BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00022352
         (1319 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010259314.1| PREDICTED: RNA pseudouridine synthase 1 [Nel...   454   e-125
ref|XP_009373279.1| PREDICTED: RNA pseudouridine synthase 1-like...   424   e-116
ref|XP_008359854.1| PREDICTED: RNA pseudouridine synthase 1-like...   422   e-115
ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prun...   421   e-115
ref|XP_011466146.1| PREDICTED: RNA pseudouridine synthase 1 isof...   418   e-114
ref|XP_011466144.1| PREDICTED: RNA pseudouridine synthase 1 isof...   418   e-114
ref|XP_011466145.1| PREDICTED: RNA pseudouridine synthase 1 isof...   417   e-114
ref|XP_008245928.1| PREDICTED: RNA pseudouridine synthase 1 [Pru...   417   e-114
ref|XP_009414384.1| PREDICTED: RNA pseudouridine synthase 1 [Mus...   417   e-113
gb|KDO81689.1| hypothetical protein CISIN_1g018524mg [Citrus sin...   413   e-112
ref|XP_007031140.1| Pseudouridine synthase family protein isofor...   413   e-112
ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like...   413   e-112
ref|XP_011023769.1| PREDICTED: RNA pseudouridine synthase 1 [Pop...   411   e-112
ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [...   410   e-111
ref|XP_007031141.1| Pseudouridine synthase family protein isofor...   410   e-111
ref|XP_012476516.1| PREDICTED: RNA pseudouridine synthase 1 [Gos...   408   e-111
ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citr...   408   e-111
emb|CDP18242.1| unnamed protein product [Coffea canephora]            405   e-110
ref|XP_010105628.1| RNA pseudourine synthase 1 [Morus notabilis]...   401   e-109
ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like...   401   e-109

>ref|XP_010259314.1| PREDICTED: RNA pseudouridine synthase 1 [Nelumbo nucifera]
            gi|720010654|ref|XP_010259315.1| PREDICTED: RNA
            pseudouridine synthase 1 [Nelumbo nucifera]
          Length = 402

 Score =  454 bits (1169), Expect = e-125
 Identities = 234/355 (65%), Positives = 281/355 (79%), Gaps = 5/355 (1%)
 Frame = -1

Query: 1265 SPYIPIHFSIKIPLSSST-IRFLCK--PFSLSIMAGKPQFVSAEIDDPNS-SKTPNFPIP 1098
            SPY+     IK P   ST +R LC   P    IMA +    SA+  DPN  +KT N+PIP
Sbjct: 43   SPYL-FFLRIKNPFKPSTAVRSLCNISPPPNRIMAYRSHPDSAKEGDPNGENKTVNYPIP 101

Query: 1097 VSPPLPQISKDIELRRAMTASAKSSLFAISRTEIAFEDEFLIVVNKPSGIYCESVLSSIP 918
            +SPPLP ISK +EL RAM+AS+KSSLF++S +++ FEDE+LIVVNKP GIYCESVL+S+P
Sbjct: 102  LSPPLPAISKQMELARAMSASSKSSLFSLSLSDVLFEDEWLIVVNKPQGIYCESVLASVP 161

Query: 917  HLLNTRSNSTEMGNDFMQPPELHLANRLDRDTSGVMIITKSHKVAGKLVKAFTDHKVKKT 738
             L +  ++S+ + N+   P ELHLANRLDRDTSGVM+ITKSHK+AGKLVKAFTDHKV KT
Sbjct: 162  RLWSNSTDSSTLRNE-SNPLELHLANRLDRDTSGVMVITKSHKIAGKLVKAFTDHKVSKT 220

Query: 737  YLALCIGTAPKWQKTSIKSGHGRSKFGVWRVYSASDVSRSLPGGSIVRDMVTSFEVLAIN 558
            Y+ LCIG APKW+  SIKSGHGRSKFG WRVY+ASDV R+LPGGS+VRDM TSFEVL++N
Sbjct: 221  YVVLCIGAAPKWETISIKSGHGRSKFGAWRVYAASDVGRTLPGGSVVRDMATSFEVLSVN 280

Query: 557  GQGHFKEPIKYA-DDIETLLVEGRGTTNEDDNEKKDEILIRAYPKSGRTHQIRLHCQYLG 381
            GQG+F+EP K+   + E  LVE RG +  +D +KKDE+LIRAYPK+GRTHQIRLHCQYL 
Sbjct: 281  GQGNFREPTKHTISEEEFQLVEERGVSLSND-DKKDEMLIRAYPKNGRTHQIRLHCQYLR 339

Query: 380  IPIRGDVKYEGVHEWRGTTYDTHALHAESLSLDHPVTGAPIEFFAPLPVWASEAF 216
            IPIRGDVKYEGV+EWRG  +D HALHAESLS  HPVTG P+E  APLP+WA +AF
Sbjct: 340  IPIRGDVKYEGVYEWRGQMFDGHALHAESLSFSHPVTGLPVEVKAPLPLWAEQAF 394


>ref|XP_009373279.1| PREDICTED: RNA pseudouridine synthase 1-like [Pyrus x bretschneideri]
          Length = 349

 Score =  424 bits (1091), Expect = e-116
 Identities = 214/345 (62%), Positives = 266/345 (77%), Gaps = 7/345 (2%)
 Frame = -1

Query: 1226 LSSSTIRFLCKPFSLSIMAGKPQFVSAEIDDPNSS-----KTP-NFPIPVSPPLPQISKD 1065
            LS      L  P +   ++ +   +SA  D  N S     +TP N+P+P+SPPLP ISK 
Sbjct: 8    LSPQPPTVLFAPKAFVFLSRRRATMSAPHDAANPSSQDALQTPVNYPVPLSPPLPAISKH 67

Query: 1064 IELRRAMTASAKSSLFAISRTEIAFEDEFLIVVNKPSGIYCESVLSSIPHLLNTRSNSTE 885
            IEL RAM+AS+KSSLF++SR ++ +EDE+LIVVNKP G+YCESVL S+P LL   + S  
Sbjct: 68   IELARAMSASSKSSLFSLSRNDVVYEDEWLIVVNKPQGVYCESVLESVPQLLCDSAES-- 125

Query: 884  MGNDFMQPPELHLANRLDRDTSGVMIITKSHKVAGKLVKAFTDHKVKKTYLALCIGTAPK 705
            +       PELHLANRLDRDTSG+MIITKSHKVA KLVKAFTDHKV KTY+A C+G+APK
Sbjct: 126  VAETPTNQPELHLANRLDRDTSGLMIITKSHKVAAKLVKAFTDHKVSKTYIARCLGSAPK 185

Query: 704  WQKTSIKSGHGRSKFGVWRVYSASDVSRSLPGGSIVRDMVTSFEVLAINGQGHFKEPIKY 525
            W++ ++KSGHGRSKFG WRVY+ASDV R+LPGGS+VRDM TSFE+L++NGQG ++EP ++
Sbjct: 186  WERITLKSGHGRSKFGAWRVYAASDVGRTLPGGSMVRDMETSFEILSVNGQGSYEEPSEF 245

