BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00022205
         (1420 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010249185.1| PREDICTED: RNA polymerase II C-terminal doma...   124   2e-25
ref|XP_008791049.1| PREDICTED: RNA polymerase II C-terminal doma...   102   7e-19
ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphat...   102   1e-18
ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citr...    97   4e-17
ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citr...    97   4e-17
ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citr...    97   4e-17
gb|KDO83168.1| hypothetical protein CISIN_1g000897mg [Citrus sin...    96   5e-17
gb|KDO83167.1| hypothetical protein CISIN_1g000897mg [Citrus sin...    96   5e-17
gb|KDO83166.1| hypothetical protein CISIN_1g000897mg [Citrus sin...    96   5e-17
gb|KDO83165.1| hypothetical protein CISIN_1g000897mg [Citrus sin...    96   5e-17
gb|KHG21997.1| RNA polymerase II C-terminal domain phosphatase-l...    92   8e-16
ref|XP_012459417.1| PREDICTED: RNA polymerase II C-terminal doma...    92   1e-15
ref|XP_012459418.1| PREDICTED: RNA polymerase II C-terminal doma...    91   3e-15
ref|XP_010929653.1| PREDICTED: RNA polymerase II C-terminal doma...    90   5e-15
ref|XP_010100046.1| RNA polymerase II C-terminal domain phosphat...    89   8e-15
ref|XP_010656789.1| PREDICTED: RNA polymerase II C-terminal doma...    89   1e-14
ref|XP_010656786.1| PREDICTED: RNA polymerase II C-terminal doma...    89   1e-14
ref|XP_010656784.1| PREDICTED: RNA polymerase II C-terminal doma...    89   1e-14
ref|XP_011656791.1| PREDICTED: RNA polymerase II C-terminal doma...    85   2e-13
ref|XP_012088736.1| PREDICTED: RNA polymerase II C-terminal doma...    85   2e-13

>ref|XP_010249185.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Nelumbo nucifera]
          Length = 1313

 Score =  124 bits (311), Expect = 2e-25
 Identities = 100/341 (29%), Positives = 155/341 (45%), Gaps = 28/341 (8%)
 Frame = -2

Query: 960  WMNYPMTRIGNYAPDLYNLAWAQAVQSKPL---YVRGGFGS-----------AVRSNNDK 823
            W  YP+T    Y    +NLAWAQAVQ++PL   +VR  FGS            + S  D 
Sbjct: 84   WYQYPVT--SGYGSGFHNLAWAQAVQNRPLDEVFVRD-FGSDEKLVRSVSKPMINSREDN 140

Query: 822  EGEKKKGVDPGKEICSVVIXXXXXXXXXXXXXXXXXXXXXXXXXDVVMKSESPSGN---- 655
                +      KE+C+++                           VV + E   G     
Sbjct: 141  NNNNRSLNSSSKEVCNLI--------------SDDSSEEIDSKMAVVGEDEKEEGELEEG 186

Query: 654  ELSLESKEREFPSGNKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRVNMISEAFKTVTV 475
            E+ L+S+  E  SG+ +                             R+N I E  +TVTV
Sbjct: 187  EIDLDSEMVE--SGHSIEISSDGQSNAEKDLKEKEFEK--------RLNSIRECLETVTV 236

Query: 474  SNAEKSFQSTFSQLNIALESLQLLILESRLPIIDELVEEAFARVRDLHHVLCLGNSQLDE 295
              A+KSF +   ++  +LESLQ +I E+R+P +D+L+E++F  ++ ++ V C   S   +
Sbjct: 237  KEADKSFDAICFRMRTSLESLQAMISENRVPAMDDLIEQSFTGIQTINSVYC---SMTPQ 293

Query: 294  QNKQNKNELSRLFDILKKQDPAIFSPEQMKEVEGMMQSL----------AMEKEKEGNAG 145
            Q +QNK+  SRL   LK Q+P +FSP++MKE+E M++SL           + +EKE   G
Sbjct: 294  QQEQNKDIFSRLIVHLKIQEPVLFSPDRMKEIESMVRSLDCPSALSNIKVLNQEKEALVG 353

Query: 144  SGLNSKESHNVVDNVSHDLISSKEVSLEPMLEESGGNNGYN 22
               N K S  + +   + +  SK+  LEPM  + G  +  N
Sbjct: 354  VRENIKNSSILSEKAGNGVDFSKKFQLEPMPVKYGDWDNLN 394


>ref|XP_008791049.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
           [Phoenix dactylifera]
          Length = 1269

 Score =  102 bits (254), Expect = 7e-19
 Identities = 92/303 (30%), Positives = 140/303 (46%), Gaps = 9/303 (2%)
 Frame = -2

Query: 960 WMNYPMTRIGNYAPDLYNLAWAQAVQSKPLYVRGGFGSAVRSNNDKEGEKKKGVDPGKEI 781
           W+ YPM+R  NYAP+LY+ AWAQAVQ+KPL    G       + D   +   G    +E 
Sbjct: 69  WVGYPMSR--NYAPNLYSFAWAQAVQNKPL----GLDLKPVGSADPPAKSAGGKPVKEEA 122

Query: 780 CSVVIXXXXXXXXXXXXXXXXXXXXXXXXXDVVMKSESPSGNELSLESKEREFPSGNKLX 601
            +VV                          ++   SE   G  + L S ++E  S ++  
Sbjct: 123 YNVV------DSSEESGGGTEKEEGELEEGEIGFGSEPVGGEIIDLSSDKQEDGSESE-- 174

