BLASTX nr result
ID: Cinnamomum23_contig00024964
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00024964
(339 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009787759.1| PREDICTED: uncharacterized protein LOC104235... 49 6e-16
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 47 4e-14
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 47 1e-13
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 47 1e-13
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 47 1e-13
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 47 3e-13
ref|XP_008370919.1| PREDICTED: uncharacterized protein LOC103434... 50 3e-13
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 45 3e-13
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 45 5e-13
emb|CAN66775.1| hypothetical protein VITISV_035302 [Vitis vinifera] 46 5e-13
ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group] g... 45 6e-13
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 44 1e-12
emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group] 45 1e-12
emb|CAD40782.2| OSJNBb0012E08.6 [Oryza sativa Japonica Group] 44 1e-12
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 44 2e-12
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 42 2e-12
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 43 2e-12
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 42 2e-12
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc... 44 3e-12
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 47 4e-12
>ref|XP_009787759.1| PREDICTED: uncharacterized protein LOC104235647 [Nicotiana
sylvestris]
Length = 985
Score = 49.3 bits (116), Expect(3) = 6e-16
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = -1
Query: 339 PDISQAVSVLNRYMDKPRKAHWQVVKLILCYLRG 238
PDI+Q+VSV++RYM P K HW+ VK IL YL+G
Sbjct: 467 PDIAQSVSVVSRYMSNPGKRHWEAVKWILRYLKG 500
Score = 44.3 bits (103), Expect(3) = 6e-16
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = -2
Query: 134 KKILTSYVFIFSSRAIGWKATMQSIAALSTTEAAYRAS 21
++ T Y+F A+ WK+T+QSI ALSTTEA Y A+
Sbjct: 532 RRSTTGYIFTLVGSAVSWKSTLQSIVALSTTEAEYMAA 569
Score = 36.6 bits (83), Expect(3) = 6e-16
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = -3
Query: 202 RHSNTFGSVIGYVDSDFAGDLD*RR 128
R S T S++GYVDSD+AGDLD RR
Sbjct: 509 RKSGTGISILGYVDSDYAGDLDRRR 533
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 47.4 bits (111), Expect(3) = 4e-14
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = -2
Query: 134 KKILTSYVFIFSSRAIGWKATMQSIAALSTTEAAYRA 24
++ LT YVF S A+ W+AT+QS+ ALSTTEA Y A
Sbjct: 1196 RRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMA 1232
Score = 45.4 bits (106), Expect(3) = 4e-14
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = -1
Query: 339 PDISQAVSVLNRYMDKPRKAHWQVVKLILCYLRG 238
PD+S A+S+++RYM P K HW+VV+ I YLRG
Sbjct: 1133 PDLSYAMSLVSRYMSNPGKEHWRVVQWIFRYLRG 1166
Score = 30.8 bits (68), Expect(3) = 4e-14
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 202 RHSNTFGSVIGYVDSDFAGDLD*RR 128
+ T +IGYVDSD+A DLD RR
Sbjct: 1173 KFGRTDKGLIGYVDSDYAADLDRRR 1197
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 47.4 bits (111), Expect(3) = 1e-13
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = -2
Query: 134 KKILTSYVFIFSSRAIGWKATMQSIAALSTTEAAYRA 24
++ LT YVF S A+ W+AT+QS+ ALSTTEA Y A
