BLASTX nr result
ID: Cinnamomum23_contig00024848
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00024848
(412 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS68745.1| hypothetical protein M569_06026, partial [Genlise... 64 5e-08
ref|XP_010264776.1| PREDICTED: pentatricopeptide repeat-containi... 61 3e-07
emb|CDP17497.1| unnamed protein product [Coffea canephora] 61 3e-07
ref|XP_002512332.1| pentatricopeptide repeat-containing protein,... 59 2e-06
ref|XP_011084887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 58 2e-06
ref|XP_004308947.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
ref|XP_008233785.1| PREDICTED: pentatricopeptide repeat-containi... 58 3e-06
ref|XP_010505747.1| PREDICTED: pentatricopeptide repeat-containi... 57 5e-06
ref|XP_010034146.1| PREDICTED: pentatricopeptide repeat-containi... 57 5e-06
ref|XP_009799197.1| PREDICTED: pentatricopeptide repeat-containi... 57 6e-06
>gb|EPS68745.1| hypothetical protein M569_06026, partial [Genlisea aurea]
Length = 269
Score = 63.5 bits (153), Expect = 5e-08
Identities = 27/46 (58%), Positives = 37/46 (80%)
Frame = -1
Query: 142 YDHLINEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFVADDPTSL 5
YD LINEAGR+RDF+ V+ L+S R+ G FNT NTFKF+A +P+++
Sbjct: 1 YDELINEAGRNRDFAAVRDLISRRLAAGCFNTNNTFKFIAAEPSAV 46
>ref|XP_010264776.1| PREDICTED: pentatricopeptide repeat-containing protein At3g56030
[Nelumbo nucifera]
Length = 342
Score = 61.2 bits (147), Expect = 3e-07
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 3/57 (5%)
Frame = -1
Query: 163 DQVTSASYDHLINEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFVA---DDPTSLL 2
D+ TSA YD L+N AG SRDF+T+ LL++R + G FNTTNTFKF+ DD + L+
Sbjct: 45 DKPTSAHYDQLVNIAGHSRDFTTLHYLLNKRTKDGCFNTTNTFKFITGAEDDLSDLI 101
>emb|CDP17497.1| unnamed protein product [Coffea canephora]
Length = 322
Score = 60.8 bits (146), Expect = 3e-07
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = -1
Query: 163 DQVTSASYDHLINEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFVADD 17
D +SA+YD+LIN+AGR RDF TV+ LL +R + G F T NTFKF++ D
Sbjct: 33 DSPSSANYDYLINKAGRDRDFGTVQHLLMKRTRDGCFYTNNTFKFISTD 81
>ref|XP_002512332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548293|gb|EEF49784.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 619
Score = 58.5 bits (140), Expect = 2e-06
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = -1
Query: 163 DQVTSASYDHLINEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFVADDPTSL 5
D+ T+A YD L+N AG RDF T+ LL++R++ FNTTNTFKF+ + SL
Sbjct: 323 DKPTAAYYDGLVNAAGHERDFKTLHHLLNKRVRDHCFNTTNTFKFITNTDNSL 375
>ref|XP_011084887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g40240, mitochondrial-like [Sesamum indicum]
Length = 354
Score = 58.2 bits (139), Expect = 2e-06
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = -1
Query: 148 ASYDHLINEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFVADDPTSL 5
A +D LIN AGR RDF+ V+ LLS R+ G NT NTF+F+A DP+ L
Sbjct: 56 AEFDDLINAAGRKRDFAAVRHLLSRRMSDGLLNTNNTFQFIAIDPSVL 103
>ref|XP_004308947.1| PREDICTED: pentatricopeptide repeat-containing protein At3g56030
[Fragaria vesca subsp. vesca]
Length = 331
Score = 58.2 bits (139), Expect = 2e-06
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = -1
Query: 163 DQVTSASYDHLINEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFVADDPTSL 5
D+ TSA YD L+N AG SRDF + LL++R++ FNT NTFKF+ + SL
Sbjct: 34 DEPTSAHYDLLVNAAGESRDFDNLHHLLTKRVKDHCFNTVNTFKFITNSEASL 86
>ref|XP_008233785.1| PREDICTED: pentatricopeptide repeat-containing protein At3g56030
[Prunus mume]
Length = 328
Score = 57.8 bits (138), Expect = 3e-06
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = -1
Query: 163 DQVTSASYDHLINEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFVADDPTSL 5
D TSA YD +N AGRSRDF ++ LL++R++ FNTTNTFKF+ SL
Sbjct: 37 DIPTSAYYDDQVNAAGRSRDFDGLRHLLNKRVKDHCFNTTNTFKFITSTDASL 89
>ref|XP_010505747.1| PREDICTED: pentatricopeptide repeat-containing protein At2g40240,
mitochondrial-like [Camelina sativa]
Length = 412
Score = 57.0 bits (136), Expect = 5e-06
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = -1
Query: 307 KRLKS-NPTMSLFLRSNPKKSLFPSYQLLSLPLRFLXXXXXXXXXXXXSDQVTSASYDHL 131
KRL++ N TMSL R K+S+ SYQ+++ + +D L
Sbjct: 73 KRLRTQNMTMSLLRRRLVKQSVNSSYQIIA--------DRSFSTVEITPVPRRTNEFDKL 124
Query: 130 INEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFVAD 20
INEAG S DF TV+ LL+ RI G FNT++TFKF+ +
Sbjct: 125 INEAGGSGDFETVRRLLTNRIVLGSFNTSDTFKFLTN 161
>ref|XP_010034146.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56030-like [Eucalyptus grandis]
Length = 342
Score = 57.0 bits (136), Expect = 5e-06
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = -1
Query: 163 DQVTSASYDHLINEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFVADDPTSL 5
D TSA YD LIN AGR DF+ V+ LL +R++ G FNT +TF+F+ TSL
Sbjct: 37 DAPTSAYYDDLINAAGRRGDFAAVRHLLGKRVRDGCFNTGDTFRFLTQTETSL 89
>ref|XP_009799197.1| PREDICTED: pentatricopeptide repeat-containing protein At3g56030
[Nicotiana sylvestris]
Length = 326
Score = 56.6 bits (135), Expect = 6e-06
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = -1
Query: 142 YDHLINEAGRSRDFSTVKSLLSERIQTGQFNTTNTFKFVADDPTSLL 2
YD LINEAGR DF+T+ LL++R+ G FNT NTFKFV+ S+L
Sbjct: 41 YDALINEAGRQGDFATLHHLLNKRVSDGFFNTNNTFKFVSTTNLSIL 87