BLASTX nr result

ID: Cinnamomum23_contig00023225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00023225
         (485 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008805560.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    69   2e-09
ref|XP_010919414.1| PREDICTED: putative pentatricopeptide repeat...    66   8e-09
ref|XP_010276893.1| PREDICTED: pentatricopeptide repeat-containi...    63   9e-08
ref|XP_010658315.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06
emb|CAN70889.1| hypothetical protein VITISV_005594 [Vitis vinifera]    59   1e-06
ref|XP_007040339.1| Tetratricopeptide repeat superfamily protein...    57   4e-06

>ref|XP_008805560.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g01580 [Phoenix
           dactylifera]
          Length = 695

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 32/68 (47%), Positives = 49/68 (72%)
 Frame = -2

Query: 205 TPTTYINPIPHQSDRPFLDSTTSLHLLNSYAADRDSKSTASVHAAILKCGVNTNVFVSNS 26
           +P ++  P  H ++  FLDS  ++HLLNS AA RD + T  +H+ + K G+++N+FV+NS
Sbjct: 11  SPPSHSRPPSHPNNL-FLDSAAAVHLLNSSAAQRDLRLTTCLHSGLFKSGLHSNLFVANS 69

Query: 25  LLDAYAKC 2
           LLDAY+KC
Sbjct: 70  LLDAYSKC 77


>ref|XP_010919414.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580 [Elaeis guineensis]
          Length = 696

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 10/77 (12%)
 Frame = -2

Query: 202 PTTYINPIP---HQSDRP-------FLDSTTSLHLLNSYAADRDSKSTASVHAAILKCGV 53
           P   + P P   H   RP       FLDS  ++ LLNS AA RD + T  +HA +LK G+
Sbjct: 2   PPISLQPPPSPSHPHSRPLSPPSNLFLDSAAAVRLLNSSAAQRDLRLTTCLHAGLLKSGL 61

Query: 52  NTNVFVSNSLLDAYAKC 2
           ++NVFV+NSLLD Y+KC
Sbjct: 62  HSNVFVANSLLDVYSKC 78


>ref|XP_010276893.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Nelumbo nucifera]
          Length = 711

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
 Frame = -2

Query: 241 KFPNTQNQIRSNTPT---TYINPIPHQSDRPFLDSTTSLHLLNSYAADRDSKSTASVHAA 71
           K  + Q QI S   T   T    +P +      DS  ++HLLNS  + R+ K    +HA 
Sbjct: 16  KLSSVQEQIGSKKTTNKETLHLKLPPEEPPLLFDSRAAVHLLNSCTSARNLKLGLCIHAH 75

Query: 70  ILKCGVNTNVFVSNSLLDAYAKC 2
           +LK G+++NVFVSNSLLD YAKC
Sbjct: 76  VLKSGLHSNVFVSNSLLDFYAKC 98


>ref|XP_010658315.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
           gi|297742233|emb|CBI34382.3| unnamed protein product
           [Vitis vinifera]
          Length = 705

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 27/50 (54%), Positives = 39/50 (78%)
 Frame = -2

Query: 151 DSTTSLHLLNSYAADRDSKSTASVHAAILKCGVNTNVFVSNSLLDAYAKC 2
           DS T++ +L+S AA+RD +  + +H  ILK G++TNVFV+NSL+D YAKC
Sbjct: 41  DSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKC 90


>emb|CAN70889.1| hypothetical protein VITISV_005594 [Vitis vinifera]
          Length = 630

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 27/50 (54%), Positives = 39/50 (78%)
 Frame = -2

Query: 151 DSTTSLHLLNSYAADRDSKSTASVHAAILKCGVNTNVFVSNSLLDAYAKC 2
           DS T++ +L+S AA+RD +  + +H  ILK G++TNVFV+NSL+D YAKC
Sbjct: 41  DSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKC 90


>ref|XP_007040339.1| Tetratricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508777584|gb|EOY24840.1| Tetratricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 718

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
 Frame = -2

Query: 229 TQNQIRSNTPTTYINPIPHQ---SDRPFLDSTTSLHLLNSYAADRDSKSTASVHAAILKC 59
           T  + R+N P  +   +  Q   SD    DS +++H L S  A R  +  + +H  +LK 
Sbjct: 25  TTKEPRNNNPVQFRKSLSSQNLSSDIAAPDSVSTVHALKSCTASRSLELGSCIHGTVLKS 84

Query: 58  GVNTNVFVSNSLLDAYAKC 2
           G+ TNVFV+NSLLD Y KC
Sbjct: 85  GLCTNVFVNNSLLDMYMKC 103


Top