Sbjct: 1196 RRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMA 1232
Score = 43.9 bits (102), Expect(3) = 1e-13
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -1
Query: 339 PDISQAVSVLNRYMDKPRKAHWQVVKLILCYLRG 238
PD+S A+S+++RYM P K HW+ V+ I YLRG
Sbjct: 1133 PDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRG 1166
Score = 30.8 bits (68), Expect(3) = 1e-13
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 202 RHSNTFGSVIGYVDSDFAGDLD*RR 128
+ T +IGYVDSD+A DLD RR
Sbjct: 1173 KFGRTDKGLIGYVDSDYAADLDRRR 1197
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 47.4 bits (111), Expect(3) = 1e-13
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = -2
Query: 134 KKILTSYVFIFSSRAIGWKATMQSIAALSTTEAAYRA 24
++ LT YVF S A+ W+AT+QS+ ALSTTEA Y A
Sbjct: 1196 RRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMA 1232
Score = 43.9 bits (102), Expect(3) = 1e-13
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -1
Query: 339 PDISQAVSVLNRYMDKPRKAHWQVVKLILCYLRG 238
PD+S A+S+++RYM P K HW+ V+ I YLRG
Sbjct: 1133 PDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRG 1166
Score = 30.8 bits (68), Expect(3) = 1e-13
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 202 RHSNTFGSVIGYVDSDFAGDLD*RR 128
+ T +IGYVDSD+A DLD RR
Sbjct: 1173 KFGRTDKGLIGYVDSDYAADLDRRR 1197
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 46.6 bits (109), Expect(3) = 1e-13
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -1
Query: 339 PDISQAVSVLNRYMDKPRKAHWQVVKLILCYLRG 238
PD+S A+SV+NRYM P K HW+ V+ I YLRG
Sbjct: 1104 PDLSHALSVVNRYMANPGKEHWKAVQWIFRYLRG 1137
Score = 42.0 bits (97), Expect(3) = 1e-13
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = -2
Query: 134 KKILTSYVFIFSSRAIGWKATMQSIAALSTTEAAYRA 24
++ +T YVF A+ WKA++Q+ ALSTTEA Y A
Sbjct: 1167 RRSITGYVFTIGGCAVSWKASLQATVALSTTEAEYMA 1203
Score = 33.5 bits (75), Expect(3) = 1e-13
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 178 VIGYVDSDFAGDLD*RR 128
++GYVDSDFAGDLD RR
Sbjct: 1152 LVGYVDSDFAGDLDRRR 1168
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 47.4 bits (111), Expect(3) = 3e-13
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = -2
Query: 134 KKILTSYVFIFSSRAIGWKATMQSIAALSTTEAAYRA 24
++ LT YVF S A+ W+AT+QS+ ALSTTEA Y A
Sbjct: 1198 RRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMA 1234
Score = 42.7 bits (99), Expect(3) = 3e-13
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = -1
Query: 339 PDISQAVSVLNRYMDKPRKAHWQVVKLILCYLRG 238
PD+S A+S+++RYM P K HW+ ++ I YLRG
Sbjct: 1135 PDLSYAMSLVSRYMSNPGKEHWRALQWIFRYLRG 1168
Score = 30.8 bits (68), Expect(3) = 3e-13
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 202 RHSNTFGSVIGYVDSDFAGDLD*RR 128
+ T +IGYVDSD+A DLD RR
Sbjct: 1175 KFGRTDKGLIGYVDSDYAADLDRRR 1199
>ref|XP_008370919.1| PREDICTED: uncharacterized protein LOC103434364 [Malus domestica]
Length = 1100
Score = 50.1 bits (118), Expect(3) = 3e-13
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = -1
Query: 339 PDISQAVSVLNRYMDKPRKAHWQVVKLILCYLRG 238
PDISQAVS+++RYM P K HWQ VK IL Y+ G
Sbjct: 269 PDISQAVSIVSRYMHNPGKGHWQAVKWILRYILG 302
Score = 37.4 bits (85), Expect(3) = 3e-13
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -2
Query: 134 KKILTSYVFIFSSRAIGWKATMQSIAALSTTEAAYRASE 18
++ T +VF + + W++ +QS ALSTTEA Y A++
