BLASTX nr result

ID: Cinnamomum23_contig00023661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00023661
         (379 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012090853.1| PREDICTED: protein RRP5 homolog [Jatropha cu...    68   2e-09
ref|XP_011039519.1| PREDICTED: protein RRP5 homolog [Populus eup...    58   3e-06
ref|XP_002322744.2| hypothetical protein POPTR_0016s06250g [Popu...    57   6e-06

>ref|XP_012090853.1| PREDICTED: protein RRP5 homolog [Jatropha curcas]
           gi|643705360|gb|KDP21906.1| hypothetical protein
           JCGZ_03044 [Jatropha curcas]
          Length = 1928

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 44/93 (47%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
 Frame = -3

Query: 302 MAIPRKKKSFNRNPKDGLKPKKTLSKSSNRKKDDSESTAKSKTSFMQLEDDAPDFPRGGR 123
           MA   KKKS NR  KDG K  K   K    KK DS  T  S+   +QLEDD PDFPRGG 
Sbjct: 1   MAASSKKKSQNRKLKDGPKFNKDSKKPFKAKKKDSNDTVPSEAISLQLEDDVPDFPRGGG 60

Query: 122 SALSXXXXXXXXXXXXXXXESEQRDS--KKKGK 30
           S+LS               E+E+R S  KKKGK
Sbjct: 61  SSLSQRERKEIRAEADAEFEAEERVSVMKKKGK 93


>ref|XP_011039519.1| PREDICTED: protein RRP5 homolog [Populus euphratica]
          Length = 1938

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 36/97 (37%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
 Frame = -3

Query: 302 MAIPRKKKSFNRNPKDGLKPKKTLSK------SSNRKKDDSESTAKSKTSFMQLEDDAPD 141
           MA P K+K  N    DG K  K   K      + N+K   +E+  K  +  +QLEDD PD
Sbjct: 1   MAAPSKRKQQNPKQNDGPKFNKASQKQFKAKQTKNKKSFTNEAVVKDASIALQLEDDVPD 60

Query: 140 FPRGGRSALSXXXXXXXXXXXXXXXESEQRDSKKKGK 30
           FPRGG+S+LS               E E+R   KK K
Sbjct: 61  FPRGGKSSLSQREREEIRAQVDEELEGEERRLNKKNK 97


>ref|XP_002322744.2| hypothetical protein POPTR_0016s06250g [Populus trichocarpa]
           gi|550320958|gb|EEF04505.2| hypothetical protein
           POPTR_0016s06250g [Populus trichocarpa]
          Length = 1856

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
 Frame = -3

Query: 302 MAIPRKKKSFNRNPKDGLKPKKTLSK------SSNRKKDDSESTAKSKTSFMQLEDDAPD 141
           M  P KKK  N    DG K  K   K      + N+K   +++  K  +  +QLEDD PD
Sbjct: 1   MTAPSKKKQQNPKQNDGPKFNKASQKQFKAKQTKNKKSFSNDAVVKDASIALQLEDDVPD 60

Query: 140 FPRGGRSALSXXXXXXXXXXXXXXXESEQRDSKKKGK 30
           FPRGG+S+LS               E E+R   KK K
Sbjct: 61  FPRGGKSSLSQREREEIRAQVDEEFEGEERRLNKKNK 97


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