Query: 600 XXXXXXXXXXXXXXXXXXXXXXXXXXXKRVNMISEAFKTVTVSNAEKSFQSTFSQLNIAL 421
                                      +RV++I E  +TVT   AEKSF     +L  + 
Sbjct: 175 ----------EKKLLGGKETEEIGEFDRRVSLILEELETVTEEEAEKSFDGVCLRLRQSF 224

Query: 420 ESLQLLILE--SRLPIIDELVEEAFARVRDLHHVLCLGNSQLDEQNKQNKNELSRLFDIL 247
           E L+ +  E  S +P++D LV++AF  ++ +H VL    S+  ++ +QNK+ L RL   +
Sbjct: 225 EMLKPMFAETESPVPVLDALVQQAFEGIKTVHSVL---RSENLKKKEQNKDFLLRLLIHI 281

Query: 246 KKQDPAIFSPEQMKEVEGMMQSLAME----KEKEGNAGSGLNSKESHNV---VDNVSHDL 88
           K Q   I SPEQ+KE++  +QSL  E    KE +  AGSG N+ +  ++    D  S  L
Sbjct: 282 KNQYSNILSPEQVKEIDTRVQSLVFEDDSNKESKLYAGSGTNTNDKTHLPEKPDISSFGL 341

Query: 87  ISS 79
           +SS
Sbjct: 342 VSS 344


>ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
           [Theobroma cacao] gi|508707765|gb|EOX99661.1| RNA
           polymerase II C-terminal domain phosphatase-like 3,
           putative [Theobroma cacao]
          Length = 1290

 Score =  102 bits (253), Expect = 1e-18
 Identities = 89/297 (29%), Positives = 126/297 (42%), Gaps = 9/297 (3%)
 Frame = -2

Query: 951 YPMTRIGNYAPDLYNLAWAQAVQSKPLYVRGGFGSAVRSNNDKEGEKKKGVDPGKEICSV 772
           YP   I  YA  LYN AWAQAVQ+KPL     F          E +  K   P   + SV
Sbjct: 87  YPSV-IRGYASGLYNFAWAQAVQNKPL--NEIFVKDFEQPQQDENKNSKRSSPSSSVASV 143

Query: 771 VIXXXXXXXXXXXXXXXXXXXXXXXXXDVVMKSESPSGNE----LSLESKEREFPSGNKL 604
                                       VV+  +S    E    ++L+ +E E   G   
Sbjct: 144 -------------NSKEEKGSSGNLAVKVVIDDDSEDEMEEDKVVNLDKEEGELEEGE-- 188

Query: 603 XXXXXXXXXXXXXXXXXXXXXXXXXXXXKRVNMISEAFKTVTVSNAEKSFQSTFSQLNIA 424
                                       KR N+I    + VTV  AEKSF+   S+L+ A
Sbjct: 189 --IDLDSEPKEKVLSSEDGNVGNSDELEKRANLIRGVLEGVTVIEAEKSFEGVCSRLHNA 246

Query: 423 LESLQLLILESRLPIIDELVEEAFARVRDLHHVLCLGNSQLDEQNKQNKNELSRLFDILK 244
           LESL+ LILE  +P  D L++ AF  +      L   + +      QN   LSRL  I+K
Sbjct: 247 LESLRALILECSVPAKDALIQLAFGAINSAFVALNCNSKE------QNVAILSRLLSIVK 300

Query: 243 KQDPAIFSPEQMKEVEGMMQSL-----AMEKEKEGNAGSGLNSKESHNVVDNVSHDL 88
             DP++F P++MKE++ M+ SL     A++ EK+     G+N K+   + +N+ HDL
Sbjct: 301 GHDPSLFPPDKMKEIDVMLISLNSPARAIDTEKDMKVVDGVNKKDPDALPENICHDL 357


>ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
           gi|568858958|ref|XP_006483010.1| PREDICTED: RNA
           polymerase II C-terminal domain phosphatase-like 3-like
           [Citrus sinensis] gi|557541056|gb|ESR52100.1|
           hypothetical protein CICLE_v10030535mg [Citrus
           clementina]
          Length = 1234

 Score = 96.7 bits (239), Expect = 4e-17
 Identities = 60/153 (39%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
 Frame = -2

Query: 513 VNMISEAFKTVTVSNAEKSFQSTFSQLNIALESLQLLILESRLPIIDELVEEAFARVRDL 334
           V  I EA ++V     + SF+   S+L   LESL+ L+ E+ +P  D L++ AF+ V+ +
Sbjct: 176 VESIREALESVL--RGDISFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSV 233

Query: 333 HHVLCLGNSQLDEQNKQNKNELSRLFDILKKQDPAIFSPEQMKEVEGMMQSL---AMEKE 163
           H V C  N  L EQNK+    LSRL  ++K  +P +FS  Q+KE+E M+ SL   A +KE
Sbjct: 234 HSVFCSMNHVLKEQNKE---ILSRLLSVIKSHEPPLFSSNQIKEMEAMLSSLVTRANDKE 290

Query: 162 KEGNAGSGLNSKESHNVVDNVSHDLISSKEVSL 64
           K+  A  G+N K+S+ V +N  +DL   ++V L
Sbjct: 291 KDMLAMHGVNGKDSNIVTENAVNDLNFKEKVPL 323


>ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
           gi|557541054|gb|ESR52098.1| hypothetical protein
           CICLE_v10030535mg [Citrus clementina]
          Length = 1208

 Score = 96.7 bits (239), Expect = 4e-17
 Identities = 60/153 (39%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
 Frame = -2

Query: 513 VNMISEAFKTVTVSNAEKSFQSTFSQLNIALESLQLLILESRLPIIDELVEEAFARVRDL 334
           V  I EA ++V     + SF+   S+L   LESL+ L+ E+ +P  D L++ AF+ V+ +
Sbjct: 176 VESIREALESVL--RGDISFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSV 233

Query: 333 HHVLCLGNSQLDEQNKQNKNELSRLFDILKKQDPAIFSPEQMKEVEGMMQSL---AMEKE 163
           H V C  N  L EQNK+    LSRL  ++K  +P +FS  Q+KE+E M+ SL   A +KE
Sbjct: 234 HSVFCSMNHVLKEQNKE---ILSRLLSVIKSHEPPLFSSNQIKEMEAMLSSLVTRANDKE 290

Query: 162 KEGNAGSGLNSKESHNVVDNVSHDLISSKEVSL 64
           K+  A  G+N K+S+ V +N  +DL   ++V L
Sbjct: 291 KDMLAMHGVNGKDSNIVTENAVNDLNFKEKVPL 323


>ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
           gi|567892677|ref|XP_006438859.1| hypothetical protein
           CICLE_v10030535mg [Citrus clementina]
           gi|557541053|gb|ESR52097.1| hypothetical protein
           CICLE_v10030535mg [Citrus clementina]
           gi|557541055|gb|ESR52099.1| hypothetical protein
           CICLE_v10030535mg [Citrus clementina]
          Length = 1118

 Score = 96.7 bits (239), Expect = 4e-17
 Identities = 60/153 (39%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
 Frame = -2

Query: 513 VNMISEAFKTVTVSNAEKSFQSTFSQLNIALESLQLLILESRLPIIDELVEEAFARVRDL 334
           V  I EA ++V     + SF+   S+L   LESL+ L+ E+ +P  D L++ AF+ V+ +
Sbjct: 176 VESIREALESVL--RGDISFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSV 233

Query: 333 HHVLCLGNSQLDEQNKQNKNELSRLFDILKKQDPAIFSPEQMKEVEGMMQSL---AMEKE 163
           H V C  N  L EQNK+    LSRL  ++K  +P +FS  Q+KE+E M+ SL   A +KE
Sbjct: 234 HSVFCSMNHVLKEQNKE---ILSRLLSVIKSHEPPLFSSNQIKEMEAMLSSLVTRANDKE 290

Query: 162 KEGNAGSGLNSKESHNVVDNVSHDLISSKEVSL 64
           K+  A  G+N K+S+ V +N  +DL   ++V L
Sbjct: 291 KDMLAMHGVNGKDSNIVTENAVNDLNFKEKVPL 323


>gb|KDO83168.1| hypothetical protein CISIN_1g000897mg [Citrus sinensis]
           gi|641864483|gb|KDO83169.1| hypothetical protein
           CISIN_1g000897mg [Citrus sinensis]
           gi|641864484|gb|KDO83170.1| hypothetical protein
           CISIN_1g000897mg [Citrus sinensis]
          Length = 1118

 Score = 96.3 bits (238), Expect = 5e-17
 Identities = 60/153 (39%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
 Frame = -2

Query: 513 VNMISEAFKTVTVSNAEKSFQSTFSQLNIALESLQLLILESRLPIIDELVEEAFARVRDL 334
           V  I EA ++V     + SF+   S+L   LESL+ L+ E+ +P  D L++ AF+ V+ +
Sbjct: 176 VESIREALESVL--RGDISFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSV 233

Query: 333 HHVLCLGNSQLDEQNKQNKNELSRLFDILKKQDPAIFSPEQMKEVEGMMQSL---AMEKE 163
           H V C  N  L EQNK+    LSRL  ++K  +P +FS  Q+KE+E M+ SL   A +KE
Sbjct: 234 HSVFCSMNHVLKEQNKE---ILSRLLSLIKSHEPPLFSSNQIKEMEAMLSSLVTRANDKE 290

Query: 162 KEGNAGSGLNSKESHNVVDNVSHDLISSKEVSL 64
           K+  A  G+N K+S+ V +N  +DL   ++V L
Sbjct: 291 KDMLAMHGVNGKDSNIVTENAVNDLNFKEKVPL 323


>gb|KDO83167.1| hypothetical protein CISIN_1g000897mg [Citrus sinensis]
          Length = 1208

 Score = 96.3 bits (238), Expect = 5e-17
 Identities = 60/153 (39%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
 Frame = -2

Query: 513 VNMISEAFKTVTVSNAEKSFQSTFSQLNIALESLQLLILESRLPIIDELVEEAFARVRDL 334
           V  I EA ++V     + SF+   S+L   LESL+ L+ E+ +P  D L++ AF+ V+ +
Sbjct: 176 VESIREALESVL--RGDISFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSV 233

