BLASTX nr result

ID: Cinnamomum23_contig00021353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00021353
         (482 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010248921.1| PREDICTED: sister chromatid cohesion 1 prote...    65   1e-08
ref|XP_010248920.1| PREDICTED: sister chromatid cohesion 1 prote...    65   1e-08

>ref|XP_010248921.1| PREDICTED: sister chromatid cohesion 1 protein 2 isoform X2
           [Nelumbo nucifera]
          Length = 494

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
 Frame = -3

Query: 447 TLVEDF--PHAMDFCLETSDSHVISGFRDSIEKLRXXXXXXXXXXXLEMYCGEVESFDLN 274
           T +ED   P+ +DF +++   H  S   +S+EKLR            E+YCG  E  D  
Sbjct: 171 TPIEDVLSPYMLDFNMDSLPYHYQSNLEESMEKLRCNLFPQEEQLDHELYCGAEEPLDFV 230

Query: 273 QYCGEMGPCVGQIISEEMTFSDSEKSLVLAEGFPLDTTPAKSCDNSSVPKISVSTTTDVM 94
               +       +   E+   D     +  EG P++TTP K+ D ++    S + T  VM
Sbjct: 231 AQFDKTDDQEENLKFLEIPPLDIGGYDIFTEGHPIETTPDKTSDKTNFSHPSGAVTPGVM 290

Query: 93  IIPTPTXXXXXXXXXXXKHFLDEAVVLSNEV 1
           +IPTP+           +   DE +VL NEV
Sbjct: 291 VIPTPSKKEQARRPRKRRSLFDEMIVLPNEV 321


>ref|XP_010248920.1| PREDICTED: sister chromatid cohesion 1 protein 2 isoform X1
           [Nelumbo nucifera]
          Length = 559

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
 Frame = -3

Query: 447 TLVEDF--PHAMDFCLETSDSHVISGFRDSIEKLRXXXXXXXXXXXLEMYCGEVESFDLN 274
           T +ED   P+ +DF +++   H  S   +S+EKLR            E+YCG  E  D  
Sbjct: 171 TPIEDVLSPYMLDFNMDSLPYHYQSNLEESMEKLRCNLFPQEEQLDHELYCGAEEPLDFV 230

Query: 273 QYCGEMGPCVGQIISEEMTFSDSEKSLVLAEGFPLDTTPAKSCDNSSVPKISVSTTTDVM 94
               +       +   E+   D     +  EG P++TTP K+ D ++    S + T  VM
Sbjct: 231 AQFDKTDDQEENLKFLEIPPLDIGGYDIFTEGHPIETTPDKTSDKTNFSHPSGAVTPGVM 290

Query: 93  IIPTPTXXXXXXXXXXXKHFLDEAVVLSNEV 1
           +IPTP+           +   DE +VL NEV
Sbjct: 291 VIPTPSKKEQARRPRKRRSLFDEMIVLPNEV 321


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