Query: 524  -ADDIETLLVEGRGTTNEDDNEKKDEILIRAYPKSGRTHQIRLHCQYLGIPIRGDVKYEG 348
              D+   ++VE +     D + KKDEIL+RA P SGRTHQIRLHCQYLGI IRGDVKYEG
Sbjct: 246  KKDEANVVVVEEKAVI--DGDAKKDEILVRARPMSGRTHQIRLHCQYLGISIRGDVKYEG 303

Query: 347  VHEWRGTTYDTHALHAESLSLDHPVTGAPIEFFAPLPVWASEAFQ 213
            V+EW+GTTYD+H LHAESLSL+HPVTG P+ F AP+P WAS+A Q
Sbjct: 304  VYEWKGTTYDSHELHAESLSLEHPVTGLPVMFRAPVPSWASQALQ 348


>ref|XP_008359854.1| PREDICTED: RNA pseudouridine synthase 1-like [Malus domestica]
          Length = 349

 Score =  422 bits (1086), Expect = e-115
 Identities = 212/345 (61%), Positives = 265/345 (76%), Gaps = 7/345 (2%)
 Frame = -1

Query: 1226 LSSSTIRFLCKPFSLSIMAGKPQFVSAEIDDPNSS-----KTP-NFPIPVSPPLPQISKD 1065
            LS      L  P +   ++ +   +SA+ D  N S     +TP N+P+P+SPPLP ISK 
Sbjct: 8    LSPQPAMVLYAPKAYVFLSRRRXTMSAQHDAANPSSQXALQTPGNYPVPLSPPLPAISKH 67

Query: 1064 IELRRAMTASAKSSLFAISRTEIAFEDEFLIVVNKPSGIYCESVLSSIPHLLNTRSNSTE 885
            IEL RAM+AS+KS LF++SR ++ +EDE+LIVVNKP G+YCESVL S+P LL   + S  
Sbjct: 68   IELARAMSASSKSGLFSLSRNDVVYEDEWLIVVNKPQGVYCESVLESVPQLLCDSAES-- 125

Query: 884  MGNDFMQPPELHLANRLDRDTSGVMIITKSHKVAGKLVKAFTDHKVKKTYLALCIGTAPK 705
            +     + PELHLANRLDRDTSG+MIITKSHKVA KLVKAFTDHKV KTY+A C+G+APK
Sbjct: 126  VAETRTKQPELHLANRLDRDTSGLMIITKSHKVAAKLVKAFTDHKVSKTYIARCVGSAPK 185

Query: 704  WQKTSIKSGHGRSKFGVWRVYSASDVSRSLPGGSIVRDMVTSFEVLAINGQGHFKEPIKY 525
            W++ ++KSGHGRSKFG WRVY+ASDV R+LPGGS+VRDM T FE+L+ NGQG ++EP ++
Sbjct: 186  WERITLKSGHGRSKFGAWRVYAASDVGRTLPGGSMVRDMETXFEILSXNGQGSYREPSEF 245

Query: 524  -ADDIETLLVEGRGTTNEDDNEKKDEILIRAYPKSGRTHQIRLHCQYLGIPIRGDVKYEG 348
              D+   ++VE +     D + KKDEIL+RA P+SGRTHQIRLHCQYLGI IRGDVKYEG
Sbjct: 246  KKDEANVVVVEEKAVI--DGDAKKDEILVRARPRSGRTHQIRLHCQYLGISIRGDVKYEG 303

Query: 347  VHEWRGTTYDTHALHAESLSLDHPVTGAPIEFFAPLPVWASEAFQ 213
            V+EW+GTTYD H LHAESLSL+HPVTG P+ F AP+P WAS+A Q
Sbjct: 304  VYEWKGTTYDGHELHAESLSLEHPVTGLPVMFRAPVPSWASQALQ 348


>ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prunus persica]
            gi|462401230|gb|EMJ06787.1| hypothetical protein
            PRUPE_ppa008866mg [Prunus persica]
          Length = 316

 Score =  421 bits (1082), Expect = e-115
 Identities = 206/318 (64%), Positives = 254/318 (79%), Gaps = 2/318 (0%)
 Frame = -1

Query: 1160 QFVSAEIDDPNSSKTP-NFPIPVSPPLPQISKDIELRRAMTASAKSSLFAISRTEIAFED 984
            QF +      N+ +T  N+P+P+SPPLP ISK IEL RAM+AS+KSSLF++SR ++ FED
Sbjct: 4    QFDAINPSSQNALQTSQNYPVPLSPPLPPISKHIELARAMSASSKSSLFSLSRDDVVFED 63

Query: 983  EFLIVVNKPSGIYCESVLSSIPHLLNTRSNSTEMGNDFMQPPELHLANRLDRDTSGVMII 804
            ++LIVVNKP G+YCESVL S+P LL   + S    N      ELHLANRLDRDTSG+M+I
Sbjct: 64   QWLIVVNKPQGVYCESVLESVPQLLCDSAESGTPANQL----ELHLANRLDRDTSGLMVI 119

Query: 803  TKSHKVAGKLVKAFTDHKVKKTYLALCIGTAPKWQKTSIKSGHGRSKFGVWRVYSASDVS 624
            TKSHKVA KLVKAFTDHK+ KTY+A CIG+APKW++ ++KSGHGRSKFG WRVY+ASDV 
Sbjct: 120  TKSHKVASKLVKAFTDHKISKTYIARCIGSAPKWERITLKSGHGRSKFGAWRVYAASDVG 179

Query: 623  RSLPGGSIVRDMVTSFEVLAINGQGHFKEPIKY-ADDIETLLVEGRGTTNEDDNEKKDEI 447
            R+LPGGS+VRDM TSFEVL+INGQG  KEP ++  D+  T++V+ +   ++D   KKDEI
Sbjct: 180  RTLPGGSMVRDMETSFEVLSINGQGSLKEPSEFKKDEANTIVVQEKAVIDKD--TKKDEI 237

Query: 446  LIRAYPKSGRTHQIRLHCQYLGIPIRGDVKYEGVHEWRGTTYDTHALHAESLSLDHPVTG 267
            L+RA P+SGRTHQIRLHCQYLGI IRGDVKYEGV+EW+G TYD H LHAESLS +HP+TG
Sbjct: 238  LVRARPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGRTYDGHELHAESLSFEHPITG 297

Query: 266  APIEFFAPLPVWASEAFQ 213
             P+ F AP+P WAS+A Q
Sbjct: 298  LPVMFQAPVPSWASQALQ 315


>ref|XP_011466146.1| PREDICTED: RNA pseudouridine synthase 1 isoform X3 [Fragaria vesca
            subsp. vesca]
          Length = 352

 Score =  418 bits (1075), Expect = e-114
 Identities = 204/313 (65%), Positives = 248/313 (79%), Gaps = 4/313 (1%)
 Frame = -1

Query: 1139 DDPNSSK----TPNFPIPVSPPLPQISKDIELRRAMTASAKSSLFAISRTEIAFEDEFLI 972
            D P+S      + N+P+P+SPPLP ISK++EL RAM+AS+KSSLF +SR ++ +ED++LI
Sbjct: 41   DQPSSQNALQISQNYPVPLSPPLPLISKNMELARAMSASSKSSLFTLSRNDVVYEDQWLI 100