Query: 333 HHVLCLGNSQLDEQNKQNKNELSRLFDILKKQDPAIFSPEQMKEVEGMMQSL---AMEKE 163
           H V C  N  L EQNK+    LSRL  ++K  +P +FS  Q+KE+E M+ SL   A +KE
Sbjct: 234 HSVFCSMNHVLKEQNKE---ILSRLLSLIKSHEPPLFSSNQIKEMEAMLSSLVTRANDKE 290

Query: 162 KEGNAGSGLNSKESHNVVDNVSHDLISSKEVSL 64
           K+  A  G+N K+S+ V +N  +DL   ++V L
Sbjct: 291 KDMLAMHGVNGKDSNIVTENAVNDLNFKEKVPL 323


>gb|KDO83166.1| hypothetical protein CISIN_1g000897mg [Citrus sinensis]
          Length = 1218

 Score = 96.3 bits (238), Expect = 5e-17
 Identities = 60/153 (39%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
 Frame = -2

Query: 513 VNMISEAFKTVTVSNAEKSFQSTFSQLNIALESLQLLILESRLPIIDELVEEAFARVRDL 334
           V  I EA ++V     + SF+   S+L   LESL+ L+ E+ +P  D L++ AF+ V+ +
Sbjct: 176 VESIREALESVL--RGDISFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSV 233

Query: 333 HHVLCLGNSQLDEQNKQNKNELSRLFDILKKQDPAIFSPEQMKEVEGMMQSL---AMEKE 163
           H V C  N  L EQNK+    LSRL  ++K  +P +FS  Q+KE+E M+ SL   A +KE
Sbjct: 234 HSVFCSMNHVLKEQNKE---ILSRLLSLIKSHEPPLFSSNQIKEMEAMLSSLVTRANDKE 290

Query: 162 KEGNAGSGLNSKESHNVVDNVSHDLISSKEVSL 64
           K+  A  G+N K+S+ V +N  +DL   ++V L
Sbjct: 291 KDMLAMHGVNGKDSNIVTENAVNDLNFKEKVPL 323


>gb|KDO83165.1| hypothetical protein CISIN_1g000897mg [Citrus sinensis]
          Length = 1234

 Score = 96.3 bits (238), Expect = 5e-17
 Identities = 60/153 (39%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
 Frame = -2

Query: 513 VNMISEAFKTVTVSNAEKSFQSTFSQLNIALESLQLLILESRLPIIDELVEEAFARVRDL 334
           V  I EA ++V     + SF+   S+L   LESL+ L+ E+ +P  D L++ AF+ V+ +
Sbjct: 176 VESIREALESVL--RGDISFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSV 233

Query: 333 HHVLCLGNSQLDEQNKQNKNELSRLFDILKKQDPAIFSPEQMKEVEGMMQSL---AMEKE 163
           H V C  N  L EQNK+    LSRL  ++K  +P +FS  Q+KE+E M+ SL   A +KE
Sbjct: 234 HSVFCSMNHVLKEQNKE---ILSRLLSLIKSHEPPLFSSNQIKEMEAMLSSLVTRANDKE 290

Query: 162 KEGNAGSGLNSKESHNVVDNVSHDLISSKEVSL 64
           K+  A  G+N K+S+ V +N  +DL   ++V L
Sbjct: 291 KDMLAMHGVNGKDSNIVTENAVNDLNFKEKVPL 323


>gb|KHG21997.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Gossypium
           arboreum]
          Length = 1256

 Score = 92.4 bits (228), Expect = 8e-16
 Identities = 92/308 (29%), Positives = 131/308 (42%), Gaps = 12/308 (3%)
 Frame = -2

Query: 951 YPMTRIGNYAPDLYNLAWAQAVQSKP---LYVRGGFGSAVRSNNDKEGEKKKGVDPGKEI 781
           YP   I  YA  LYN AWAQAVQ+KP   ++V+       +     E    K   P   +
Sbjct: 64  YPSV-IRGYASGLYNFAWAQAVQNKPLNDIFVK----ELEQQPQQDENNNSKRSSPSSSV 118

Query: 780 CSVVIXXXXXXXXXXXXXXXXXXXXXXXXXDVVMKSESPSGNE----LSLESKEREFPSG 613
            SV                            VV+  ++    E    ++L+ +E E   G
Sbjct: 119 ASV-------------NSKEEKGYSGNSADRVVIDDDTGDEMEEDKIVNLDKEEGELEEG 165

Query: 612 NKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRVNMISEAFKTVTVSNAEKSFQSTFSQL 433
                                          KRVN+I    + +TV  AEKSF+   S+L
Sbjct: 166 E---IDLDSEPVKERVLSSEDGNVGISDELEKRVNLIRGVLEGITVIEAEKSFEVVCSRL 222

Query: 432 NIALESLQLLILESRLPIIDELVEEAFARVRDLHHVLCLGNSQLDEQNKQNKNELSRLFD 253
             ALESL+ L+ E  +P  D L+E AF  V      L   NS L E   QN + LSRL  
Sbjct: 223 QNALESLRGLVFEYGVPTKDTLIELAFGAVNSAFVAL---NSNLKE---QNVSILSRLLS 276

Query: 252 ILKKQDPAIFSPEQMKEVEGMMQSL-----AMEKEKEGNAGSGLNSKESHNVVDNVSHDL 88
           ++K  DP +F  ++MKE+E M+ SL     A++ EKE      +N K+   + +NV HDL
Sbjct: 277 VVKGFDPPLFPLDKMKEIEVMLLSLNSPVRAIDSEKEIKI---VNKKDPDALAENVGHDL 333

