BLASTX nr result
ID: Cinnamomum23_contig00024577
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00024577
(806 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KIZ03220.1| ribulose-bisphosphate carboxylase small chain [Mo... 210 7e-52
gb|KIZ01259.1| ribulose-bisphosphate carboxylase small chain [Mo... 210 7e-52
sp|P26985.2|RBS_BATOE RecName: Full=Ribulose bisphosphate carbox... 207 6e-51
prf||1803224A RuBisCO:SUBUNIT=small:ISOTYPE=1 207 8e-51
sp|P16134.1|RBS1_ACEAT RecName: Full=Ribulose bisphosphate carbo... 206 1e-50
sp|P16135.1|RBS2_ACEAT RecName: Full=Ribulose bisphosphate carbo... 206 1e-50
sp|P16131.1|RBS3_ACEPE RecName: Full=Ribulose bisphosphate carbo... 206 2e-50
sp|P16136.1|RBS3_ACEAT RecName: Full=Ribulose bisphosphate carbo... 205 2e-50
sp|P16132.1|RBS4_ACEPE RecName: Full=Ribulose bisphosphate carbo... 205 3e-50
sp|P16138.1|RBS5_ACEAT RecName: Full=Ribulose bisphosphate carbo... 204 4e-50
gb|ACQ99367.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 204 4e-50
sp|P16137.1|RBS4_ACEAT RecName: Full=Ribulose bisphosphate carbo... 204 5e-50
sp|P16133.1|RBS5_ACEPE RecName: Full=Ribulose bisphosphate carbo... 204 5e-50
sp|Q38693.1|RBS7_ACEPE RecName: Full=Ribulose bisphosphate carbo... 202 2e-49
ref|XP_011395737.1| Ribulose bisphosphate carboxylase small chai... 202 2e-49
gb|ACF16408.1| chloroplast ribulose 1,5-bisphosphate carboxylase... 202 2e-49
ref|XP_002955684.1| ribulose-bisphosphate carboxylase small subu... 202 2e-49
ref|XP_002955677.1| ribulose-1,5-bisphosphate carboxylase/oxygen... 202 3e-49
gb|AGH30308.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 202 3e-49
sp|Q38692.1|RBS6_ACEPE RecName: Full=Ribulose bisphosphate carbo... 201 3e-49
>gb|KIZ03220.1| ribulose-bisphosphate carboxylase small chain [Monoraphidium
neglectum]
Length = 166
Score = 210 bits (535), Expect = 7e-52
Identities = 92/144 (63%), Positives = 111/144 (77%)
Frame = -3
Query: 636 ARNMQVWHPRDNKFFETLSFLPPLTDDQIAKQVDYIVSNNWTPALEFTDAEDAYVASTNT 457
A M VW P +NKFFET S+LPPL D+QIA+QVDYI++N WTP LEF + AY ++TN
Sbjct: 22 ANKMMVWQPVNNKFFETFSYLPPLNDNQIARQVDYIINNGWTPCLEFAAPDSAYTSNTNV 81
Query: 456 VRFHDNGPCNYYDNRYWTMWRLPMFGCNDAGQVLGEVQACTKAFPDAYIRLVAFDAVRQV 277
VR + CNYYDNRYWTMW+LPMFGC D QVL E+ ACTKA PDAYIR+ AFDA RQV
Sbjct: 82 VRIQNGATCNYYDNRYWTMWKLPMFGCTDPSQVLKEIAACTKACPDAYIRMAAFDASRQV 141
Query: 276 QITGFLVHRPPSAKDFRAPEARSV 205
Q+T LVHRP +AKD++AP+ R +
Sbjct: 142 QVTSMLVHRPTTAKDWKAPDRRQL 165
