BLASTX nr result

ID: Cinnamomum23_contig00024203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00024203
         (311 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009124968.1| PREDICTED: uncharacterized protein LOC103850...    62   2e-07
ref|XP_008245529.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    60   6e-07
ref|XP_008355389.1| PREDICTED: putative ribonuclease H protein A...    57   4e-06
ref|XP_008367240.1| PREDICTED: putative ribonuclease H protein A...    57   4e-06
ref|XP_008356436.1| PREDICTED: putative ribonuclease H protein A...    57   5e-06
ref|XP_008351830.1| PREDICTED: putative ribonuclease H protein A...    57   5e-06
ref|XP_008391838.1| PREDICTED: uncharacterized protein LOC103454...    57   5e-06
ref|XP_008372934.1| PREDICTED: putative ribonuclease H protein A...    56   8e-06

>ref|XP_009124968.1| PREDICTED: uncharacterized protein LOC103850017 [Brassica rapa]
          Length = 1053

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
 Frame = +2

Query: 2   LDKIIGRF*SASIKGRSIVDNI-VTHEI*QSLKNEKKLEVVGL--KLDMAKAYDRMEWDF 172
           L+KII    SA + GR+I DNI +THE+  +LK  K  + V L  K DM+KAYDR+EWDF
Sbjct: 235 LEKIISENQSAFVPGRAIGDNILITHEVLHTLKTSKAAKRVSLAVKTDMSKAYDRLEWDF 294

Query: 173 C*TTFESLWF 202
             T  E L F
Sbjct: 295 ISTVLERLGF 304


>ref|XP_008245529.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC103343662 [Prunus mume]
          Length = 1725

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 35/60 (58%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
 Frame = +2

Query: 2   LDKIIGRF*SASIKGRSIVDNI-VTHEI*QSLKNEKKLEV--VGLKLDMAKAYDRMEWDF 172
           LDKII     A I GR I DN+ V HE   SLK  KK ++  +GLKLDM+KAYDR+EWDF
Sbjct: 553 LDKIISPQQCAFIPGRQIQDNVLVAHEAFHSLKIRKKTKIFEMGLKLDMSKAYDRIEWDF 612


>ref|XP_008355389.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 883

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
 Frame = +2

Query: 2   LDKIIGRF*SASIKGRSIVDNI-VTHEI*QSLKNEKK--LEVVGLKLDMAKAYDRMEWDF 172
           + K+IG   SA + G+ I DNI V HEI  SL ++ K   + + +KLDMAKAYDR+EWDF
Sbjct: 29  MPKVIGENQSAFVAGKQIQDNILVVHEILHSLNHQSKDMQKGMAIKLDMAKAYDRVEWDF 88

Query: 173 C*TTFESLWFS*EIC 217
             +    L F+   C
Sbjct: 89  LLSMMYKLGFAPFFC 103


>ref|XP_008367240.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 806

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
 Frame = +2

Query: 2   LDKIIGRF*SASIKGRSIVDNI-VTHEI*QSLKNEKK--LEVVGLKLDMAKAYDRMEWDF 172
           + K+IG   SA + G+ I DNI V HEI  SL ++ K   + + +KLDMAKAYDR+EWDF
Sbjct: 1   MPKVIGENQSAFVAGKQIQDNILVVHEILHSLNHQSKDMQKGMAIKLDMAKAYDRVEWDF 60

Query: 173 C*TTFESLWFS*EIC 217
             +    L F+   C
Sbjct: 61  LLSMMYKLGFAPFFC 75


>ref|XP_008356436.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 1089

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
 Frame = +2

Query: 2   LDKIIGRF*SASIKGRSIVDNIV-THEI*QSLKNEKKLEVVGL--KLDMAKAYDRMEWDF 172
           + K+IG   SA + G+ I DNI+  HE+  SL ++++ +  G+  KLDMAKAYDR+EWDF
Sbjct: 235 MPKVIGDNQSAFVAGKQIQDNILXVHEVLHSLLHQRREDQAGMAIKLDMAKAYDRVEWDF 294

Query: 173 C*TTFESLWFS*EIC 217
             T    + F+   C
Sbjct: 295 LITXMAXMGFAPLFC 309


>ref|XP_008351830.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 1106

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
 Frame = +2

Query: 2   LDKIIGRF*SASIKGRSIVDNI-VTHEI*QSLKNEKKLEVVGL--KLDMAKAYDRMEWDF 172
           + K+IG   SA + G+ I DNI V HE+  SL ++++ +  G+  KLDMAKAYDR+EW+F
Sbjct: 252 MPKVIGDNQSAFVAGKQIQDNILVVHEVLHSLLHQRREDQAGMAIKLDMAKAYDRVEWNF 311

Query: 173 C*TTFESLWFS*EIC 217
                  L FS   C
Sbjct: 312 LIAIMSKLGFSPIFC 326


>ref|XP_008391838.1| PREDICTED: uncharacterized protein LOC103454030 [Malus domestica]
          Length = 1374

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
 Frame = +2

Query: 2   LDKIIGRF*SASIKGRSIVDNI-VTHEI*QSLKNEKK--LEVVGLKLDMAKAYDRMEWDF 172
           + K+IG   SA + G+ I DNI V HEI  SL ++ K   + + +KLDMAKAYDR+EW+F
Sbjct: 460 MPKVIGENQSAFVAGKQIQDNILVVHEILHSLNHQSKDMQKGMAIKLDMAKAYDRVEWEF 519

Query: 173 C*TTFESLWFS*EIC 217
             +    L F+   C
Sbjct: 520 LFSMMSKLGFAPMFC 534


>ref|XP_008372934.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 961

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
 Frame = +2

Query: 29  SASIKGRSIVDN-IVTHEI*QSLKNEKKLEVVGL--KLDMAKAYDRMEWDFC*TTFESLW 199
           SA + G+ I DN +V HEI  SL ++ K + +G+  KLDMAKAYDR+EWDF       L 
Sbjct: 116 SAFVAGKQIQDNXLVVHEILHSLMHQSKEDTMGMAIKLDMAKAYDRVEWDFLLAMMSKLG 175

Query: 200 FS*EIC 217
           F    C
Sbjct: 176 FDQRFC 181


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