Query: 87  ISSKEVSL 64
             + ++ L
Sbjct: 334 TVTNKLPL 341


>ref|XP_012459417.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
           isoform X1 [Gossypium raimondii]
           gi|763810289|gb|KJB77191.1| hypothetical protein
           B456_012G125200 [Gossypium raimondii]
          Length = 1272

 Score = 91.7 bits (226), Expect = 1e-15
 Identities = 92/308 (29%), Positives = 130/308 (42%), Gaps = 12/308 (3%)
 Frame = -2

Query: 951 YPMTRIGNYAPDLYNLAWAQAVQSKP---LYVRGGFGSAVRSNNDKEGEKKKGVDPGKEI 781
           YP   I  YA  LYN AWAQAVQ+KP   ++V+       +     E    K   P   +
Sbjct: 64  YPSV-IRGYASGLYNFAWAQAVQNKPLNDIFVK----ELEQQPQQDENNNSKRSSPSSSV 118

Query: 780 CSVVIXXXXXXXXXXXXXXXXXXXXXXXXXDVVMKSESPSGNE----LSLESKEREFPSG 613
            SV                            VV+  ++    E    ++L+ +E E   G
Sbjct: 119 ASV-------------NSKEEKGYSGNSADRVVIDDDTGDEMEEDKIVNLDKEEGELEEG 165

Query: 612 NKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRVNMISEAFKTVTVSNAEKSFQSTFSQL 433
                                          KRVN+I    + +TV  AEKSF+   S+L
Sbjct: 166 E---IDLDSEPVKERVLSSEDGNVGISDELEKRVNLIRGVLEGITVIEAEKSFEVVCSRL 222

Query: 432 NIALESLQLLILESRLPIIDELVEEAFARVRDLHHVLCLGNSQLDEQNKQNKNELSRLFD 253
             ALESLQ L+ E  +P  D L+E A   V      L   NS L E   QN + LSRL  
Sbjct: 223 QNALESLQGLVFEYGVPTKDTLIELALGAVNSAFVAL---NSNLKE---QNVSILSRLLS 276

Query: 252 ILKKQDPAIFSPEQMKEVEGMMQSL-----AMEKEKEGNAGSGLNSKESHNVVDNVSHDL 88
           ++K  DP +F  ++MKE+E M+ SL     A++ EKE      +N K+   + +NV HDL
Sbjct: 277 VVKGFDPPLFPLDKMKEIEVMLLSLNSPARAIDSEKEIKI---VNKKDPDALAENVGHDL 333

Query: 87  ISSKEVSL 64
             + ++ L
Sbjct: 334 TVTNKLPL 341


>ref|XP_012459418.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
           isoform X2 [Gossypium raimondii]
          Length = 1251

 Score = 90.5 bits (223), Expect = 3e-15
 Identities = 91/300 (30%), Positives = 126/300 (42%), Gaps = 12/300 (4%)
 Frame = -2

Query: 951 YPMTRIGNYAPDLYNLAWAQAVQSKP---LYVRGGFGSAVRSNNDKEGEKKKGVDPGKEI 781
           YP   I  YA  LYN AWAQAVQ+KP   ++V+       +     E    K   P   +
Sbjct: 64  YPSV-IRGYASGLYNFAWAQAVQNKPLNDIFVK----ELEQQPQQDENNNSKRSSPSSSV 118

Query: 780 CSVVIXXXXXXXXXXXXXXXXXXXXXXXXXDVVMKSESPSGNE----LSLESKEREFPSG 613
            SV                            VV+  ++    E    ++L+ +E E   G
Sbjct: 119 ASV-------------NSKEEKGYSGNSADRVVIDDDTGDEMEEDKIVNLDKEEGELEEG 165

Query: 612 NKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRVNMISEAFKTVTVSNAEKSFQSTFSQL 433
                                          KRVN+I    + +TV  AEKSF+   S+L
Sbjct: 166 E---IDLDSEPVKERVLSSEDGNVGISDELEKRVNLIRGVLEGITVIEAEKSFEVVCSRL 222

Query: 432 NIALESLQLLILESRLPIIDELVEEAFARVRDLHHVLCLGNSQLDEQNKQNKNELSRLFD 253
             ALESLQ L+ E  +P  D L+E A   V      L   NS L E   QN + LSRL  
Sbjct: 223 QNALESLQGLVFEYGVPTKDTLIELALGAVNSAFVAL---NSNLKE---QNVSILSRLLS 276

Query: 252 ILKKQDPAIFSPEQMKEVEGMMQSL-----AMEKEKEGNAGSGLNSKESHNVVDNVSHDL 88
           ++K  DP +F  ++MKE+E M+ SL     A++ EKE      +N K+   + +NV HDL
Sbjct: 277 VVKGFDPPLFPLDKMKEIEVMLLSLNSPARAIDSEKEIKI---VNKKDPDALAENVGHDL 333


>ref|XP_010929653.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
           [Elaeis guineensis]
          Length = 1268

 Score = 89.7 bits (221), Expect = 5e-15
 Identities = 60/156 (38%), Positives = 93/156 (59%), Gaps = 9/156 (5%)
 Frame = -2