Query: 971  VVNKPSGIYCESVLSSIPHLLNTRSNSTEMGNDFMQPPELHLANRLDRDTSGVMIITKSH 792
            VVNKP GIYCE+VL S+P LL   +   E      + PE+HLANRLDRDTSGVMIITKSH
Sbjct: 101  VVNKPQGIYCETVLESVPKLLAESAAGLEG-----KAPEIHLANRLDRDTSGVMIITKSH 155

Query: 791  KVAGKLVKAFTDHKVKKTYLALCIGTAPKWQKTSIKSGHGRSKFGVWRVYSASDVSRSLP 612
            KVA KLVKAFTDHKV KTY+A CIG+APKW++ ++KSGHGRSKFG WRVY+ASDV R LP
Sbjct: 156  KVAAKLVKAFTDHKVSKTYIACCIGSAPKWERITVKSGHGRSKFGAWRVYAASDVGRPLP 215

Query: 611  GGSIVRDMVTSFEVLAINGQGHFKEPIKYADDIETLLVEGRGTTNEDDNEKKDEILIRAY 432
            GGS+VRDM TSFE+L+INGQG F+EP ++  D + +LV        D + KKDEIL+ A 
Sbjct: 216  GGSVVRDMETSFEILSINGQGCFREPSEFRIDDDKILVVEEKAVIIDGDAKKDEILVIAR 275

Query: 431  PKSGRTHQIRLHCQYLGIPIRGDVKYEGVHEWRGTTYDTHALHAESLSLDHPVTGAPIEF 252
            P+SGRTHQIRLHCQYLGI IRGDVKYEGV+EW+GTTY  H LHAES+SLDHP+TG PI F
Sbjct: 276  PRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGTTYGGHELHAESMSLDHPITGLPILF 335

Query: 251  FAPLPVWASEAFQ 213
             APLP WA++  Q
Sbjct: 336  RAPLPSWANQLIQ 348


>ref|XP_011466144.1| PREDICTED: RNA pseudouridine synthase 1 isoform X1 [Fragaria vesca
            subsp. vesca]
          Length = 375

 Score =  418 bits (1075), Expect = e-114
 Identities = 204/314 (64%), Positives = 249/314 (79%), Gaps = 4/314 (1%)
 Frame = -1

Query: 1139 DDPNSSK----TPNFPIPVSPPLPQISKDIELRRAMTASAKSSLFAISRTEIAFEDEFLI 972
            D P+S      + N+P+P+SPPLP ISK++EL RAM+AS+KSSLF +SR ++ +ED++LI
Sbjct: 41   DQPSSQNALQISQNYPVPLSPPLPLISKNMELARAMSASSKSSLFTLSRNDVVYEDQWLI 100

Query: 971  VVNKPSGIYCESVLSSIPHLLNTRSNSTEMGNDFMQPPELHLANRLDRDTSGVMIITKSH 792
            VVNKP GIYCE+VL S+P LL   +   E      + PE+HLANRLDRDTSGVMIITKSH
Sbjct: 101  VVNKPQGIYCETVLESVPKLLAESAAGLEG-----KAPEIHLANRLDRDTSGVMIITKSH 155

Query: 791  KVAGKLVKAFTDHKVKKTYLALCIGTAPKWQKTSIKSGHGRSKFGVWRVYSASDVSRSLP 612
            KVA KLVKAFTDHKV KTY+A CIG+APKW++ ++KSGHGRSKFG WRVY+ASDV R LP
Sbjct: 156  KVAAKLVKAFTDHKVSKTYIACCIGSAPKWERITVKSGHGRSKFGAWRVYAASDVGRPLP 215

Query: 611  GGSIVRDMVTSFEVLAINGQGHFKEPIKYADDIETLLVEGRGTTNEDDNEKKDEILIRAY 432
            GGS+VRDM TSFE+L+INGQG F+EP ++  D + +LV        D + KKDEIL+ A 
Sbjct: 216  GGSVVRDMETSFEILSINGQGCFREPSEFRIDDDKILVVEEKAVIIDGDAKKDEILVIAR 275

Query: 431  PKSGRTHQIRLHCQYLGIPIRGDVKYEGVHEWRGTTYDTHALHAESLSLDHPVTGAPIEF 252
            P+SGRTHQIRLHCQYLGI IRGDVKYEGV+EW+GTTY  H LHAES+SLDHP+TG PI F
Sbjct: 276  PRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGTTYGGHELHAESMSLDHPITGLPILF 335

Query: 251  FAPLPVWASEAFQT 210
             APLP WA++  +T
Sbjct: 336  RAPLPSWANQGAKT 349


>ref|XP_011466145.1| PREDICTED: RNA pseudouridine synthase 1 isoform X2 [Fragaria vesca
            subsp. vesca]
          Length = 373

 Score =  417 bits (1072), Expect = e-114
 Identities = 205/314 (65%), Positives = 250/314 (79%), Gaps = 4/314 (1%)
 Frame = -1

Query: 1139 DDPNSSK----TPNFPIPVSPPLPQISKDIELRRAMTASAKSSLFAISRTEIAFEDEFLI 972
            D P+S      + N+P+P+SPPLP ISK++EL RAM+AS+KSSLF +SR ++ +ED++LI
Sbjct: 41   DQPSSQNALQISQNYPVPLSPPLPLISKNMELARAMSASSKSSLFTLSRNDVVYEDQWLI 100

Query: 971  VVNKPSGIYCESVLSSIPHLLNTRSNSTEMGNDFMQPPELHLANRLDRDTSGVMIITKSH 792
            VVNKP GIYCE+VL S+P LL       E G +  + PE+HLANRLDRDTSGVMIITKSH
Sbjct: 101  VVNKPQGIYCETVLESVPKLL------AESGLEG-KAPEIHLANRLDRDTSGVMIITKSH 153

Query: 791  KVAGKLVKAFTDHKVKKTYLALCIGTAPKWQKTSIKSGHGRSKFGVWRVYSASDVSRSLP 612
            KVA KLVKAFTDHKV KTY+A CIG+APKW++ ++KSGHGRSKFG WRVY+ASDV R LP
Sbjct: 154  KVAAKLVKAFTDHKVSKTYIACCIGSAPKWERITVKSGHGRSKFGAWRVYAASDVGRPLP 213

Query: 611  GGSIVRDMVTSFEVLAINGQGHFKEPIKYADDIETLLVEGRGTTNEDDNEKKDEILIRAY 432
            GGS+VRDM TSFE+L+INGQG F+EP ++  D + +LV        D + KKDEIL+ A 
Sbjct: 214  GGSVVRDMETSFEILSINGQGCFREPSEFRIDDDKILVVEEKAVIIDGDAKKDEILVIAR 273

Query: 431  PKSGRTHQIRLHCQYLGIPIRGDVKYEGVHEWRGTTYDTHALHAESLSLDHPVTGAPIEF 252
            P+SGRTHQIRLHCQYLGI IRGDVKYEGV+EW+GTTY  H LHAES+SLDHP+TG PI F
Sbjct: 274  PRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGTTYGGHELHAESMSLDHPITGLPILF 333