>gb|KIZ01259.1| ribulose-bisphosphate carboxylase small chain [Monoraphidium
neglectum]
Length = 165
Score = 210 bits (535), Expect = 7e-52
Identities = 92/144 (63%), Positives = 111/144 (77%)
Frame = -3
Query: 636 ARNMQVWHPRDNKFFETLSFLPPLTDDQIAKQVDYIVSNNWTPALEFTDAEDAYVASTNT 457
A M VW P +NKFFET S+LPPL D+QIA+QVDYI++N WTP LEF + AY ++TN
Sbjct: 21 ANKMMVWQPVNNKFFETFSYLPPLNDNQIARQVDYIINNGWTPCLEFAAPDSAYTSNTNV 80
Query: 456 VRFHDNGPCNYYDNRYWTMWRLPMFGCNDAGQVLGEVQACTKAFPDAYIRLVAFDAVRQV 277
VR + CNYYDNRYWTMW+LPMFGC D QVL E+ ACTKA PDAYIR+ AFDA RQV
Sbjct: 81 VRIQNGATCNYYDNRYWTMWKLPMFGCTDPSQVLKEIAACTKACPDAYIRMAAFDASRQV 140
Query: 276 QITGFLVHRPPSAKDFRAPEARSV 205
Q+T LVHRP +AKD++AP+ R +
Sbjct: 141 QVTSMLVHRPTTAKDWKAPDRRQL 164
>sp|P26985.2|RBS_BATOE RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor [Batophora oerstedii]
gi|2654261|emb|CAA40538.1| ribulose bisphosphate
carboxylase small subunit [Batophora oerstedii]
Length = 175
Score = 207 bits (527), Expect = 6e-51
Identities = 99/144 (68%), Positives = 109/144 (75%)
Frame = -3
Query: 636 ARNMQVWHPRDNKFFETLSFLPPLTDDQIAKQVDYIVSNNWTPALEFTDAEDAYVASTNT 457
+R M VW P +NKFFET S+LPPLTDDQI KQVDYI+ NNWTP LEF ++ AYV NT
Sbjct: 33 SRAMMVWEPFNNKFFETFSYLPPLTDDQITKQVDYILRNNWTPCLEFAGSDQAYVTHDNT 92
Query: 456 VRFHDNGPCNYYDNRYWTMWRLPMFGCNDAGQVLGEVQACTKAFPDAYIRLVAFDAVRQV 277
VR D Y DNRYWTMW+LPMFGC D QVL E+ ACTKAFPDAYIRLV FDA RQV
Sbjct: 93 VRMGDCAS-TYQDNRYWTMWKLPMFGCIDGSQVLTEISACTKAFPDAYIRLVCFDANRQV 151
Query: 276 QITGFLVHRPPSAKDFRAPEARSV 205
QI+GFLVHRP SA D+R P R V
Sbjct: 152 QISGFLVHRPESATDYRLPADRQV 175
>prf||1803224A RuBisCO:SUBUNIT=small:ISOTYPE=1
Length = 175
Score = 207 bits (526), Expect = 8e-51
Identities = 99/144 (68%), Positives = 109/144 (75%)
Frame = -3
Query: 636 ARNMQVWHPRDNKFFETLSFLPPLTDDQIAKQVDYIVSNNWTPALEFTDAEDAYVASTNT 457
+R M VW P +NKFFET S+LPPLTDDQI KQVDYI+ NNWTP LEF ++ AYV NT
Sbjct: 33 SRAMMVWXPFNNKFFETFSYLPPLTDDQITKQVDYILRNNWTPCLEFAGSDQAYVTHDNT 92
Query: 456 VRFHDNGPCNYYDNRYWTMWRLPMFGCNDAGQVLGEVQACTKAFPDAYIRLVAFDAVRQV 277
VR D Y DNRYWTMW+LPMFGC D QVL E+ ACTKAFPDAYIRLV FDA RQV
Sbjct: 93 VRMGDCAS-TYQDNRYWTMWKLPMFGCIDGSQVLTEISACTKAFPDAYIRLVCFDANRQV 151
Query: 276 QITGFLVHRPPSAKDFRAPEARSV 205
QI+GFLVHRP SA D+R P R V
Sbjct: 152 QISGFLVHRPESATDYRLPADRQV 175
>sp|P16134.1|RBS1_ACEAT RecName: Full=Ribulose bisphosphate carboxylase small chain 1,
chloroplastic; Short=RuBisCO small subunit 1; Flags:
Precursor [Acetabularia acetabulum]
gi|732551|emb|CAA36108.1| ribulose bisphosphate