Query: 516 RVNMISEAFKTVTVSNAEKSFQSTFSQLNIALESLQLLILE--SRLPIIDELVEEAFARV 343
           RV++I E  +TVT    EKSF    S+L  + E L+ +  E  S +P++D LV++AFA +
Sbjct: 192 RVSLILEELETVTEEEVEKSFDGVCSRLRQSFEMLKPMFAETESPVPVLDALVQQAFAGI 251

Query: 342 RDLHHVLCLGNSQLDEQNKQNKNELSRLFDILKKQDPAIFSPEQMKEVEGMMQSLAME-- 169
           + +H VL  G+  L ++ +QNK+ L RL   +K Q   I SPEQ+KE++  +QSL  E  
Sbjct: 252 KTVHSVL--GSENL-KKKEQNKDLLLRLLIHIKNQYSNILSPEQVKEIDTRVQSLVFEDD 308

Query: 168 --KEKEGNAGSGLNSKESHNVV---DNVSHDLISSK 76
             KE + +AGSG N+ +  ++    D   H L+SS+
Sbjct: 309 SYKESKLHAGSGTNTNDKTHLAEKSDISPHSLVSSE 344


>ref|XP_010100046.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Morus
           notabilis] gi|587892642|gb|EXB81217.1| RNA polymerase II
           C-terminal domain phosphatase-like 3 [Morus notabilis]
          Length = 1301

 Score = 89.0 bits (219), Expect = 8e-15
 Identities = 92/323 (28%), Positives = 130/323 (40%), Gaps = 24/323 (7%)
 Frame = -2

Query: 960 WMNYPMTRIGNYAPDLYNLAWAQAVQSKPLYV------------RGGFGSAVRSNNDKEG 817
           + NYP  R   Y   LYNLAWAQAVQ+KPL              R    SA  + N    
Sbjct: 70  YANYPGFR--GYTTGLYNLAWAQAVQNKPLNEIFVMDVDADDSSRVVLSSASPAVNSGRR 127

Query: 816 EKKKGVDPGKEICSVVIXXXXXXXXXXXXXXXXXXXXXXXXXDVVMKSESPSGNELSLES 637
           E K GV   +++  VVI                            M+       E+ LES
Sbjct: 128 EGKNGVKEVEKVEKVVIDDSADE----------------------MEEGELEEGEIDLES 165

Query: 636 KEREFPSGNKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRVNMISEAFKTVTVSNAEKS 457
           +  + P+G +                              RV++I E   +V V NAEKS
Sbjct: 166 EPTQKPAGEEAKDGDLNCEAENVGGLEVDSRRDELEK---RVDLIWETLGSVNVVNAEKS 222

Query: 456 FQSTFSQLNIALESLQLLILESRL--PIIDELVEEAFARVRDLHHVLCLGNSQLDEQNKQ 283
           F+   S+L   LESL+ ++ E     P  D +++ +   ++ ++ V C   S    Q +Q
Sbjct: 223 FEEVCSRLQRTLESLRGVLSEKEFSFPTKDVVIQMSITAIQVVNSVFC---SMSVNQKEQ 279

Query: 282 NKNELSRLFDILKKQDPAIFSPEQMKEVEGMMQSL----------AMEKEKEGNAGSGLN 133
            K  LSRLF  +K     +FSPEQ KE+E M+ SL          A +KEKE      L+
Sbjct: 280 KKETLSRLFCSVKNCGTPLFSPEQTKEIELMISSLNPLNVLPSSGASDKEKETQIIERLH 339

Query: 132 SKESHNVVDNVSHDLISSKEVSL 64
             +S+    N  +  I    V L
Sbjct: 340 EMDSNLTNANAENASIERTSVKL 362


>ref|XP_010656789.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
           isoform X3 [Vitis vinifera]
          Length = 1273

 Score = 88.6 bits (218), Expect = 1e-14
 Identities = 89/325 (27%), Positives = 129/325 (39%), Gaps = 26/325 (8%)
 Frame = -2

Query: 927 YAPDLYNLAWAQAVQSKPL---YVRGGFGSAVRSNNDKEGEKKKGVDPGKEICSVVIXXX 757
           Y P LYNLAWAQAVQ+KPL   +V     S  + ++      +      KE+  V+I   
Sbjct: 86  YTPRLYNLAWAQAVQNKPLNDIFVMDDEES--KRSSSSSNTSRDDSSSAKEVAKVIIDDS 143

Query: 756 XXXXXXXXXXXXXXXXXXXXXXDVVMKSESP--------SGNELSLESKEREFPSGNKLX 601
                                 ++ + SE            NE  ++ KERE        
Sbjct: 144 GDEMDVKMDDVSEKEEGELEEGEIDLDSEPDVKDEGGVLDVNEPEIDLKERELVE----- 198

Query: 600 XXXXXXXXXXXXXXXXXXXXXXXXXXXKRVNMISEAFKTVTVSNAEKSFQSTFSQLNIAL 421
                                       RV  I E  ++VTV  AEKSF    S+L   L
Sbjct: 199 ----------------------------RVKSIQEDLESVTVIEAEKSFSGVCSRLQNTL 230

Query: 420 ESLQ-----LLILESRLPIIDELVEEAFARVRDLHHVLCLGNSQLDEQNKQNKNELSRLF 256
            SLQ      ++ ES +P  D L ++    +R L+HV C  NS    Q + NK+  SRL 
Sbjct: 231 GSLQKVFGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNS---NQKELNKDVFSRLL 287