Query: 251  FAPLPVWASEAFQT 210
             APLP WA++  +T
Sbjct: 334  RAPLPSWANQGAKT 347


>ref|XP_008245928.1| PREDICTED: RNA pseudouridine synthase 1 [Prunus mume]
          Length = 318

 Score =  417 bits (1072), Expect = e-114
 Identities = 206/319 (64%), Positives = 256/319 (80%), Gaps = 5/319 (1%)
 Frame = -1

Query: 1154 VSAEIDDPNSSK----TPNFPIPVSPPLPQISKDIELRRAMTASAKSSLFAISRTEIAFE 987
            V ++  +P+S      + N+P+P+SPPLP ISK IEL RAM+AS+KSSLF++SR ++ FE
Sbjct: 3    VQSDAINPSSQNALQISQNYPVPLSPPLPPISKHIELARAMSASSKSSLFSLSRDDVVFE 62

Query: 986  DEFLIVVNKPSGIYCESVLSSIPHLLNTRSNSTEMGNDFMQPPELHLANRLDRDTSGVMI 807
            D++LIVVNKP G+YCESVL S+P LL   + S   G    Q  ELHLANRLDRDTSG+M+
Sbjct: 63   DQWLIVVNKPQGVYCESVLESVPQLLCDSAESVA-GTPANQL-ELHLANRLDRDTSGLMV 120

Query: 806  ITKSHKVAGKLVKAFTDHKVKKTYLALCIGTAPKWQKTSIKSGHGRSKFGVWRVYSASDV 627
            ITKSHKVA KLVKAFTDHK+ KTY+A CIG+APKW++ ++KSGHGRSKFG WRVY+ASDV
Sbjct: 121  ITKSHKVASKLVKAFTDHKISKTYIARCIGSAPKWERITLKSGHGRSKFGAWRVYAASDV 180

Query: 626  SRSLPGGSIVRDMVTSFEVLAINGQGHFKEPIKY-ADDIETLLVEGRGTTNEDDNEKKDE 450
             R+LPGGS+VRDM TSFEVL+INGQG  KEP ++  D+  T++V+ +   ++D   KKDE
Sbjct: 181  GRTLPGGSMVRDMETSFEVLSINGQGSLKEPSEFKKDEANTVVVQEKAVIDKD--TKKDE 238

Query: 449  ILIRAYPKSGRTHQIRLHCQYLGIPIRGDVKYEGVHEWRGTTYDTHALHAESLSLDHPVT 270
            IL+RA P+SGRTHQIRLHCQYLGI IRGDVKYEGV+EW+G TYD H LHAESLS +HP+T
Sbjct: 239  ILVRARPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGRTYDGHELHAESLSFEHPIT 298

Query: 269  GAPIEFFAPLPVWASEAFQ 213
            G P+ F AP+P WAS+A Q
Sbjct: 299  GLPVMFQAPVPSWASQALQ 317


>ref|XP_009414384.1| PREDICTED: RNA pseudouridine synthase 1 [Musa acuminata subsp.
            malaccensis]
          Length = 350

 Score =  417 bits (1071), Expect = e-113
 Identities = 204/348 (58%), Positives = 260/348 (74%), Gaps = 3/348 (0%)
 Frame = -1

Query: 1256 IPIHFSIKIPLSSSTIRFLCKPFSLSIMAG--KPQFVSAEIDDPNSSKTPNFPIPVSPPL 1083
            IP H +  +   S  +R +  P SL  MA        S   D P    + N+P P+SPP 
Sbjct: 4    IPFHTNRVLCFQSQALRLIHSPPSLRSMAALSTKDPGSGTSDGPAEVLSGNYPTPLSPPY 63

Query: 1082 PQISKDIELRRAMTASAKSSLFAISRTEIAFEDEFLIVVNKPSGIYCESVLSSIPHLLNT 903
            P +SK++EL RAM+A+A+S  +A+S  +I FED++L+V NKPSG+YCE++LSS+      
Sbjct: 64   PPLSKNVELHRAMSAAARSGEYALSAADIVFEDQYLVVANKPSGVYCEAILSSL------ 117

Query: 902  RSNSTEMGNDFMQPPELHLANRLDRDTSGVMIITKSHKVAGKLVKAFTDHKVKKTYLALC 723
               S+ +G+  ++P E HLANRLDRDTSG+M+ITKSHK AG+LVKAFTDHKVKKTYLALC
Sbjct: 118  ---SSSLGSVIVKP-EFHLANRLDRDTSGLMVITKSHKAAGRLVKAFTDHKVKKTYLALC 173

Query: 722  IGTAPKWQKTSIKSGHGRSKFGVWRVYSASDVSRSLPGGSIVRDMVTSFEVLAINGQGHF 543
            IG AP W K  I SGHGRSKFG WRVYS  ++ R+LPGGS+V++MVTSFEVL +NG+G F
Sbjct: 174  IGYAPDWNKIRIISGHGRSKFGAWRVYSTEEIGRTLPGGSMVKNMVTSFEVLFVNGKGKF 233

Query: 542  KEPIKY-ADDIETLLVEGRGTTNEDDNEKKDEILIRAYPKSGRTHQIRLHCQYLGIPIRG 366
            +EPI +  +D+E+++V+     + DD +K D+ILIRAYP+SGRTHQIRLHCQYLGIPIRG
Sbjct: 234  REPIDHKVNDVESVVVQKEAERSIDDGKKSDQILIRAYPQSGRTHQIRLHCQYLGIPIRG 293

Query: 365  DVKYEGVHEWRGTTYDTHALHAESLSLDHPVTGAPIEFFAPLPVWASE 222
            DVKY G HEW+G TYDTHALHAESLS +HP+TG P+   APLP+WASE
Sbjct: 294  DVKYGGFHEWKGITYDTHALHAESLSFEHPITGMPVRIQAPLPLWASE 341


>gb|KDO81689.1| hypothetical protein CISIN_1g018524mg [Citrus sinensis]
            gi|641863003|gb|KDO81690.1| hypothetical protein
            CISIN_1g018524mg [Citrus sinensis]
            gi|641863004|gb|KDO81691.1| hypothetical protein
            CISIN_1g018524mg [Citrus sinensis]
          Length = 354

 Score =  413 bits (1062), Expect = e-112
 Identities = 205/319 (64%), Positives = 250/319 (78%), Gaps = 9/319 (2%)
 Frame = -1

Query: 1136 DPNSSKTP----NFPIPVSPPLPQISKDIELRRAMTASAKSSLFAISRTEIAFEDEFLIV 969
            +P S   P    N+P P+SPPLP ISKDIEL RAM+AS+KSSL+ +SR+++ +EDE+L+ 
Sbjct: 36   EPTSQNAPQTQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYEDEWLVA 95

