BLASTX nr result

ID: Cinnamomum23_contig00024306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00024306
         (517 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010265022.1| PREDICTED: pentatricopeptide repeat-containi...    63   7e-08

>ref|XP_010265022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08610
           [Nelumbo nucifera]
          Length = 582

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 37/104 (35%), Positives = 53/104 (50%)
 Frame = -1

Query: 325 MGYTLFLQQSIGTVSFSHGLNIYNDHLNLSYNLDRNSPFRLCLSQIDCLMKSEPKLETCL 146
           M +T+F Q S   + F HG+++  +H N  + + R S  R+    I+C +K + KL +CL
Sbjct: 1   MEFTIFSQNSTSGMLFLHGMHLSRNHFNPKHGIGRYSWTRVSAFHINCFIKGKGKLGSCL 60

Query: 145 QRNGAFGIPRKNGFLAQCGGLLRSACIDRVDEGDESIYNLETSV 14
           Q    F       FL  C G  RS CIDR +EG +     E SV
Sbjct: 61  QWQAGFSSGGYT-FLPHCIGQQRSICIDRGNEGRKDDRTFERSV 103


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