carboxylase, small subunit precursor [Acetabularia
acetabulum]
Length = 182
Score = 206 bits (524), Expect = 1e-50
Identities = 97/145 (66%), Positives = 111/145 (76%), Gaps = 2/145 (1%)
Frame = -3
Query: 633 RNMQVWHPRDNKFFETLSFLPPLTDDQIAKQVDYIVSNNWTPALEFTDAEDAYVASTNTV 454
R M VW P +NK FET SFLPPLTD+QI+KQVDYI++N+WTP LEF ++ AY + N +
Sbjct: 41 REMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCI 100
Query: 453 RFHDNGPC--NYYDNRYWTMWRLPMFGCNDAGQVLGEVQACTKAFPDAYIRLVAFDAVRQ 280
R GP Y DNRYWTMW+LPMFGC D QVL E+QACTKAFPDAYIRLV FDA RQ
Sbjct: 101 RM---GPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQ 157
Query: 279 VQITGFLVHRPPSAKDFRAPEARSV 205
VQI+GFLVHRPPSA D+R P R V
Sbjct: 158 VQISGFLVHRPPSATDYRLPADRQV 182
>sp|P16135.1|RBS2_ACEAT RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
chloroplastic; Short=RuBisCO small subunit 2; Flags:
Precursor, partial [Acetabularia acetabulum]
gi|732552|emb|CAA36109.1| ribulose bisphosphate
carboxylase, small subunit precursor [Acetabularia
acetabulum]
Length = 173
Score = 206 bits (524), Expect = 1e-50
Identities = 97/145 (66%), Positives = 111/145 (76%), Gaps = 2/145 (1%)
Frame = -3
Query: 633 RNMQVWHPRDNKFFETLSFLPPLTDDQIAKQVDYIVSNNWTPALEFTDAEDAYVASTNTV 454
R M VW P +NK FET SFLPPLTD+QI+KQVDYI++N+WTP LEF ++ AY + N +
Sbjct: 32 REMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCI 91
Query: 453 RFHDNGPC--NYYDNRYWTMWRLPMFGCNDAGQVLGEVQACTKAFPDAYIRLVAFDAVRQ 280
R GP Y DNRYWTMW+LPMFGC D QVL E+QACTKAFPDAYIRLV FDA RQ
Sbjct: 92 RM---GPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQ 148
Query: 279 VQITGFLVHRPPSAKDFRAPEARSV 205
VQI+GFLVHRPPSA D+R P R V
Sbjct: 149 VQISGFLVHRPPSATDYRLPADRQV 173
>sp|P16131.1|RBS3_ACEPE RecName: Full=Ribulose bisphosphate carboxylase small chain 3,
chloroplastic; Short=RuBisCO small subunit 3; Flags:
Precursor [Acetabularia peniculus]
gi|732546|emb|CAA36105.1| ribulose bisphosphate
carboxylase, small subunit precursor [Acetabularia
peniculus]
Length = 183
Score = 206 bits (523), Expect = 2e-50
Identities = 96/145 (66%), Positives = 113/145 (77%), Gaps = 2/145 (1%)
Frame = -3
Query: 633 RNMQVWHPRDNKFFETLSFLPPLTDDQIAKQVDYIVSNNWTPALEFTDAEDAYVASTNTV 454
R+M VW P +NK FET S+LPPLTD+QI+KQVDYI++N+WTP LEF ++ AY + N +
Sbjct: 42 RDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCI 101
Query: 453 RFHDNGPCN--YYDNRYWTMWRLPMFGCNDAGQVLGEVQACTKAFPDAYIRLVAFDAVRQ 280
R GP + Y DNRYWTMW+LPMFGC D QVL E+QACTKAFPDAYIRLV FDA RQ
Sbjct: 102 RM---GPVSSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQ 158