Query: 968  VNKPSGIYCESVLSSIPHLLNTRSNSTEMGN----DFMQPPELHLANRLDRDTSGVMIIT 801
            VNKP G+YCESVL+S+P LL   S  ++ G       +   ELHLANRLDRDTSGVM+IT
Sbjct: 96   VNKPQGVYCESVLASVPCLLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGVMVIT 155

Query: 800  KSHKVAGKLVKAFTDHKVKKTYLALCIGTAPKWQKTSIKSGHGRSKFGVWRVYSASDVSR 621
            KSHKVA KLVKAFTDHKV KTY+ALCIG APKW++ +I SGHGRSKFG WRVY+ASDV R
Sbjct: 156  KSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAASDVGR 215

Query: 620  SLPGGSIVRDMVTSFEVLAINGQGHFKEPIKYADDIE-TLLVEGRGTTNEDDNEKKDEIL 444
             LPGGS+VRDMVTSFEVL++NG+G FKEP +  +  E  ++VE +   + D   KK+EIL
Sbjct: 216  VLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEHEENNIVVEKKAVLDAD--AKKNEIL 273

Query: 443  IRAYPKSGRTHQIRLHCQYLGIPIRGDVKYEGVHEWRGTTYDTHALHAESLSLDHPVTGA 264
            +RA+P+SGRTHQIRLHCQYLGI IRGDVKYEGV+EW G  YD H LHAESLS DHPVTG 
Sbjct: 274  VRAFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSFDHPVTGC 333

Query: 263  PIEFFAPLPVWASEAFQTT 207
            P+   APLP+W +EA Q++
Sbjct: 334  PVMVQAPLPLWGTEALQSS 352


>ref|XP_007031140.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
            gi|508719745|gb|EOY11642.1| Pseudouridine synthase family
            protein isoform 1 [Theobroma cacao]
          Length = 345

 Score =  413 bits (1062), Expect = e-112
 Identities = 212/334 (63%), Positives = 257/334 (76%), Gaps = 3/334 (0%)
 Frame = -1

Query: 1205 FLCKPFSLSIMAGKPQFVSAEID-DPNSSKTPNFPIPVSPPLPQISKDIELRRAMTASAK 1029
            FLC P  LS       F+  ++  +PNS +  N+P P+SPPLP ISKDIEL RAMTAS+K
Sbjct: 12   FLCCPKLLSKFPKTLLFLCPKMSTNPNSHQ--NYPTPLSPPLPSISKDIELARAMTASSK 69

Query: 1028 SSLFAISRTEIAFEDEFLIVVNKPSGIYCESVLSSIPHLLNTRSNSTEMGNDFMQPP-EL 852
            SSLF +SR++I +EDE+LI VNKP GIYC+SVL+SIP  L+  + S  + +     P EL
Sbjct: 70   SSLFELSRSDILYEDEWLIAVNKPQGIYCDSVLASIPRFLSDSTVSDRLSDGNQASPFEL 129

Query: 851  HLANRLDRDTSGVMIITKSHKVAGKLVKAFTDHKVKKTYLALCIGTAPKWQKTSIKSGHG 672
            HLANRLDRDTSG+M+ITKSHKVA  LVKAFT+H V KTY+A CIG+APK ++ +IKSGHG
Sbjct: 130  HLANRLDRDTSGIMVITKSHKVAAALVKAFTNHMVHKTYVAFCIGSAPKSERITIKSGHG 189

Query: 671  RSKFGVWRVYSASDVSRSLPGGSIVRDMVTSFEVLAINGQGHFKEPIKYADDIET-LLVE 495
            RSKFG WRVY+A DV R LPGGSIVRDM T+FEVL+INGQ  +KEP +   D ET ++VE
Sbjct: 190  RSKFGAWRVYAAGDVGRKLPGGSIVRDMGTTFEVLSINGQQSYKEPSESVKDEETSVIVE 249

Query: 494  GRGTTNEDDNEKKDEILIRAYPKSGRTHQIRLHCQYLGIPIRGDVKYEGVHEWRGTTYDT 315
             +   + D   +KDEIL+RA+P+SGRTHQIRLHCQYLGIPIRGDVKYEGV+EW+G  YD 
Sbjct: 250  EKAVIDVD--AQKDEILVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWKGRRYDA 307

Query: 314  HALHAESLSLDHPVTGAPIEFFAPLPVWASEAFQ 213
            H LHAESLS  HPVTG P+   APLP+WAS+A Q
Sbjct: 308  HELHAESLSFQHPVTGFPVMIQAPLPLWASQALQ 341


>ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like [Citrus sinensis]
          Length = 324

 Score =  413 bits (1061), Expect = e-112
 Identities = 204/319 (63%), Positives = 252/319 (78%), Gaps = 9/319 (2%)
 Frame = -1

Query: 1136 DPNSSKTP----NFPIPVSPPLPQISKDIELRRAMTASAKSSLFAISRTEIAFEDEFLIV 969
            +P S   P    N+P P+SPPLP ISKDIEL RAM+AS+KSSL+ +SR+++ +EDE+L+ 
Sbjct: 6    EPTSQNAPQTQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYEDEWLVA 65

Query: 968  VNKPSGIYCESVLSSIPHLLNTRSNSTEMGN----DFMQPPELHLANRLDRDTSGVMIIT 801
            VNKP G+YCESVL+S+P LL   S  ++ G       +   ELHLANRLDRDTSGVM+IT
Sbjct: 66   VNKPQGVYCESVLASVPCLLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGVMVIT 125

Query: 800  KSHKVAGKLVKAFTDHKVKKTYLALCIGTAPKWQKTSIKSGHGRSKFGVWRVYSASDVSR 621
            KSHKVA KLVKAFTDHKV KTY+ALCIG APKW++ +I SGHGRSKFG WRVY+ASDV R
Sbjct: 126  KSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAASDVGR 185

Query: 620  SLPGGSIVRDMVTSFEVLAINGQGHFKEPIKYADDIE-TLLVEGRGTTNEDDNEKKDEIL 444
             LPGGS+VRDMVTSFEVL++NG+G FKEP +  +D E  ++VE +   + D   KK+EIL
Sbjct: 186  VLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEDEENNIVVEKKAVLDAD--AKKNEIL 243

Query: 443  IRAYPKSGRTHQIRLHCQYLGIPIRGDVKYEGVHEWRGTTYDTHALHAESLSLDHPVTGA 264
            +R +P+SGRTHQIRLHCQYLGI IRGDVKYEGV+EW G  YD H LHAESLSL+HP+TG 
Sbjct: 244  VRVFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSLEHPITGC 303

Query: 263  PIEFFAPLPVWASEAFQTT 207
            P+   APLP+WA++A Q++
Sbjct: 304  PVMVQAPLPLWATQAPQSS 322


>ref|XP_011023769.1| PREDICTED: RNA pseudouridine synthase 1 [Populus euphratica]
          Length = 316

 Score =  411 bits (1056), Expect = e-112
 Identities = 204/317 (64%), Positives = 255/317 (80%), Gaps = 6/317 (1%)
 Frame = -1

