BLASTX nr result
ID: Cinnamomum23_contig00020741
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00020741
(226 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AJT37038.1| Ycf1, partial (chloroplast) [Laurus nobilis] 127 3e-27
gb|AJT36808.1| Ycf1, partial (chloroplast) [Lindera glauca] 127 3e-27
gb|AJT38290.1| Ycf1, partial (chloroplast) [Calycanthus floridus] 108 1e-21
gb|AJT38300.1| Ycf1, partial (chloroplast) [Chimonanthus praecox... 107 4e-21
gb|AJT38296.1| Ycf1, partial (chloroplast) [Chimonanthus nitens]... 107 4e-21
gb|AJT38292.1| Ycf1, partial (chloroplast) [Chimonanthus campanu... 107 4e-21
gb|AJT38291.1| Ycf1, partial (chloroplast) [Calycanthus occident... 107 4e-21
gb|AJT38287.1| Ycf1, partial (chloroplast) [Calycanthus floridus... 107 4e-21
gb|AJT38286.1| Ycf1, partial (chloroplast) [Calycanthus chinensis] 107 4e-21
gb|AJT36774.1| Ycf1, partial (chloroplast) [Calycanthus chinensis] 107 4e-21
ref|NP_862813.1| Ycf1 protein [Calycanthus floridus var. glaucus... 107 4e-21
gb|AJT38307.1| Ycf1, partial (chloroplast) [Chimonanthus salicif... 105 1e-20
gb|AJT38293.1| Ycf1, partial (chloroplast) [Chimonanthus grammat... 105 1e-20
ref|YP_008081515.1| hypothetical chloroplast RF1 (chloroplast) [... 105 2e-20
ref|YP_740623.1| hypothetical chloroplast RF1 [Platanus occident... 104 2e-20
gb|ADD30908.1| putative RF1 protein (chloroplast) [Meliosma aff.... 101 2e-19
ref|YP_009048348.1| hypothetical chloroplast RF1 (chloroplast) [... 101 2e-19
gb|AJT38312.1| Ycf1, partial (chloroplast) [Idiospermum australi... 100 3e-19
ref|YP_784445.1| hypothetical protein RF1 [Drimys granadensis] g... 100 3e-19
gb|AJT37012.1| Ycf1, partial (chloroplast) [Magnolia x soulangeana] 100 5e-19
>gb|AJT37038.1| Ycf1, partial (chloroplast) [Laurus nobilis]
Length = 302
Score = 127 bits (319), Expect = 3e-27
Identities = 61/61 (100%), Positives = 61/61 (100%)
Frame = -1
Query: 226 MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL 47
MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL
Sbjct: 16 MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL 75
Query: 46 Y 44
Y
Sbjct: 76 Y 76
>gb|AJT36808.1| Ycf1, partial (chloroplast) [Lindera glauca]
Length = 302
Score = 127 bits (319), Expect = 3e-27
Identities = 61/61 (100%), Positives = 61/61 (100%)
Frame = -1
Query: 226 MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL 47
MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL
Sbjct: 4 MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL 63
Query: 46 Y 44
Y
Sbjct: 64 Y 64
>gb|AJT38290.1| Ycf1, partial (chloroplast) [Calycanthus floridus]
Length = 289
Score = 108 bits (270), Expect = 1e-21
Identities = 50/61 (81%), Positives = 57/61 (93%)
Frame = -1
Query: 226 MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL 47
+++ +SLCTTEKLSPEDLYNHWVYTNEQKR +L+NEFINRIE LNKGSL+M VLEKRTRL
Sbjct: 1 IEKHLSLCTTEKLSPEDLYNHWVYTNEQKRCNLNNEFINRIEALNKGSLSMHVLEKRTRL 60
Query: 46 Y 44
Y
Sbjct: 61 Y 61
>gb|AJT38300.1| Ycf1, partial (chloroplast) [Chimonanthus praecox]
gi|766949081|gb|AJT38301.1| Ycf1, partial (chloroplast)
[Chimonanthus praecox] gi|766949083|gb|AJT38302.1| Ycf1,
partial (chloroplast) [Chimonanthus praecox]
gi|766949085|gb|AJT38303.1| Ycf1, partial (chloroplast)
[Chimonanthus praecox]
Length = 289
Score = 107 bits (266), Expect = 4e-21
Identities = 49/61 (80%), Positives = 57/61 (93%)
Frame = -1