Query: 279 VQITGFLVHRPPSAKDFRAPEARSV 205
VQI+GFLVHRPPSA D+R P R V
Sbjct: 159 VQISGFLVHRPPSATDYRLPADRQV 183
>sp|P16136.1|RBS3_ACEAT RecName: Full=Ribulose bisphosphate carboxylase small chain 3,
chloroplastic; Short=RuBisCO small subunit 3; Flags:
Precursor [Acetabularia acetabulum]
gi|732553|emb|CAA36110.1| ribulose bisphophate
carboxylase, small subunit precursor [Acetabularia
acetabulum]
Length = 182
Score = 205 bits (522), Expect = 2e-50
Identities = 97/145 (66%), Positives = 111/145 (76%), Gaps = 2/145 (1%)
Frame = -3
Query: 633 RNMQVWHPRDNKFFETLSFLPPLTDDQIAKQVDYIVSNNWTPALEFTDAEDAYVASTNTV 454
R M VW P +NK FET SFLPPLTD+QI+KQVDYI+ N+WTP LEF ++ AY + N +
Sbjct: 41 RGMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILINSWTPCLEFAASDQAYAGNENCI 100
Query: 453 RFHDNGPC--NYYDNRYWTMWRLPMFGCNDAGQVLGEVQACTKAFPDAYIRLVAFDAVRQ 280
R GP Y DNRYWTMW+LPMFGC DA QVL E+QACTKAFPDAYIRLV FDA RQ
Sbjct: 101 RM---GPVASTYQDNRYWTMWKLPMFGCTDASQVLSEIQACTKAFPDAYIRLVCFDANRQ 157
Query: 279 VQITGFLVHRPPSAKDFRAPEARSV 205
VQI+GFLVHRPPSA D++ P R V
Sbjct: 158 VQISGFLVHRPPSATDYKLPADRQV 182
>sp|P16132.1|RBS4_ACEPE RecName: Full=Ribulose bisphosphate carboxylase small chain 4,
chloroplastic; Short=RuBisCO small subunit 4; Flags:
Precursor [Acetabularia peniculus]
gi|732547|emb|CAA36106.1| ribulose bisphosphate
carboxylase, small subunit precursor [Acetabularia
peniculus]
Length = 182
Score = 205 bits (521), Expect = 3e-50
Identities = 96/145 (66%), Positives = 111/145 (76%), Gaps = 2/145 (1%)
Frame = -3
Query: 633 RNMQVWHPRDNKFFETLSFLPPLTDDQIAKQVDYIVSNNWTPALEFTDAEDAYVASTNTV 454
R M VW P +NK FET S+LPPLTD+QI+KQVDYI++N+WTP LEF ++ AY + N +
Sbjct: 41 REMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCI 100
Query: 453 RFHDNGPC--NYYDNRYWTMWRLPMFGCNDAGQVLGEVQACTKAFPDAYIRLVAFDAVRQ 280
R GP Y DNRYWTMW+LPMFGC D QVL E+QACTKAFPDAYIRLV FDA RQ
Sbjct: 101 RM---GPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQ 157
Query: 279 VQITGFLVHRPPSAKDFRAPEARSV 205
VQI+GFLVHRPPSA D+R P R V
Sbjct: 158 VQISGFLVHRPPSATDYRLPADRQV 182
>sp|P16138.1|RBS5_ACEAT RecName: Full=Ribulose bisphosphate carboxylase small chain 5,
chloroplastic; Short=RuBisCO small subunit 5; Flags:
Precursor [Acetabularia acetabulum]
gi|732555|emb|CAA36112.1| ribulose bisphosphate
carboxylase, small subunit precursor [Acetabularia
acetabulum]
Length = 183
Score = 204 bits (520), Expect = 4e-50
Identities = 96/145 (66%), Positives = 111/145 (76%), Gaps = 2/145 (1%)