Sbjct: 335 RRSTTGFVFTIAGGPVSWRSILQSTVALSTTEAEYMANQ 373
Score = 33.5 bits (75), Expect(3) = 3e-13
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -3
Query: 214 IVYDRHSNTFGSVIGYVDSDFAGDLD*RR 128
+++ R T V+GYVD D+AGDLD RR
Sbjct: 308 LLFQRDKFTGQCVVGYVDFDYAGDLDKRR 336
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 44.7 bits (104), Expect(3) = 3e-13
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = -1
Query: 339 PDISQAVSVLNRYMDKPRKAHWQVVKLILCYLRG 238
PD+S A+SV++RYM P K HW+ V+ I YLRG
Sbjct: 1041 PDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRG 1074
Score = 42.4 bits (98), Expect(3) = 3e-13
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = -2
Query: 134 KKILTSYVFIFSSRAIGWKATMQSIAALSTTEAAYRA 24
++ LT YVF A+ WKA++Q+ ALSTTEA Y A
Sbjct: 1104 RRSLTGYVFTVGGCAVSWKASLQATVALSTTEAEYMA 1140
Score = 33.5 bits (75), Expect(3) = 3e-13
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 178 VIGYVDSDFAGDLD*RR 128
++GYVDSDFAGDLD RR
Sbjct: 1089 LVGYVDSDFAGDLDRRR 1105
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 45.1 bits (105), Expect(3) = 5e-13
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = -2
Query: 134 KKILTSYVFIFSSRAIGWKATMQSIAALSTTEAAYRA 24
++ LT YVF SS A+ WKAT+Q + A STTEA Y A
Sbjct: 868 RRSLTGYVFTISSCAMSWKATLQPVVAQSTTEAEYMA 904
Score = 43.5 bits (101), Expect(3) = 5e-13
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -1
Query: 339 PDISQAVSVLNRYMDKPRKAHWQVVKLILCYLRG 238
PD+S A+S+++RYM P K HW+ V+ I YLRG
Sbjct: 805 PDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRG 838
Score = 31.6 bits (70), Expect(3) = 5e-13
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 202 RHSNTFGSVIGYVDSDFAGDLD*RR 128
+ T ++GYVDSDFA DLD RR
Sbjct: 845 KFGRTDKGLVGYVDSDFAADLDKRR 869
>emb|CAN66775.1| hypothetical protein VITISV_035302 [Vitis vinifera]
Length = 734
Score = 46.2 bits (108), Expect(3) = 5e-13
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = -1
Query: 330 SQAVSVLNRYMDKPRKAHWQVVKLILCYLRG 238
S AVSV++RYMD P K HWQ VK IL +LRG
Sbjct: 606 SHAVSVVSRYMDHPEKIHWQAVKWILRHLRG 636
Score = 38.5 bits (88), Expect(3) = 5e-13
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = -2
Query: 134 KKILTSYVFIFSSRAIGWKATMQSIAALSTTEA 36
++ LT YVF I WKAT+QS ALST EA
Sbjct: 669 RRSLTRYVFTLCGNVISWKATLQSTIALSTIEA 701
Score = 35.4 bits (80), Expect(3) = 5e-13
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -3
Query: 214 IVYDRHSNTFGSVIGYVDSDFAGDLD*RR 128
+VYD++ + ++GYVD D+ GDLD RR
Sbjct: 642 LVYDKNFDISRGIVGYVDFDYVGDLDRRR 670
>ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group]
gi|255676990|dbj|BAH93480.1| Os06g0316600 [Oryza sativa
Japonica Group]
Length = 759
Score = 44.7 bits (104), Expect(3) = 6e-13
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -2
Query: 134 KKILTSYVFIFSSRAIGWKATMQSIAALSTTEAAYRA 24
++ LT YVF S A+ WKAT+Q I A STTEA Y A
Sbjct: 622 RRSLTGYVFTIGSCAVSWKATLQPIVAQSTTEAEYMA 658
Score = 43.5 bits (101), Expect(3) = 6e-13
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -1
Query: 339 PDISQAVSVLNRYMDKPRKAHWQVVKLILCYLRG 238
PD+S A+S+++RYM P K HW+ V+ I YLRG
Sbjct: 559 PDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRG 592
Score = 31.6 bits (70), Expect(3) = 6e-13
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 202 RHSNTFGSVIGYVDSDFAGDLD*RR 128
+ T ++GYVDSDFA DLD RR