Query: 226 MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL 47
+++ +SLCTTEKLSPEDLYNHWVYTNE+KR +L+NEFINRIE LNKGSL+M VLEKRTRL
Sbjct: 1 IEKHLSLCTTEKLSPEDLYNHWVYTNEKKRCNLNNEFINRIEALNKGSLSMHVLEKRTRL 60
Query: 46 Y 44
Y
Sbjct: 61 Y 61
>gb|AJT38296.1| Ycf1, partial (chloroplast) [Chimonanthus nitens]
gi|766949073|gb|AJT38297.1| Ycf1, partial (chloroplast)
[Chimonanthus nitens] gi|766949075|gb|AJT38298.1| Ycf1,
partial (chloroplast) [Chimonanthus nitens]
gi|766949077|gb|AJT38299.1| Ycf1, partial (chloroplast)
[Chimonanthus nitens]
Length = 289
Score = 107 bits (266), Expect = 4e-21
Identities = 49/61 (80%), Positives = 57/61 (93%)
Frame = -1
Query: 226 MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL 47
+++ +SLCTTEKLSPEDLYNHWVYTNE+KR +L+NEFINRIE LNKGSL+M VLEKRTRL
Sbjct: 1 IEKHLSLCTTEKLSPEDLYNHWVYTNEKKRCNLNNEFINRIEALNKGSLSMHVLEKRTRL 60
Query: 46 Y 44
Y
Sbjct: 61 Y 61
>gb|AJT38292.1| Ycf1, partial (chloroplast) [Chimonanthus campanulatus]
Length = 289
Score = 107 bits (266), Expect = 4e-21
Identities = 49/61 (80%), Positives = 57/61 (93%)
Frame = -1
Query: 226 MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL 47
+++ +SLCTTEKLSPEDLYNHWVYTNE+KR +L+NEFINRIE LNKGSL+M VLEKRTRL
Sbjct: 1 IEKHLSLCTTEKLSPEDLYNHWVYTNEKKRCNLNNEFINRIEALNKGSLSMHVLEKRTRL 60
Query: 46 Y 44
Y
Sbjct: 61 Y 61
>gb|AJT38291.1| Ycf1, partial (chloroplast) [Calycanthus occidentalis]
Length = 289
Score = 107 bits (266), Expect = 4e-21
Identities = 49/61 (80%), Positives = 57/61 (93%)
Frame = -1
Query: 226 MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL 47
+++ +SLCTTEKLSPEDLYNHWVYTNE+KR +L+NEFINRIE LNKGSL+M VLEKRTRL
Sbjct: 1 IEKHLSLCTTEKLSPEDLYNHWVYTNEKKRCNLNNEFINRIEALNKGSLSMHVLEKRTRL 60
Query: 46 Y 44
Y
Sbjct: 61 Y 61
>gb|AJT38287.1| Ycf1, partial (chloroplast) [Calycanthus floridus]
gi|766949055|gb|AJT38288.1| Ycf1, partial (chloroplast)
[Calycanthus floridus] gi|766949057|gb|AJT38289.1| Ycf1,
partial (chloroplast) [Calycanthus floridus]
Length = 289
Score = 107 bits (266), Expect = 4e-21
Identities = 49/61 (80%), Positives = 57/61 (93%)
Frame = -1
Query: 226 MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL 47
+++ +SLCTTEKLSPEDLYNHWVYTNE+KR +L+NEFINRIE LNKGSL+M VLEKRTRL
Sbjct: 1 IEKHLSLCTTEKLSPEDLYNHWVYTNEKKRCNLNNEFINRIEALNKGSLSMHVLEKRTRL 60
Query: 46 Y 44
Y
Sbjct: 61 Y 61
>gb|AJT38286.1| Ycf1, partial (chloroplast) [Calycanthus chinensis]
Length = 289
Score = 107 bits (266), Expect = 4e-21
Identities = 49/61 (80%), Positives = 57/61 (93%)
Frame = -1
Query: 226 MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL 47
+++ +SLCTTEKLSPEDLYNHWVYTNE+KR +L+NEFINRIE LNKGSL+M VLEKRTRL
Sbjct: 1 IEKHLSLCTTEKLSPEDLYNHWVYTNEKKRCNLNNEFINRIEALNKGSLSMHVLEKRTRL 60
Query: 46 Y 44
Y
Sbjct: 61 Y 61
>gb|AJT36774.1| Ycf1, partial (chloroplast) [Calycanthus chinensis]
Length = 298
Score = 107 bits (266), Expect = 4e-21
Identities = 49/61 (80%), Positives = 57/61 (93%)
Frame = -1
Query: 226 MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL 47
+++ +SLCTTEKLSPEDLYNHWVYTNE+KR +L+NEFINRIE LNKGSL+M VLEKRTRL
Sbjct: 14 IEKHLSLCTTEKLSPEDLYNHWVYTNEKKRCNLNNEFINRIEALNKGSLSMHVLEKRTRL 73
Query: 46 Y 44
Y
Sbjct: 74 Y 74
>ref|NP_862813.1| Ycf1 protein [Calycanthus floridus var. glaucus]
gi|75146316|sp|Q7YJS6.1|TI214_CALFG RecName:
Full=Protein TIC 214; AltName: Full=Translocon at the
inner envelope membrane of chloroplasts 214;
Short=AtTIC214 (chloroplast) [Calycanthus floridus var.