Frame = -3
Query: 633 RNMQVWHPRDNKFFETLSFLPPLTDDQIAKQVDYIVSNNWTPALEFTDAEDAYVASTNTV 454
R+M VW P +NK FET SFLPPLTD+QI+KQVDYI++N+WTP LEF ++ AY + N +
Sbjct: 42 RDMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCI 101
Query: 453 RFHDNGPC--NYYDNRYWTMWRLPMFGCNDAGQVLGEVQACTKAFPDAYIRLVAFDAVRQ 280
R GP Y DNRYWTMW+LPMFGC D QVL E+QACT AFPDAYIRLV FDA RQ
Sbjct: 102 RM---GPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDANRQ 158
Query: 279 VQITGFLVHRPPSAKDFRAPEARSV 205
VQI+GFLVHRPPSA D+R P R V
Sbjct: 159 VQISGFLVHRPPSATDYRLPADRQV 183
>gb|ACQ99367.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Monoraphidium convolutum]
Length = 165
Score = 204 bits (520), Expect = 4e-50
Identities = 89/139 (64%), Positives = 109/139 (78%)
Frame = -3
Query: 621 VWHPRDNKFFETLSFLPPLTDDQIAKQVDYIVSNNWTPALEFTDAEDAYVASTNTVRFHD 442
VW P +NKFFET S+LPPL D+QIA+QVDYIV+N WTP LEF+D++ AY+++TN VR +
Sbjct: 26 VWQPVNNKFFETFSYLPPLNDEQIARQVDYIVNNGWTPCLEFSDSQTAYMSNTNVVRIQN 85
Query: 441 NGPCNYYDNRYWTMWRLPMFGCNDAGQVLGEVQACTKAFPDAYIRLVAFDAVRQVQITGF 262
NYYDNRYWT+W+LPMFGC D QVL E+ AC KA PDAY+R+ AFDA RQVQ+
Sbjct: 86 GATANYYDNRYWTLWKLPMFGCTDPSQVLKEIAACVKACPDAYVRMAAFDANRQVQVASM 145
Query: 261 LVHRPPSAKDFRAPEARSV 205
LVHRP SAKD+R PE R +
Sbjct: 146 LVHRPASAKDWRTPEKRQL 164
>sp|P16137.1|RBS4_ACEAT RecName: Full=Ribulose bisphosphate carboxylase small chain 4,
chloroplastic; Short=RuBisCO small subunit 4; Flags:
Precursor [Acetabularia acetabulum]
gi|732554|emb|CAA36111.1| ribulose bisphosphate
carboxylase, small subunit precursor [Acetabularia
acetabulum]
Length = 182
Score = 204 bits (519), Expect = 5e-50
Identities = 96/145 (66%), Positives = 110/145 (75%), Gaps = 2/145 (1%)
Frame = -3
Query: 633 RNMQVWHPRDNKFFETLSFLPPLTDDQIAKQVDYIVSNNWTPALEFTDAEDAYVASTNTV 454
R M VW P +NK FET SFLPPLTD+QI+KQVDYI++N+WTP LEF ++ AY + N +
Sbjct: 41 REMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCI 100
Query: 453 RFHDNGPC--NYYDNRYWTMWRLPMFGCNDAGQVLGEVQACTKAFPDAYIRLVAFDAVRQ 280
R GP Y DNRYWTMW+LPMFGC D QVL E+QACT AFPDAYIRLV FDA RQ
Sbjct: 101 RM---GPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDANRQ 157
Query: 279 VQITGFLVHRPPSAKDFRAPEARSV 205
VQI+GFLVHRPPSA D+R P R V
Sbjct: 158 VQISGFLVHRPPSATDYRLPADRQV 182
>sp|P16133.1|RBS5_ACEPE RecName: Full=Ribulose bisphosphate carboxylase small chain 5,
chloroplastic; Short=RuBisCO small subunit 5; Flags:
Precursor [Acetabularia peniculus]
gi|732548|emb|CAA36107.1| ribulose bisphosphate
