BLASTX nr result

ID: Cinnamomum23_contig00022833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00022833
         (579 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62439.1| hypothetical protein VITISV_044009 [Vitis vinifera]    46   2e-06
emb|CAN77370.1| hypothetical protein VITISV_033119 [Vitis vinifera]    46   2e-06
ref|XP_008364610.1| PREDICTED: putative ribonuclease H protein A...    43   3e-06
emb|CAN78776.1| hypothetical protein VITISV_029750 [Vitis vinifera]    44   4e-06
emb|CAN82834.1| hypothetical protein VITISV_042298 [Vitis vinifera]    45   6e-06

>emb|CAN62439.1| hypothetical protein VITISV_044009 [Vitis vinifera]
          Length = 1290

 Score = 46.2 bits (108), Expect(2) = 2e-06
 Identities = 18/28 (64%), Positives = 23/28 (82%)
 Frame = +2

Query: 2    CISKEEGGIGIRRHRQMNQALLGKWLWR 85
            C  KE+GG+GIRR   +N+ALLGKW+WR
Sbjct: 1029 CTQKEKGGLGIRRMGLLNKALLGKWIWR 1056



 Score = 32.3 bits (72), Expect(2) = 2e-06
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +3

Query: 135  KYGLPRNGWDLQDPPNK-SLAIWRGILSIKKLLMENIKIKPGRGREFFFGNTSW 293
            K+GL   GW  ++      + +W+ IL        N+K K GRG +  F    W
Sbjct: 1072 KHGLEGCGWKSKEVQGPFGVGVWKEILKEMSWCWNNMKFKVGRGSKIMFWTDHW 1125


>emb|CAN77370.1| hypothetical protein VITISV_033119 [Vitis vinifera]
          Length = 1190

 Score = 45.8 bits (107), Expect(2) = 2e-06
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +2

Query: 2   CISKEEGGIGIRRHRQMNQALLGKWLWR 85
           C  K++GG+GIRR   +N+ALLGKW+WR
Sbjct: 803 CTQKDKGGLGIRRMGSLNKALLGKWIWR 830



 Score = 32.3 bits (72), Expect(2) = 2e-06
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +3

Query: 135  KYGLPRNGWDLQDPPNK-SLAIWRGILSIKKLLMENIKIKPGRGREFFFGNTSW 293
            K+GL   GW  ++      + +W+ IL        N+K K GRG +  F    W
Sbjct: 846  KHGLEGGGWKSKEARGLVGVGVWKEILKEMGWCWNNMKFKVGRGNKVMFWTDHW 899


>ref|XP_008364610.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 389

 Score = 42.7 bits (99), Expect(2) = 3e-06
 Identities = 21/40 (52%), Positives = 25/40 (62%)
 Frame = +2

Query: 2   CISKEEGGIGIRRHRQMNQALLGKWLWRTG*GTNGLRRQV 121
           C SKEEGG+G+   R  N ALL KWLWR    +N L  +V
Sbjct: 41  CKSKEEGGLGLGNLRIRNAALLAKWLWRFPRESNSLWHRV 80



 Score = 35.0 bits (79), Expect(2) = 3e-06
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
 Frame = +3

Query: 135 KYGLPRNGWDLQDPP-NKSLAIWRGILSIKKLLMENIKIKPGRGREFFFGNTSWQEIGLW 311
           KYGL  NGWD + P    S   W GI +     + +   + G G    F    W E G  
Sbjct: 84  KYGLEANGWDAKCPSRGSSRCPWTGISAGYPSFLHSCIFEVGNGERLRFWEDGWLEGGPL 143

Query: 312 LLSFRTCSNVPRTRMLRSNPTCQELVI 392
              F    ++ RT+    N +   LV+
Sbjct: 144 KEQFPRLFSLSRTK----NQSISNLVV 166


>emb|CAN78776.1| hypothetical protein VITISV_029750 [Vitis vinifera]
          Length = 763

 Score = 43.9 bits (102), Expect(2) = 4e-06
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +2

Query: 2   CISKEEGGIGIRRHRQMNQALLGKWLWR 85
           C  KE GG+GIR+   +N+ALLGKW+WR
Sbjct: 401 CSQKESGGLGIRKIDLLNKALLGKWIWR 428



 Score = 33.5 bits (75), Expect(2) = 4e-06
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +3

Query: 135 KYGLPRNGWDLQDPPNK-SLAIWRGILSIKKLLMENIKIKPGRGREFFFGNTSW 293
           KYG    GW  ++      + +WR IL       ENIK K G+G +  F    W
Sbjct: 444 KYGQLGFGWRTKEARGTFGVGVWREILKESSWCWENIKFKVGKGTKVSFWTDHW 497


>emb|CAN82834.1| hypothetical protein VITISV_042298 [Vitis vinifera]
          Length = 1416

 Score = 45.1 bits (105), Expect(2) = 6e-06
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +2

Query: 2    CISKEEGGIGIRRHRQMNQALLGKWLWR 85
            C  K++GG+GIRR   +N+ALLGKW+WR
Sbjct: 1229 CTQKDKGGLGIRRMGLLNKALLGKWIWR 1256



 Score = 31.6 bits (70), Expect(2) = 6e-06
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +3

Query: 135  KYGLPRNGWDLQDPPNK-SLAIWRGILSIKKLLMENIKIKPGRGREFF 275
            KYGL   GW  ++        +W+ IL        N+K K GRG + F
Sbjct: 1272 KYGLEGGGWKSKEARGPFGAGVWKEILKEMGWCWNNMKFKVGRGNKIF 1319


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