BLASTX nr result

ID: Cinnamomum23_contig00024471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00024471
         (510 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006300002.1| hypothetical protein CARUB_v10016225mg [Caps...    57   4e-06

>ref|XP_006300002.1| hypothetical protein CARUB_v10016225mg [Capsella rubella]
           gi|482568711|gb|EOA32900.1| hypothetical protein
           CARUB_v10016225mg [Capsella rubella]
          Length = 125

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 7/133 (5%)
 Frame = -1

Query: 471 MGNCLNSNSCHEGATEEDFEYSRRGSSADLESKMQGGKKGVLNVKKSSIINKEEKGVVRV 292
           MGNCL  N+   G  +++ E     S   ++S ++ GK  +   ++S    + E  VVR+
Sbjct: 1   MGNCLRHNNGLAGEEKDNLE-----SEPQIKSVLEEGKTSIRGKEESERSTEGESKVVRI 55

Query: 291 KIVLSKQDAARLLSKLEGSGDGDVL-------GAAISKLRSTKNDHMGFVGHEPCGTTWR 133
           K+ ++K++  ++L   +G      L       G  ISK    + +       EPC   WR
Sbjct: 56  KVTVTKEELRQILGHKKGINSIQHLVHVLKDSGRNISKANDEEEN-------EPCDENWR 108

Query: 132 PVLESIPENSLMY 94
           P LESIPE    +
Sbjct: 109 PSLESIPEKQWFF 121


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