glaucus] gi|32399439|emb|CAD28780.1| Ycf1 protein
[Calycanthus floridus var. glaucus]
Length = 1828
Score = 107 bits (266), Expect = 4e-21
Identities = 49/61 (80%), Positives = 57/61 (93%)
Frame = -1
Query: 226 MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL 47
+++ +SLCTTEKLSPEDLYNHWVYTNE+KR +L+NEFINRIE LNKGSL+M VLEKRTRL
Sbjct: 391 IEKHLSLCTTEKLSPEDLYNHWVYTNEKKRCNLNNEFINRIEALNKGSLSMHVLEKRTRL 450
Query: 46 Y 44
Y
Sbjct: 451 Y 451
>gb|AJT38307.1| Ycf1, partial (chloroplast) [Chimonanthus salicifolius]
gi|766949097|gb|AJT38309.1| Ycf1, partial (chloroplast)
[Chimonanthus salicifolius]
Length = 289
Score = 105 bits (262), Expect = 1e-20
Identities = 48/61 (78%), Positives = 57/61 (93%)
Frame = -1
Query: 226 MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL 47
+++ +SLCTTEKLSP+DLYNHWVYTNE+KR +L+NEFINRIE LNKGSL+M VLEKRTRL
Sbjct: 1 IEKHLSLCTTEKLSPKDLYNHWVYTNEKKRCNLNNEFINRIEALNKGSLSMHVLEKRTRL 60
Query: 46 Y 44
Y
Sbjct: 61 Y 61
>gb|AJT38293.1| Ycf1, partial (chloroplast) [Chimonanthus grammatus]
gi|766949067|gb|AJT38294.1| Ycf1, partial (chloroplast)
[Chimonanthus grammatus] gi|766949069|gb|AJT38295.1|
Ycf1, partial (chloroplast) [Chimonanthus grammatus]
gi|766949087|gb|AJT38304.1| Ycf1, partial (chloroplast)
[Chimonanthus salicifolius] gi|766949089|gb|AJT38305.1|
Ycf1, partial (chloroplast) [Chimonanthus salicifolius]
gi|766949091|gb|AJT38306.1| Ycf1, partial (chloroplast)
[Chimonanthus salicifolius] gi|766949095|gb|AJT38308.1|
Ycf1, partial (chloroplast) [Chimonanthus salicifolius]
gi|766949099|gb|AJT38310.1| Ycf1, partial (chloroplast)
[Chimonanthus zhejiangensis] gi|766949101|gb|AJT38311.1|
Ycf1, partial (chloroplast) [Chimonanthus zhejiangensis]
Length = 289
Score = 105 bits (262), Expect = 1e-20
Identities = 48/61 (78%), Positives = 57/61 (93%)
Frame = -1
Query: 226 MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL 47
+++ +SLCTTEKLSP+DLYNHWVYTNE+KR +L+NEFINRIE LNKGSL+M VLEKRTRL
Sbjct: 1 IEKHLSLCTTEKLSPKDLYNHWVYTNEKKRCNLNNEFINRIEALNKGSLSMHVLEKRTRL 60
Query: 46 Y 44
Y
Sbjct: 61 Y 61
>ref|YP_008081515.1| hypothetical chloroplast RF1 (chloroplast) [Trochodendron
aralioides] gi|290489080|gb|ADD30924.1| putative RF1
protein (chloroplast) [Trochodendron aralioides]
gi|479279354|gb|AGJ72207.1| hypothetical chloroplast RF1
(chloroplast) [Trochodendron aralioides]
Length = 1896
Score = 105 bits (261), Expect = 2e-20
Identities = 49/60 (81%), Positives = 56/60 (93%)
Frame = -1
Query: 226 MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL 47
+QRKMSLCTTEKLS E+LYNHWVYTNEQK+ +L+NEFINRIE L+KGSL +DVLEKRTRL
Sbjct: 426 IQRKMSLCTTEKLSSEELYNHWVYTNEQKKNNLNNEFINRIEALDKGSLALDVLEKRTRL 485
>ref|YP_740623.1| hypothetical chloroplast RF1 [Platanus occidentalis]