Query: 255 DILKKQDPAIFSPEQMKEVEGMMQSL----------AMEKEKEGNAGSGLNSKESHNVVD 106
             ++  D  IFS + +KEVE MM  L          A +K  +     G+N     + V+
Sbjct: 288 SCVECGDSPIFSIQHIKEVEVMMSFLDTPAAQSSAEASDKVNDVQVTDGMNRNILDSSVE 347

Query: 105 NVSHDLISSKEVSLEPMLEESGGNN 31
           +      S+K++SL+ +  ES   N
Sbjct: 348 SSGRAFASAKKLSLDSISVESYNQN 372


>ref|XP_010656786.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
           isoform X2 [Vitis vinifera]
          Length = 1276

 Score = 88.6 bits (218), Expect = 1e-14
 Identities = 89/325 (27%), Positives = 129/325 (39%), Gaps = 26/325 (8%)
 Frame = -2

Query: 927 YAPDLYNLAWAQAVQSKPL---YVRGGFGSAVRSNNDKEGEKKKGVDPGKEICSVVIXXX 757
           Y P LYNLAWAQAVQ+KPL   +V     S  + ++      +      KE+  V+I   
Sbjct: 86  YTPRLYNLAWAQAVQNKPLNDIFVMDDEES--KRSSSSSNTSRDDSSSAKEVAKVIIDDS 143

Query: 756 XXXXXXXXXXXXXXXXXXXXXXDVVMKSESP--------SGNELSLESKEREFPSGNKLX 601
                                 ++ + SE            NE  ++ KERE        
Sbjct: 144 GDEMDVKMDDVSEKEEGELEEGEIDLDSEPDVKDEGGVLDVNEPEIDLKERELVE----- 198

Query: 600 XXXXXXXXXXXXXXXXXXXXXXXXXXXKRVNMISEAFKTVTVSNAEKSFQSTFSQLNIAL 421
                                       RV  I E  ++VTV  AEKSF    S+L   L
Sbjct: 199 ----------------------------RVKSIQEDLESVTVIEAEKSFSGVCSRLQNTL 230

Query: 420 ESLQ-----LLILESRLPIIDELVEEAFARVRDLHHVLCLGNSQLDEQNKQNKNELSRLF 256
            SLQ      ++ ES +P  D L ++    +R L+HV C  NS    Q + NK+  SRL 
Sbjct: 231 GSLQKVFGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNS---NQKELNKDVFSRLL 287

Query: 255 DILKKQDPAIFSPEQMKEVEGMMQSL----------AMEKEKEGNAGSGLNSKESHNVVD 106
             ++  D  IFS + +KEVE MM  L          A +K  +     G+N     + V+
Sbjct: 288 SCVECGDSPIFSIQHIKEVEVMMSFLDTPAAQSSAEASDKVNDVQVTDGMNRNILDSSVE 347

Query: 105 NVSHDLISSKEVSLEPMLEESGGNN 31
           +      S+K++SL+ +  ES   N
Sbjct: 348 SSGRAFASAKKLSLDSISVESYNQN 372


>ref|XP_010656784.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
           isoform X1 [Vitis vinifera]
          Length = 1285

 Score = 88.6 bits (218), Expect = 1e-14
 Identities = 89/325 (27%), Positives = 129/325 (39%), Gaps = 26/325 (8%)
 Frame = -2

Query: 927 YAPDLYNLAWAQAVQSKPL---YVRGGFGSAVRSNNDKEGEKKKGVDPGKEICSVVIXXX 757
           Y P LYNLAWAQAVQ+KPL   +V     S  + ++      +      KE+  V+I   
Sbjct: 86  YTPRLYNLAWAQAVQNKPLNDIFVMDDEES--KRSSSSSNTSRDDSSSAKEVAKVIIDDS 143

Query: 756 XXXXXXXXXXXXXXXXXXXXXXDVVMKSESP--------SGNELSLESKEREFPSGNKLX 601
                                 ++ + SE            NE  ++ KERE        
Sbjct: 144 GDEMDVKMDDVSEKEEGELEEGEIDLDSEPDVKDEGGVLDVNEPEIDLKERELVE----- 198

Query: 600 XXXXXXXXXXXXXXXXXXXXXXXXXXXKRVNMISEAFKTVTVSNAEKSFQSTFSQLNIAL 421
                                       RV  I E  ++VTV  AEKSF    S+L   L
Sbjct: 199 ----------------------------RVKSIQEDLESVTVIEAEKSFSGVCSRLQNTL 230

Query: 420 ESLQ-----LLILESRLPIIDELVEEAFARVRDLHHVLCLGNSQLDEQNKQNKNELSRLF 256
            SLQ      ++ ES +P  D L ++    +R L+HV C  NS    Q + NK+  SRL 
Sbjct: 231 GSLQKVFGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNS---NQKELNKDVFSRLL 287

Query: 255 DILKKQDPAIFSPEQMKEVEGMMQSL----------AMEKEKEGNAGSGLNSKESHNVVD 106
             ++  D  IFS + +KEVE MM  L          A +K  +     G+N     + V+
Sbjct: 288 SCVECGDSPIFSIQHIKEVEVMMSFLDTPAAQSSAEASDKVNDVQVTDGMNRNILDSSVE 347