carboxylase, small subunit precursor [Acetabularia
peniculus]
Length = 184
Score = 204 bits (519), Expect = 5e-50
Identities = 95/146 (65%), Positives = 112/146 (76%), Gaps = 2/146 (1%)
Frame = -3
Query: 636 ARNMQVWHPRDNKFFETLSFLPPLTDDQIAKQVDYIVSNNWTPALEFTDAEDAYVASTNT 457
+R M VW P +NK FET S+LPPLTD+QI+KQVDYI++N+WTP LEF ++ AY + N
Sbjct: 42 SREMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENC 101
Query: 456 VRFHDNGPC--NYYDNRYWTMWRLPMFGCNDAGQVLGEVQACTKAFPDAYIRLVAFDAVR 283
+R GP Y DNRYWTMW+LPMFGC D QVL E+QACTKAFPDAYIRLV FDA R
Sbjct: 102 IRM---GPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANR 158
Query: 282 QVQITGFLVHRPPSAKDFRAPEARSV 205
QVQI+GFLVHRPP+A D+R P R V
Sbjct: 159 QVQISGFLVHRPPTATDYRLPADRQV 184
>sp|Q38693.1|RBS7_ACEPE RecName: Full=Ribulose bisphosphate carboxylase small chain 7,
chloroplastic; Short=RuBisCO small subunit 7; AltName:
Full=rbcS1; Flags: Precursor [Acetabularia peniculus]
gi|2654374|emb|CAA82265.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit [Acetabularia
peniculus]
Length = 183
Score = 202 bits (515), Expect = 2e-49
Identities = 95/145 (65%), Positives = 111/145 (76%), Gaps = 2/145 (1%)
Frame = -3
Query: 633 RNMQVWHPRDNKFFETLSFLPPLTDDQIAKQVDYIVSNNWTPALEFTDAEDAYVASTNTV 454
R+M VW P +NK FET S+LPPLTD+QI+KQVDYI++N+WTP LEF ++ AY + N +
Sbjct: 42 RDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCI 101
Query: 453 RFHDNGPC--NYYDNRYWTMWRLPMFGCNDAGQVLGEVQACTKAFPDAYIRLVAFDAVRQ 280
R GP Y DNRYWTMW+LPMFGC D QVL ++QACTKAFPDAYIRLV FDA RQ
Sbjct: 102 RM---GPVASTYQDNRYWTMWKLPMFGCTDGSQVLSDMQACTKAFPDAYIRLVCFDANRQ 158
Query: 279 VQITGFLVHRPPSAKDFRAPEARSV 205
VQI GFLVHRPPSA D+R P R V
Sbjct: 159 VQICGFLVHRPPSATDYRLPADRQV 183
>ref|XP_011395737.1| Ribulose bisphosphate carboxylase small chain 7, chloroplastic
[Auxenochlorella protothecoides]
gi|675350431|gb|KFM22871.1| Ribulose bisphosphate
carboxylase small chain 7, chloroplastic
[Auxenochlorella protothecoides]
Length = 203
Score = 202 bits (515), Expect = 2e-49
Identities = 98/141 (69%), Positives = 107/141 (75%)
Frame = -3
Query: 627 MQVWHPRDNKFFETLSFLPPLTDDQIAKQVDYIVSNNWTPALEFTDAEDAYVASTNTVRF 448
M VW P +NK FET SFLPPL+DDQI++QVDYI+SN W P LEF D YVA NT+R
Sbjct: 64 MLVWTPTNNKMFETFSFLPPLSDDQISRQVDYIISNKWIPCLEFIDDPFPYVAQENTIRM 123
Query: 447 HDNGPCNYYDNRYWTMWRLPMFGCNDAGQVLGEVQACTKAFPDAYIRLVAFDAVRQVQIT 268
NYYDNRYWTMW+LPMFGCND QVL EV C KAFPDAYIRLVAFD VRQVQI
Sbjct: 124 GAVAS-NYYDNRYWTMWKLPMFGCNDGSQVLTEVGNCRKAFPDAYIRLVAFDNVRQVQIG 182
