BLASTX nr result

ID: Cinnamomum23_contig00024680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00024680
         (309 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518045.1| ubiquitin-protein ligase, putative [Ricinus ...    56   8e-06

>ref|XP_002518045.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223542641|gb|EEF44178.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 406

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 35/97 (36%), Positives = 51/97 (52%)
 Frame = -1

Query: 300 KMNPLNPTSTSRLWLVELKTKRTRRKRGHIKTRRGAAEEQQLYISLLSQDMIMEILSRLP 121
           K    NP   +    +     RT+R    ++T+  A  E    IS L +D+I+EILSR+P
Sbjct: 11  KQGNTNPQKLNSFLSLRGVAGRTQR----LRTKSSAQAEPDTSISTLPEDLIVEILSRVP 66

Query: 120 IHSLFQCTLVSKAWHDIIIHNPTFLSMQHNRALENQN 10
           +  L +   VSK+W+  II +P F  +Q  RA EN N
Sbjct: 67  VKPLLRFKCVSKSWNS-IISDPRFAKLQLKRAKENSN 102


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