Query: 105 NVSHDLISSKEVSLEPMLEESGGNN 31
           +      S+K++SL+ +  ES   N
Sbjct: 348 SSGRAFASAKKLSLDSISVESYNQN 372


>ref|XP_011656791.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
           [Cucumis sativus] gi|700191214|gb|KGN46418.1|
           hypothetical protein Csa_6G091910 [Cucumis sativus]
          Length = 1251

 Score = 84.7 bits (208), Expect = 2e-13
 Identities = 91/347 (26%), Positives = 140/347 (40%), Gaps = 33/347 (9%)
 Frame = -2

Query: 960 WMNYPMTRIGNYAPDLYNLAWAQAVQSKP---LYVRGG-------------FGSAVR--S 835
           + NYP  R G YA  LYNLAWAQAVQ+KP   ++V                FG+A    S
Sbjct: 62  YKNYPAMRHG-YASGLYNLAWAQAVQNKPLNDIFVMEADLDEKSKHSSSTPFGNAKDDGS 120

Query: 834 NNDKEGEKKKGVDPGKEI-CSVVIXXXXXXXXXXXXXXXXXXXXXXXXXDVVMKSESP-- 664
           N  KE ++    D G E+ C                                M S+S   
Sbjct: 121 NTTKEEDRVVIDDSGDEMNCDNANGEKEEGELEEGEIDMDTEFVEEVADSKAMLSDSRDM 180

Query: 663 --SGNELSLESKEREFPSGNKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRVNMISEAF 490
             +G E  LE+KE +                                   + +  I +  
Sbjct: 181 DINGQEFDLETKELD-----------------------------------ELLKFIQKTL 205

Query: 489 KTVTVSNAEKSFQSTFSQLNIALESLQLLILESRLPIIDELVEEAFARVRDLHHVLCLGN 310
             VT+  A+KSFQ   SQ++ ++E+   L+    +P  D L++  +A +R ++ V C  N
Sbjct: 206 DGVTIDAAQKSFQEVCSQIHSSIETFVELLQGKVVPRKDALIQRLYAALRLINSVFCSMN 265

Query: 309 SQLDEQNKQNKNELSRLFDILKKQDPAIFSPEQMKEVEGMMQSL----------AMEKEK 160
               E++K++   LSRL   +K  DP +FSPEQ+K VE  M S              KE 
Sbjct: 266 LSEKEEHKEH---LSRLLSYVKNCDPPLFSPEQIKSVEVKMPSTDSLDHLPSMRGSAKEV 322

Query: 159 EGNAGSGLNSKESHNVVDNVSHDLISSKEVSLEPMLEESGGNNGYNI 19
           E +  +G+   + ++   + S  L  S +++ + +     G N  NI
Sbjct: 323 EIHIPNGVKDMDFYSAYTSTSSQLTPSNKLASDSIPFGVKGKNNLNI 369


>ref|XP_012088736.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
           [Jatropha curcas] gi|643708360|gb|KDP23276.1|
           hypothetical protein JCGZ_23109 [Jatropha curcas]
          Length = 1283

 Score = 84.7 bits (208), Expect = 2e-13
 Identities = 83/308 (26%), Positives = 131/308 (42%), Gaps = 19/308 (6%)
 Frame = -2

Query: 933 GNYAPDLYNLAWAQAVQSKP---LYV---------RGGFGSAVRSNNDKEGEKKKGVDPG 790
           G Y   LYNLAWAQAVQ+KP   L+V         R    S+V S N      K+  +  
Sbjct: 91  GGYVSGLYNLAWAQAVQNKPLNDLFVEVEPDENSKRSSPSSSVASVNSNSNSNKE--EEK 148

Query: 789 KEICSVVIXXXXXXXXXXXXXXXXXXXXXXXXXDVVMKSESPSGN----ELSLESKEREF 622
           K++  VVI                           ++  E   G     E+ L+S     
Sbjct: 149 KKVEKVVIDDSGDEMDVK-----------------IVDFEKEEGELEEGEIDLDSD---- 187

Query: 621 PSGNKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRVNMISEAFKTVTVSNAEKSFQSTF 442
           P+   +                            K+V  I EA + +TV+ + KSF++  
Sbjct: 188 PAEKAIDEGKERFLNNDEMDIDVSETKSKDKDLEKKVKFIREALEALTVTESNKSFETAC 247

Query: 441 SQLNIALESLQLLILESRLPIIDELVEEAFARVRDLHHVLCLGNSQLDEQNKQNKNELSR 262
           S L   L+SL+ +I ++ +P  D L++ +   V+ ++ V    N +L EQNK +    SR
Sbjct: 248 SMLGNTLKSLREVIGKNNIPTKDNLLQLSSNAVQSVNSVFTSMNHKLREQNKDS---FSR 304

Query: 261 LFDILKKQDPAIFSPEQMKEVEGMMQSLAM---EKEKEGNAGSGLNSKESHNVVDNVSHD 91
              ++    P++ SPE +KE+E M  SL+    EKEKE    S   +K+      +  H 
Sbjct: 305 FLSVVNSHVPSLLSPELIKEIEVMTSSLSSISGEKEKESLIFSDEGNKKDDMSAKSSGHS 364

Query: 90  LISSKEVS 67
           L ++K++S
Sbjct: 365 LTTAKKLS 372