Query: 267 GFLVHRPPSAKDFRAPEARSV 205
GFLVHRPPSA DF+ + RSV
Sbjct: 183 GFLVHRPPSANDFQPTDKRSV 203
>gb|ACF16408.1| chloroplast ribulose 1,5-bisphosphate carboxylase/oxygenase small
subunit [Lobosphaera incisa] gi|657202139|gb|AID50176.1|
chloroplast ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit [Lobosphaera incisa]
Length = 189
Score = 202 bits (515), Expect = 2e-49
Identities = 103/190 (54%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Frame = -3
Query: 762 MAALNLSQIARPVA----AKPVAPCCGLXXXXXXXXXXXXAHSNVTARNMQVWHPRDNKF 595
MAA S ++ PVA A P L + + R M VW P +N++
Sbjct: 1 MAAACASLLSAPVAVVASAAPARSLKALAPARAATFAQKTVSNGIKTRQMMVWQPTNNRY 60
Query: 594 FETLSFLPPLTDDQIAKQVDYIVSNNWTPALEFTDAEDAYVASTNTVRFHDNGPCNYYDN 415
FETLSFLPPLTDDQIAKQVDY+++N W P LEF++A AYVAS N +R+ N Y DN
Sbjct: 61 FETLSFLPPLTDDQIAKQVDYMINNGWVPCLEFSEANMAYVASDNCIRY-GNVASGYQDN 119
Query: 414 RYWTMWRLPMFGCNDAGQVLGEVQACTKAFPDAYIRLVAFDAVRQVQITGFLVHRPPSAK 235
RYWTM++LPMFGC D GQVL E+ K FPDAYIRLVAFD V Q Q+ GFLVHRP SA
Sbjct: 120 RYWTMFKLPMFGCTDPGQVLTEIANAEKCFPDAYIRLVAFDNVTQTQVAGFLVHRPASAN 179
Query: 234 DFRAPEARSV 205
DFR P RS+
Sbjct: 180 DFRKPSERSI 189
>ref|XP_002955684.1| ribulose-bisphosphate carboxylase small subunit [Volvox carteri f.
nagariensis] gi|300259093|gb|EFJ43324.1|
ribulose-bisphosphate carboxylase small subunit [Volvox
carteri f. nagariensis]
Length = 185
Score = 202 bits (515), Expect = 2e-49
Identities = 108/192 (56%), Positives = 126/192 (65%), Gaps = 6/192 (3%)
Frame = -3
Query: 762 MAALNLSQIARPVAAKP----VAPCCGLXXXXXXXXXXXXAHSNVTARNMQVWHPRDNKF 595
MAAL A+P V PC L A +N M VW P +NK
Sbjct: 1 MAALLAKSSVAAAVARPQRSSVRPCAALKPAVKAAPVATPAQAN----KMMVWTPVNNKM 56
Query: 594 FETLSFLPPLTDDQIAKQVDYIVSNNWTPALEFTDAEDAYVASTNTVRFHDNGP--CNYY 421
FET S+LPPLTD+QIA QVDYIV+N W P LEF +A+ AYV++ +TVRF GP C YY
Sbjct: 57 FETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESTVRF---GPVSCLYY 113
Query: 420 DNRYWTMWRLPMFGCNDAGQVLGEVQACTKAFPDAYIRLVAFDAVRQVQITGFLVHRPPS 241
DNRYWTMW+LPMFGC D QVL E+ ACTKAFPDAY+RLVAFD V+QVQI GFLV RP S
Sbjct: 114 DNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNVKQVQIMGFLVQRPKS 173
Query: 240 AKDFRAPEARSV 205
A+D++ RSV
Sbjct: 174 ARDWQPANKRSV 185
>ref|XP_002955677.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Volvox carteri f. nagariensis]
gi|28797561|gb|AAO46873.1| ribulose-bisphosphate
carboxylase small subunit Vc3 [Volvox carteri]
gi|300259086|gb|EFJ43317.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit [Volvox carteri f.