Sbjct: 599 KFGRTDKGLVGYVDSDFAADLDKRR 623
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 44.3 bits (103), Expect(3) = 1e-12
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -2
Query: 134 KKILTSYVFIFSSRAIGWKATMQSIAALSTTEAAYRA 24
++ LT YVF S A+ WKAT+Q + A STTEA Y A
Sbjct: 1185 RRSLTGYVFTIGSCAVSWKATLQPVVAQSTTEAEYMA 1221
Score = 43.5 bits (101), Expect(3) = 1e-12
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -1
Query: 339 PDISQAVSVLNRYMDKPRKAHWQVVKLILCYLRG 238
PD+S A+S+++RYM P K HW+ V+ I YLRG
Sbjct: 1122 PDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRG 1155
Score = 31.2 bits (69), Expect(3) = 1e-12
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -3
Query: 178 VIGYVDSDFAGDLD*RR 128
++GYVDSDFA DLD RR
Sbjct: 1170 LVGYVDSDFAADLDKRR 1186
>emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group]
Length = 293
Score = 44.7 bits (104), Expect(3) = 1e-12
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -2
Query: 134 KKILTSYVFIFSSRAIGWKATMQSIAALSTTEAAYRA 24
++ LT YVF S A+ WKAT+Q I A STTEA Y A
Sbjct: 156 RRSLTGYVFTIGSCAVSWKATLQPIVAQSTTEAEYMA 192
Score = 42.7 bits (99), Expect(3) = 1e-12
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = -1
Query: 339 PDISQAVSVLNRYMDKPRKAHWQVVKLILCYLRG 238
PD+S A+S+++RYM P K HW+ + I YLRG
Sbjct: 93 PDLSHAMSLVSRYMTNPGKEHWKAIHWIFRYLRG 126
Score = 31.6 bits (70), Expect(3) = 1e-12
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 202 RHSNTFGSVIGYVDSDFAGDLD*RR 128
+ T ++GYVDSDFA DLD RR
Sbjct: 133 KFGRTDKGLVGYVDSDFAADLDKRR 157
>emb|CAD40782.2| OSJNBb0012E08.6 [Oryza sativa Japonica Group]
Length = 375
Score = 43.5 bits (101), Expect(3) = 1e-12
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -1
Query: 339 PDISQAVSVLNRYMDKPRKAHWQVVKLILCYLRG 238
PD+S A+S+++RYM P K HW+ V+ I YLRG
Sbjct: 189 PDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRG 222
Score = 43.5 bits (101), Expect(3) = 1e-12
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -2
Query: 134 KKILTSYVFIFSSRAIGWKATMQSIAALSTTEAAYRA 24
++ LT YVF S A+ WKAT+Q + A STTEA Y A
Sbjct: 252 RRSLTDYVFTIGSCAMSWKATLQPVVAQSTTEAEYMA 288
Score = 31.6 bits (70), Expect(3) = 1e-12
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 202 RHSNTFGSVIGYVDSDFAGDLD*RR 128
+ T ++GYVDSDFA DLD RR
Sbjct: 229 KFGRTDKGLVGYVDSDFAADLDKRR 253
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 43.5 bits (101), Expect(3) = 2e-12
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = -1
Query: 336 DISQAVSVLNRYMDKPRKAHWQVVKLILCYLRG 238
D+S A+SV++RYM P K HW+VV+ I YLRG
Sbjct: 1012 DLSHALSVVSRYMANPGKEHWKVVQWIFKYLRG 1044
Score = 41.2 bits (95), Expect(3) = 2e-12
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = -2
Query: 134 KKILTSYVFIFSSRAIGWKATMQSIAALSTTEAAYRA 24
++ LT YVF A+ WKA++Q+ ALSTTE Y A
Sbjct: 1074 RRSLTGYVFTIGGCAVSWKASLQATVALSTTEVEYMA 1110
Score = 33.5 bits (75), Expect(3) = 2e-12
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 178 VIGYVDSDFAGDLD*RR 128
++GYVDSDFAGDLD RR
Sbjct: 1059 LVGYVDSDFAGDLDRRR 1075
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 42.4 bits (98), Expect(3) = 2e-12
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = -1
Query: 339 PDISQAVSVLNRYMDKPRKAHWQVVKLILCYLRG 238
PD+S A+SV++RYM P K HW+ V+ I YL G
Sbjct: 1038 PDLSHALSVVSRYMVNPGKEHWKAVQWIFRYLHG 1071