Query: 1154 VSAEIDDPN--SSKTP----NFPIPVSPPLPQISKDIELRRAMTASAKSSLFAISRTEIA 993
            +SA  D  N  S  TP    N+PIP+SPPL  +SK++EL RAM+AS++SSLFA+S++++ 
Sbjct: 1    MSASQDSMNATSQNTPINLQNYPIPLSPPLNPLSKEMELARAMSASSRSSLFALSKSDVL 60

Query: 992  FEDEFLIVVNKPSGIYCESVLSSIPHLLNTRSNSTEMGNDFMQPPELHLANRLDRDTSGV 813
            ++D++LI VNKP G+YCE+VL S+P +L+    S+ +    +  PELHLANRLDRDTSGV
Sbjct: 61   YQDKWLIAVNKPQGVYCETVLDSVPQVLDCLVESSGLDEGPVARPELHLANRLDRDTSGV 120

Query: 812  MIITKSHKVAGKLVKAFTDHKVKKTYLALCIGTAPKWQKTSIKSGHGRSKFGVWRVYSAS 633
            M+ITK HKVA KLVKAFTDHKV+KTY+ALCIG+APKW+K +IKSGHGRSKFG +RVY+AS
Sbjct: 121  MVITKLHKVASKLVKAFTDHKVRKTYIALCIGSAPKWEKITIKSGHGRSKFGAFRVYAAS 180

Query: 632  DVSRSLPGGSIVRDMVTSFEVLAINGQGHFKEPIKYADDIETLLVEGRGTTNEDDNEKKD 453
            DV RSLPGGS V+ M TSFEVL+INGQG F+EP ++  D   L+VE +     D + KKD
Sbjct: 181  DVGRSLPGGSTVKHMETSFEVLSINGQGSFREPSEFNSD-NILVVEEKAVI--DTDAKKD 237

Query: 452  EILIRAYPKSGRTHQIRLHCQYLGIPIRGDVKYEGVHEWRGTTYDTHALHAESLSLDHPV 273
            EIL+RA+P+SGRTHQIRLH QYLGIPIRGDVKYEGV EW+G TYD H LHAESLSL+HPV
Sbjct: 238  EILVRAFPRSGRTHQIRLHSQYLGIPIRGDVKYEGVCEWKGRTYDGHELHAESLSLEHPV 297

Query: 272  TGAPIEFFAPLPVWASE 222
            TG P+ F AP+PVWA++
Sbjct: 298  TGQPLMFRAPMPVWATQ 314


>ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223548464|gb|EEF49955.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 321

 Score =  410 bits (1054), Expect = e-111
 Identities = 200/313 (63%), Positives = 244/313 (77%), Gaps = 5/313 (1%)
 Frame = -1

Query: 1136 DPNSSKTP----NFPIPVSPPLPQISKDIELRRAMTASAKSSLFAISRTEIAFEDEFLIV 969
            +P S   P    N+P P+SPPLP ISK IEL RA++AS++SSLF +SR+++ +ED++LI 
Sbjct: 9    NPTSQNDPLTLQNYPTPLSPPLPSISKQIELARALSASSRSSLFTLSRSDVLYEDQWLIA 68

Query: 968  VNKPSGIYCESVLSSIPHLLNTRSNSTEMGNDFM-QPPELHLANRLDRDTSGVMIITKSH 792
            VNKP G+YCE+VL S+P +L   +  T+        P E HLANRLDRDTSGVM+ITKSH
Sbjct: 69   VNKPQGVYCETVLESVPRVLAASAELTDPSEGAEGNPHEFHLANRLDRDTSGVMVITKSH 128

Query: 791  KVAGKLVKAFTDHKVKKTYLALCIGTAPKWQKTSIKSGHGRSKFGVWRVYSASDVSRSLP 612
            KVA KLVKAFTDHK+KKTY+ALCIG APKW+K +IKSGHGRSKFGVWRVY+ASDV ++LP
Sbjct: 129  KVASKLVKAFTDHKIKKTYIALCIGLAPKWEKITIKSGHGRSKFGVWRVYAASDVGQTLP 188

Query: 611  GGSIVRDMVTSFEVLAINGQGHFKEPIKYADDIETLLVEGRGTTNEDDNEKKDEILIRAY 432
            GGS V+DM TSFE+L++NGQG FKE  ++  D   L+VE +   N D   KK EIL+RA+
Sbjct: 189  GGSTVKDMETSFELLSVNGQGSFKELSEFEKDENILVVEEKAAKNAD--VKKVEILVRAF 246

Query: 431  PKSGRTHQIRLHCQYLGIPIRGDVKYEGVHEWRGTTYDTHALHAESLSLDHPVTGAPIEF 252
            P+SGRTHQIRLHCQYLGI IRGDVKYEGV+EW G TYD H LHAE+LS +HPVTG P+  
Sbjct: 247  PQSGRTHQIRLHCQYLGISIRGDVKYEGVYEWEGRTYDGHELHAETLSFEHPVTGVPVML 306

Query: 251  FAPLPVWASEAFQ 213
             APLP WA +A Q
Sbjct: 307  RAPLPSWAIQASQ 319


>ref|XP_007031141.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
            gi|508719746|gb|EOY11643.1| Pseudouridine synthase family
            protein isoform 2 [Theobroma cacao]
          Length = 313

 Score =  410 bits (1053), Expect = e-111
 Identities = 205/310 (66%), Positives = 247/310 (79%), Gaps = 2/310 (0%)
 Frame = -1

Query: 1136 DPNSSKTPNFPIPVSPPLPQISKDIELRRAMTASAKSSLFAISRTEIAFEDEFLIVVNKP 957
            +PNS +  N+P P+SPPLP ISKDIEL RAMTAS+KSSLF +SR++I +EDE+LI VNKP
Sbjct: 4    NPNSHQ--NYPTPLSPPLPSISKDIELARAMTASSKSSLFELSRSDILYEDEWLIAVNKP 61

Query: 956  SGIYCESVLSSIPHLLNTRSNSTEMGNDFMQPP-ELHLANRLDRDTSGVMIITKSHKVAG 780
             GIYC+SVL+SIP  L+  + S  + +     P ELHLANRLDRDTSG+M+ITKSHKVA 
Sbjct: 62   QGIYCDSVLASIPRFLSDSTVSDRLSDGNQASPFELHLANRLDRDTSGIMVITKSHKVAA 121

Query: 779  KLVKAFTDHKVKKTYLALCIGTAPKWQKTSIKSGHGRSKFGVWRVYSASDVSRSLPGGSI 600
             LVKAFT+H V KTY+A CIG+APK ++ +IKSGHGRSKFG WRVY+A DV R LPGGSI
Sbjct: 122  ALVKAFTNHMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWRVYAAGDVGRKLPGGSI 181

Query: 599  VRDMVTSFEVLAINGQGHFKEPIKYADDIET-LLVEGRGTTNEDDNEKKDEILIRAYPKS 423
            VRDM T+FEVL+INGQ  +KEP +   D ET ++VE +   + D   +KDEIL+RA+P+S
Sbjct: 182  VRDMGTTFEVLSINGQQSYKEPSESVKDEETSVIVEEKAVIDVD--AQKDEILVRAFPRS 239

