expect(2) = 1e-06
 Identities = 24/50 (48%), Positives = 36/50 (72%)
 Frame = -3

Query: 677 NKVRMSLDTVVNFGGHSPEDVSATLSSSEKKIMTNRKEIMKRYQLFFGKF 528
           ++V +  + V N  GHSPE+V+  LSSS+KK +T+ +E MK++QLF  KF
Sbjct: 188 SEVLIDHNVVKNGIGHSPEEVTVALSSSDKKTVTDMRETMKKFQLFLAKF 237



 Score = 29.3 bits (64), Expect(2) = 1e-06
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -2

Query: 720 LECFSTGVKQLQFKQQSTYE 661
           ++CF TGVK   FKQ+S++E
Sbjct: 157 IKCFLTGVKGFHFKQRSSFE 176


>ref|XP_007038042.1| Domain of Uncharacterized protein function, putative [Theobroma
           cacao] gi|508775287|gb|EOY22543.1| Domain of
           Uncharacterized protein function, putative [Theobroma
           cacao]
          Length = 571

 Score = 46.6 bits (109), Expect(2) = 2e-06
 Identities = 20/38 (52%), Positives = 30/38 (78%)
 Frame = -3

Query: 635 GHSPEDVSATLSSSEKKIMTNRKEIMKRYQLFFGKF*G 522
           GHSP++V+A LSSS+K+I++  KEIM+++Q F   F G
Sbjct: 479 GHSPQEVTAALSSSDKQIVSGMKEIMRQFQTFLAHFEG 516



 Score = 32.7 bits (73), Expect(2) = 2e-06
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = -2

Query: 720 LECFSTGVKQLQFKQQSTYE 661
           ++CF TGVK  Q+KQ++TYE
Sbjct: 434 IKCFLTGVKSFQYKQRTTYE 453


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