BLASTX nr result

ID: Cinnamomum23_contig00022525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00022525
         (206 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008365134.1| PREDICTED: putative disease resistance prote...    58   3e-06
ref|XP_010276307.1| PREDICTED: putative disease resistance prote...    57   5e-06
ref|XP_008378173.1| PREDICTED: putative disease resistance prote...    56   8e-06

>ref|XP_008365134.1| PREDICTED: putative disease resistance protein RGA3 [Malus
           domestica]
          Length = 815

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 30/67 (44%), Positives = 48/67 (71%)
 Frame = -1

Query: 203 FNFNEVSKREVDDMPNMNERETSSLIDESEIFGRDAVKEEIVNGLVSETSKEKRPFSVVS 24
           +NF  +++R + + P   +RE +S +DES IFGRD  KE +V+ L++E+S+E+R   V+ 
Sbjct: 146 YNFX-ITERMISEQP---KREXTSFVDESIIFGRDQQKEVLVSKLLNESSQEERGLLVIP 201

Query: 23  IVGMGGL 3
           IVGMGG+
Sbjct: 202 IVGMGGM 208


>ref|XP_010276307.1| PREDICTED: putative disease resistance protein RGA3 [Nelumbo
           nucifera]
          Length = 1052

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 30/54 (55%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
 Frame = -1

Query: 161 PNMNERETSSLIDESEIFGRDAVKEEIVNGLVSETSK-EKRPFSVVSIVGMGGL 3
           P+++  +TSSLI+ES  FGRD  KE IV+ LVSE+S+ EK    ++SI+GMGGL
Sbjct: 150 PSISRLQTSSLIEESTTFGRDKEKEVIVSQLVSESSRQEKSLIPIISIIGMGGL 203


>ref|XP_008378173.1| PREDICTED: putative disease resistance protein RGA3 [Malus
           domestica]
          Length = 997

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 32/68 (47%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
 Frame = -1

Query: 203 FNFNEVSKREVDDMPNMNERE-TSSLIDESEIFGRDAVKEEIVNGLVSETSKEKRPFSVV 27
           +NF  + +R + + P   ERE TSS +DES IFGR+  KE +V+ L++E+S+E+R   V+
Sbjct: 158 YNFRFI-ERMISEQP---EREKTSSFVDESTIFGREQQKEVLVSKLLNESSQEERGLLVI 213

Query: 26  SIVGMGGL 3
            IVGMGG+
Sbjct: 214 PIVGMGGM 221


Top