Query: 422  GRTHQIRLHCQYLGIPIRGDVKYEGVHEWRGTTYDTHALHAESLSLDHPVTGAPIEFFAP 243
            GRTHQIRLHCQYLGIPIRGDVKYEGV+EW+G  YD H LHAESLS  HPVTG P+   AP
Sbjct: 240  GRTHQIRLHCQYLGIPIRGDVKYEGVYEWKGRRYDAHELHAESLSFQHPVTGFPVMIQAP 299

Query: 242  LPVWASEAFQ 213
            LP+WAS+A Q
Sbjct: 300  LPLWASQALQ 309


>ref|XP_012476516.1| PREDICTED: RNA pseudouridine synthase 1 [Gossypium raimondii]
            gi|763758988|gb|KJB26319.1| hypothetical protein
            B456_004G236900 [Gossypium raimondii]
          Length = 349

 Score =  408 bits (1049), Expect = e-111
 Identities = 202/309 (65%), Positives = 249/309 (80%), Gaps = 3/309 (0%)
 Frame = -1

Query: 1130 NSSKTPNFPIPVSPPLPQISKDIELRRAMTASAKSSLFAISRTEIAFEDEFLIVVNKPSG 951
            NS+   N+P P+SPPLP ISKDIEL RAM+AS+KSSLF +SR++I +EDE+LI VNKP G
Sbjct: 40   NSNSLQNYPTPLSPPLPSISKDIELARAMSASSKSSLFGLSRSDILYEDEWLIAVNKPQG 99

Query: 950  IYCESVLSSIPHLLNTRSNSTEM--GNDFMQPPELHLANRLDRDTSGVMIITKSHKVAGK 777
            IYC+++L+S+P  L+  + S  +  GN      ELHLANRLDRDTSGVM+ITKSHKVA  
Sbjct: 100  IYCDTILASVPRFLSGSAPSDRLCEGNQ-ASTLELHLANRLDRDTSGVMVITKSHKVASV 158

Query: 776  LVKAFTDHKVKKTYLALCIGTAPKWQKTSIKSGHGRSKFGVWRVYSASDVSRSLPGGSIV 597
            LVKAFT+HKV+KTY+A CIG+APK ++ +IKSGHGRSKFG WRVY+A DV R LPGGSIV
Sbjct: 159  LVKAFTNHKVQKTYVAFCIGSAPKSERITIKSGHGRSKFGAWRVYAAGDVGRKLPGGSIV 218

Query: 596  RDMVTSFEVLAINGQGHFKEPIKYADDIE-TLLVEGRGTTNEDDNEKKDEILIRAYPKSG 420
            RDM T+FEVL+INGQ ++KE  +  +D E +++VE +  T+ D N  KDEIL+RA+P+SG
Sbjct: 219  RDMETTFEVLSINGQQNYKEQSECMEDEEHSIVVEEKAVTDVDAN--KDEILVRAFPRSG 276

Query: 419  RTHQIRLHCQYLGIPIRGDVKYEGVHEWRGTTYDTHALHAESLSLDHPVTGAPIEFFAPL 240
            RTHQIRLHCQYLG PIRGDVKYEGV+EW+G TYD H LHAESL+  HPVTG P+   APL
Sbjct: 277  RTHQIRLHCQYLGFPIRGDVKYEGVYEWKGRTYDAHELHAESLTFQHPVTGFPLLIQAPL 336

Query: 239  PVWASEAFQ 213
            P+WAS+A Q
Sbjct: 337  PLWASQALQ 345


>ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citrus clementina]
            gi|567881937|ref|XP_006433527.1| hypothetical protein
            CICLE_v10001637mg [Citrus clementina]
            gi|557535648|gb|ESR46766.1| hypothetical protein
            CICLE_v10001637mg [Citrus clementina]
            gi|557535649|gb|ESR46767.1| hypothetical protein
            CICLE_v10001637mg [Citrus clementina]
          Length = 357

 Score =  408 bits (1049), Expect = e-111
 Identities = 200/307 (65%), Positives = 244/307 (79%), Gaps = 5/307 (1%)
 Frame = -1

Query: 1112 NFPIPVSPPLPQISKDIELRRAMTASAKSSLFAISRTEIAFEDEFLIVVNKPSGIYCESV 933
            N+P P+SPPLP ISKDIEL RAM+AS+KSSL+ +SR+++ +EDE+ + VNKP G+YCESV
Sbjct: 51   NYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYEDEWFVAVNKPQGVYCESV 110

Query: 932  LSSIPHLLNTRSNSTEMGN----DFMQPPELHLANRLDRDTSGVMIITKSHKVAGKLVKA 765
            L+S+P  L   S  ++ G       +   ELHLANRLDRDTSGVM+ITKSHKVA KLVKA
Sbjct: 111  LASVPCFLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGVMVITKSHKVASKLVKA 170

Query: 764  FTDHKVKKTYLALCIGTAPKWQKTSIKSGHGRSKFGVWRVYSASDVSRSLPGGSIVRDMV 585
            FTDHKV KTY+ALCIG APKW++ +I SGHGRSKFG WRVY+ASDV R LPGGS+VRDMV
Sbjct: 171  FTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAASDVGRVLPGGSVVRDMV 230

Query: 584  TSFEVLAINGQGHFKEPIKYADDIE-TLLVEGRGTTNEDDNEKKDEILIRAYPKSGRTHQ 408
            TSFEVL++NG+G FKEP +  +  E  ++VE +   + D   KK+EIL+RA+P+SGRTHQ
Sbjct: 231  TSFEVLSVNGEGSFKEPSELQEHEENNIVVEKKAVLDAD--AKKNEILVRAFPRSGRTHQ 288

Query: 407  IRLHCQYLGIPIRGDVKYEGVHEWRGTTYDTHALHAESLSLDHPVTGAPIEFFAPLPVWA 228
            IRLHCQYLGI IRGDVKYEGV+EW G  YD H LHAESLS DHPVTG P+   APLP+W 
Sbjct: 289  IRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSFDHPVTGCPVMVQAPLPLWG 348

Query: 227  SEAFQTT 207
            +EA Q++
Sbjct: 349  TEALQSS 355


>emb|CDP18242.1| unnamed protein product [Coffea canephora]
          Length = 352

 Score =  405 bits (1041), Expect = e-110
 Identities = 203/333 (60%), Positives = 260/333 (78%), Gaps = 4/333 (1%)
 Frame = -1

Query: 1196 KPFSLSIMAGKPQFVSAEI---DDPNSSKTPNFPIPVSPPLPQISKDIELRRAMTASAKS 1026
            KP     MA K    S +    +DP S +  N+P+P+SPPLP ISK+IEL RA+TAS++S
Sbjct: 22   KPLRFLSMATKTHLDSIDSQVKNDPTSLQ--NYPVPLSPPLPSISKNIELNRALTASSRS 79

Query: 1025 SLFAISRTEIAFEDEFLIVVNKPSGIYCESVLSSIPHLLNTRSNSTEMGNDFMQPPELHL 846
            SLF++SR  + FED++LI +NKP GIYCE+VLS++P LL   ++ST+ G + ++  ELHL
Sbjct: 80   SLFSLSRNHVLFEDQWLIAINKPQGIYCENVLSAVPSLL---TDSTDSGTE-VKLTELHL 135