Score = 42.0 bits (97), Expect(3) = 2e-12
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = -2
Query: 134 KKILTSYVFIFSSRAIGWKATMQSIAALSTTEAAYRA 24
++ LT YVF A+ WKA++Q+ ALSTTEA Y A
Sbjct: 1101 RRSLTGYVFTIGGCAVSWKASLQATVALSTTEAEYIA 1137
Score = 33.5 bits (75), Expect(3) = 2e-12
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 178 VIGYVDSDFAGDLD*RR 128
++GYVDSDFAGDLD RR
Sbjct: 1086 LVGYVDSDFAGDLDRRR 1102
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 42.7 bits (99), Expect(3) = 2e-12
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = -2
Query: 134 KKILTSYVFIFSSRAIGWKATMQSIAALSTTEAAYRA 24
++ LT YVF A+ WKA++Q+ ALSTTEA Y A
Sbjct: 1044 RRSLTGYVFTIGGCAVSWKASLQATVALSTTEAEYMA 1080
Score = 41.6 bits (96), Expect(3) = 2e-12
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = -1
Query: 339 PDISQAVSVLNRYMDKPRKAHWQVVKLILCYLRG 238
PD+S A+SV++RYM P K HW+ V+ I YL G
Sbjct: 981 PDLSHALSVVSRYMANPGKEHWKDVQWIFRYLHG 1014
Score = 33.5 bits (75), Expect(3) = 2e-12
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 178 VIGYVDSDFAGDLD*RR 128
++GYVDSDFAGDLD RR
Sbjct: 1029 LVGYVDSDFAGDLDRRR 1045
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 42.4 bits (98), Expect(3) = 2e-12
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = -1
Query: 339 PDISQAVSVLNRYMDKPRKAHWQVVKLILCYLRG 238
PD+S A+SV++RYM P K HW+ V+ I YL G
Sbjct: 870 PDLSHALSVVSRYMVNPGKEHWKAVQWIFRYLHG 903
Score = 42.0 bits (97), Expect(3) = 2e-12
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = -2
Query: 134 KKILTSYVFIFSSRAIGWKATMQSIAALSTTEAAYRA 24
++ LT YVF A+ WKA++Q+ ALSTTEA Y A
Sbjct: 933 RRSLTGYVFTIGGCAVSWKASLQATVALSTTEAEYIA 969
Score = 33.5 bits (75), Expect(3) = 2e-12
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 178 VIGYVDSDFAGDLD*RR 128
++GYVDSDFAGDLD RR
Sbjct: 918 LVGYVDSDFAGDLDRRR 934
>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1156
Score = 43.5 bits (101), Expect(3) = 3e-12
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -2
Query: 134 KKILTSYVFIFSSRAIGWKATMQSIAALSTTEAAYRA 24
++ LT YVF S A+ WKAT+Q + A STTEA Y A
Sbjct: 1035 RRSLTGYVFTIGSCAMSWKATLQPVVAQSTTEAEYMA 1071
Score = 42.4 bits (98), Expect(3) = 3e-12
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = -1
Query: 339 PDISQAVSVLNRYMDKPRKAHWQVVKLILCYLRG 238
PD+S A+S+++RYM P K HW+ V+ I YL+G
Sbjct: 972 PDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLKG 1005
Score = 31.6 bits (70), Expect(3) = 3e-12
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 202 RHSNTFGSVIGYVDSDFAGDLD*RR 128
+ T ++GYVDSDFA DLD RR
Sbjct: 1012 KFGRTDKGLVGYVDSDFAADLDKRR 1036
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 47.0 bits (110), Expect(3) = 4e-12
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = -1
Query: 339 PDISQAVSVLNRYMDKPRKAHWQVVKLILCYLRG 238
PD++ AVSV++R+M +P K HWQ VK I YLRG
Sbjct: 1221 PDLAHAVSVVSRFMTQPGKEHWQAVKRIFRYLRG 1254
Score = 40.8 bits (94), Expect(3) = 4e-12
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -2
Query: 134 KKILTSYVFIFSSRAIGWKATMQSIAALSTTEAAYRA 24
++ +T YV+ + WKAT+QS LSTTEA Y A
Sbjct: 1285 RRSMTGYVYTLGGSVVSWKATLQSSVTLSTTEAEYMA 1321
Score = 28.9 bits (63), Expect(3) = 4e-12
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -3
Query: 178 VIGYVDSDFAGDLD*RR 128
V GY DSD+AGD+D RR
Sbjct: 1270 VTGYSDSDYAGDIDTRR 1286