nagariensis]
Length = 185
Score = 202 bits (513), Expect = 3e-49
Identities = 106/180 (58%), Positives = 124/180 (68%), Gaps = 2/180 (1%)
Frame = -3
Query: 738 IARPVAAKPVAPCCGLXXXXXXXXXXXXAHSNVTARNMQVWHPRDNKFFETLSFLPPLTD 559
+ARP A V P GL A +N M VW P +NK FET S+LPPLTD
Sbjct: 14 VARP-ARSSVRPVAGLKPAVKAAPVAAPAQAN----KMMVWTPVNNKMFETFSYLPPLTD 68
Query: 558 DQIAKQVDYIVSNNWTPALEFTDAEDAYVASTNTVRFHDNGP--CNYYDNRYWTMWRLPM 385
+QIA QVDYIV+N W P LEF +A+ AYV++ +TVRF GP C YYDNRYWTMW+LPM
Sbjct: 69 EQIAAQVDYIVANGWIPCLEFAEADKAYVSNESTVRF---GPVSCLYYDNRYWTMWKLPM 125
Query: 384 FGCNDAGQVLGEVQACTKAFPDAYIRLVAFDAVRQVQITGFLVHRPPSAKDFRAPEARSV 205
FGC D QVL E+ ACTKAFPDAY+RLVAFD V+QVQI GFLV RP SA+D++ RSV
Sbjct: 126 FGCRDPMQVLREIVACTKAFPDAYVRLVAFDNVKQVQIMGFLVQRPKSARDWQPANKRSV 185
>gb|AGH30308.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Chromochloris zofingiensis]
gi|468362390|gb|AGH30309.1| chloroplast
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Chromochloris zofingiensis]
Length = 173
Score = 202 bits (513), Expect = 3e-49
Identities = 94/144 (65%), Positives = 107/144 (74%)
Frame = -3
Query: 636 ARNMQVWHPRDNKFFETLSFLPPLTDDQIAKQVDYIVSNNWTPALEFTDAEDAYVASTNT 457
A M VW P +NK+FET S LPPLTDDQIA+QVDYIV+N WTP LEF++ E AY A NT
Sbjct: 31 ANKMMVWRPDNNKYFETFSHLPPLTDDQIARQVDYIVNNGWTPCLEFSEPEIAYTAQYNT 90
Query: 456 VRFHDNGPCNYYDNRYWTMWRLPMFGCNDAGQVLGEVQACTKAFPDAYIRLVAFDAVRQV 277
+RF YYDNRYWTMW+LPMFGC D QVL E+ A TKAFP AY+R+ AFDA RQV
Sbjct: 91 IRFGAVAS-GYYDNRYWTMWKLPMFGCTDPSQVLKEIDAATKAFPSAYVRMAAFDANRQV 149
Query: 276 QITGFLVHRPPSAKDFRAPEARSV 205
Q+ LVHRPP AKD+R PE R V
Sbjct: 150 QVVSMLVHRPPGAKDYRLPEDRRV 173
>sp|Q38692.1|RBS6_ACEPE RecName: Full=Ribulose bisphosphate carboxylase small chain 6,
chloroplastic; Short=RuBisCO small subunit 6; AltName:
Full=rbcS4; Flags: Precursor [Acetabularia peniculus]
gi|2654375|emb|CAA82266.1| ribulosebiphosphate
carboxylase, small subunit [Acetabularia peniculus]
Length = 182
Score = 201 bits (512), Expect = 3e-49
Identities = 104/190 (54%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
Frame = -3
Query: 762 MAALNLSQ--IARPVAAKPVAPCCGLXXXXXXXXXXXXAHSNVTARNMQVWHPRDNKFFE 589
MAA +S+ I+ +KP+AP + + R M VW P +NK FE
Sbjct: 1 MAATMMSKTIISSKQCSKPIAP-----PKVSINKGFVNTSAAIKNREMMVWQPFNNKMFE 55
Query: 588 TLSFLPPLTDDQIAKQVDYIVSNNWTPALEFTDAEDAYVASTNTVRFHDNGPC--NYYDN 415
T S+LPPLTD+QI+KQVDYI++N WTP LEF ++ AY + N + GP Y DN
Sbjct: 56 TFSYLPPLTDEQISKQVDYILANAWTPCLEFAASDQAYAGNENCITM---GPVASTYQDN 112
Query: 414 RYWTMWRLPMFGCNDAGQVLGEVQACTKAFPDAYIRLVAFDAVRQVQITGFLVHRPPSAK 235
RYWTMW+LPMFGC D QVL E+QACTKAFPDAYIRLV FDA RQVQI+GFLVHRPPSA
Sbjct: 113 RYWTMWKLPMFGCTDGSQVLTEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPPSAT 172
Query: 234 DFRAPEARSV 205
D+R P R V
Sbjct: 173 DYRLPADRQV 182