Query: 845  ANRLDRDTSGVMIITKSHKVAGKLVKAFTDHKVKKTYLALCIGTAPKWQKTSIKSGHGRS 666
            ANRLDRDTSG+MIITKSHKVA KLVKAFT+HKV+KTY+A C+G APKW   ++KSGHGRS
Sbjct: 136  ANRLDRDTSGIMIITKSHKVAAKLVKAFTEHKVRKTYIASCVGQAPKWVNITMKSGHGRS 195

Query: 665  KFGVWRVYSASDVSRSLPGGSIVRDMVTSFEVLAINGQGHFKEPIKYADDI-ETLLVEGR 489
            ++G WRVY+ASDV+++LPGGSIV+DM T FEVL++NGQG FKE  +   DI E +++E +
Sbjct: 196  RYGAWRVYAASDVAKTLPGGSIVKDMETLFEVLSVNGQGQFKEFSESGRDISEVMIIEQK 255

Query: 488  GTTNEDDNEKKDEILIRAYPKSGRTHQIRLHCQYLGIPIRGDVKYEGVHEWRGTTYDTHA 309
              +  D N KKDEIL+RAYPKSGRTHQIRLHCQYLG+PIRGDVKYEG +EW+  TYD H 
Sbjct: 256  --SEIDCNLKKDEILVRAYPKSGRTHQIRLHCQYLGMPIRGDVKYEGAYEWKERTYDGHE 313

Query: 308  LHAESLSLDHPVTGAPIEFFAPLPVWASEAFQT 210
            LHAESLS +HPVT   +   APLP+WA + F++
Sbjct: 314  LHAESLSFEHPVTAENVLIQAPLPLWACQFFES 346


>ref|XP_010105628.1| RNA pseudourine synthase 1 [Morus notabilis]
            gi|587966211|gb|EXC51319.1| RNA pseudourine synthase 1
            [Morus notabilis]
          Length = 319

 Score =  401 bits (1031), Expect = e-109
 Identities = 195/308 (63%), Positives = 241/308 (78%), Gaps = 2/308 (0%)
 Frame = -1

Query: 1130 NSSKTP-NFPIPVSPPLPQISKDIELRRAMTASAKSSLFAISRTEIAFEDEFLIVVNKPS 954
            N+ +TP N+P+P+SPP P +SKD+EL RAM+AS+KSSLF+ISR +  FEDE L+ VNKP 
Sbjct: 14   NALRTPQNYPVPLSPPPPPVSKDVELSRAMSASSKSSLFSISRNDFVFEDECLVAVNKPQ 73

Query: 953  GIYCESVLSSIPHLLNTRSNSTEMGNDFMQPPELHLANRLDRDTSGVMIITKSHKVAGKL 774
            GIYCESV  S+  +L+  S   ++  +   PPELHLANRLDRDTSG+M+ITKSHKVA KL
Sbjct: 74   GIYCESVFDSVRKVLSDSSEPGQLETE-ASPPELHLANRLDRDTSGLMLITKSHKVASKL 132

Query: 773  VKAFTDHKVKKTYLALCIGTAPKWQKTSIKSGHGRSKFGVWRVYSASDVSRSLPGGSIVR 594
            VKAFT HKV KTY+A C+G+APKW+  +IKSGHGRSKFG WRVY+ASDV R+LPGGS+VR
Sbjct: 133  VKAFTTHKVSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASDVGRTLPGGSVVR 192

Query: 593  DMVTSFEVLAINGQGHFKEPIKY-ADDIETLLVEGRGTTNEDDNEKKDEILIRAYPKSGR 417
            DM TSFEVL++NGQ   KEP ++  D    L+VE +   + D   KKDEIL+RA PKSGR
Sbjct: 193  DMETSFEVLSVNGQRVSKEPSEFRKDGNNVLIVEEKALIDRDG--KKDEILVRARPKSGR 250

Query: 416  THQIRLHCQYLGIPIRGDVKYEGVHEWRGTTYDTHALHAESLSLDHPVTGAPIEFFAPLP 237
            +HQIRLHCQYLGI +RGDVKYEGV +W+G TY+ H LHAESLS +HP+T  P+    PLP
Sbjct: 251  SHQIRLHCQYLGISLRGDVKYEGVSQWKGKTYNGHELHAESLSFEHPITSLPVVLSTPLP 310

Query: 236  VWASEAFQ 213
            +WAS+  Q
Sbjct: 311  MWASQVTQ 318


>ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like [Solanum tuberosum]
          Length = 332

 Score =  401 bits (1031), Expect = e-109
 Identities = 193/303 (63%), Positives = 238/303 (78%)
 Frame = -1

Query: 1136 DPNSSKTPNFPIPVSPPLPQISKDIELRRAMTASAKSSLFAISRTEIAFEDEFLIVVNKP 957
            D  S+ T ++P+P+SPPLP +SKDIE  RA+TAS+KS+LF++SR+ + FEDE++I VNKP
Sbjct: 38   DSPSAATTDYPVPLSPPLPALSKDIEPNRALTASSKSALFSLSRSHVIFEDEWIIAVNKP 97

Query: 956  SGIYCESVLSSIPHLLNTRSNSTEMGNDFMQPPELHLANRLDRDTSGVMIITKSHKVAGK 777
             GIYCESVLSS+P LLN    +           ELHLANRLDRDTSGVM+ITK HKVA K
Sbjct: 98   QGIYCESVLSSLPDLLNDTGANVS---------ELHLANRLDRDTSGVMLITKLHKVAAK 148

Query: 776  LVKAFTDHKVKKTYLALCIGTAPKWQKTSIKSGHGRSKFGVWRVYSASDVSRSLPGGSIV 597
             VKAFTDHKV+KTYLA C+G APKW+K ++KSGHGRSK+G WRVY+ASD  R LPGGS+V
Sbjct: 149  FVKAFTDHKVRKTYLAYCVGLAPKWEKITVKSGHGRSKYGAWRVYAASDAGRKLPGGSLV 208

Query: 596  RDMVTSFEVLAINGQGHFKEPIKYADDIETLLVEGRGTTNEDDNEKKDEILIRAYPKSGR 417
            +DM TSFEVL++NG G FKE   +  D + ++V+ +     D   KKDEIL+RA P+SGR
Sbjct: 209  KDMETSFEVLSVNGLGCFKEVSDFHKDEDVVIVQEKSVIGCD--LKKDEILVRASPRSGR 266

Query: 416  THQIRLHCQYLGIPIRGDVKYEGVHEWRGTTYDTHALHAESLSLDHPVTGAPIEFFAPLP 237
            THQIRLHCQYLGIPIRGDV+YEGV+EW+G+ YD+H LHAESLS +HP+TG P+   APLP
Sbjct: 267  THQIRLHCQYLGIPIRGDVRYEGVYEWKGSRYDSHELHAESLSFEHPITGKPMLLQAPLP 326

Query: 236  VWA 228
             WA
Sbjct: 327  SWA 329