gi|118574761|sp|Q09FY8.1|TI214_PLAOC RecName:
Full=Protein TIC 214; AltName: Full=Translocon at the
inner envelope membrane of chloroplasts 214;
Short=AtTIC214 (chloroplast) [Platanus occidentalis]
gi|114054443|gb|ABI49837.1| hypothetical chloroplast RF1
[Platanus occidentalis]
Length = 1915
Score = 104 bits (260), Expect = 2e-20
Identities = 50/60 (83%), Positives = 56/60 (93%)
Frame = -1
Query: 226 MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL 47
+QRKMSL TTEKLSPE+LYNHWVYTNEQKR ++S EFINRIE L+KGSLT+DVLEKRTRL
Sbjct: 438 IQRKMSLYTTEKLSPEELYNHWVYTNEQKRNNVSKEFINRIEALDKGSLTLDVLEKRTRL 497
>gb|ADD30908.1| putative RF1 protein (chloroplast) [Meliosma aff. cuneifolia Moore
333]
Length = 1894
Score = 101 bits (252), Expect = 2e-19
Identities = 47/60 (78%), Positives = 53/60 (88%)
Frame = -1
Query: 226 MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL 47
+QRKMSLCTTEKLS E+LYNHW+YTNEQKR SL NEF+NR++ LNKG L DVLEKRTRL
Sbjct: 433 IQRKMSLCTTEKLSSEELYNHWIYTNEQKRNSLKNEFLNRMKALNKGFLARDVLEKRTRL 492
>ref|YP_009048348.1| hypothetical chloroplast RF1 (chloroplast) [Magnolia yunnanensis]
gi|573015504|gb|AHF72082.1| hypothetical chloroplast RF1
(chloroplast) [Magnolia yunnanensis]
Length = 1844
Score = 101 bits (251), Expect = 2e-19
Identities = 50/61 (81%), Positives = 57/61 (93%), Gaps = 1/61 (1%)
Frame = -1
Query: 226 MQRKMSLCTTEKL-SPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTR 50
+QRKMSL TTEKL SPEDLYNHWV TNEQKR++LSNEF+NRIE L+KG+LT+DVLEKRTR
Sbjct: 391 IQRKMSLRTTEKLLSPEDLYNHWVSTNEQKRHNLSNEFVNRIEALDKGTLTLDVLEKRTR 450
Query: 49 L 47
L
Sbjct: 451 L 451
>gb|AJT38312.1| Ycf1, partial (chloroplast) [Idiospermum australiense]
Length = 289
Score = 100 bits (250), Expect = 3e-19
Identities = 47/60 (78%), Positives = 55/60 (91%)
Frame = -1
Query: 226 MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTRL 47
+++ +SLCTTEKLSPEDLYNHWV TNE+KR +L+NEFINRIE LNKGSL+M VLEKRTRL
Sbjct: 1 IEKHLSLCTTEKLSPEDLYNHWVSTNEKKRCNLNNEFINRIEALNKGSLSMHVLEKRTRL 60
>ref|YP_784445.1| hypothetical protein RF1 [Drimys granadensis]
gi|118574748|sp|Q06GT8.1|TI214_DRIGR RecName:
Full=Protein TIC 214; AltName: Full=Translocon at the
inner envelope membrane of chloroplasts 214;
Short=AtTIC214 (chloroplast) [Drimys granadensis]
gi|112032721|gb|ABH88356.1| hypothetical protein RF1
[Drimys granadensis]
Length = 1857
Score = 100 bits (250), Expect = 3e-19
Identities = 46/59 (77%), Positives = 54/59 (91%)
Frame = -1
Query: 226 MQRKMSLCTTEKLSPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTR 50
+QR +SLCTTEKLSP+DLYNHWVYTNEQKR++LSNEF NR+E L+KGSL +DVLEKR R
Sbjct: 389 IQRNISLCTTEKLSPKDLYNHWVYTNEQKRHNLSNEFRNRMEALDKGSLALDVLEKRIR 447
>gb|AJT37012.1| Ycf1, partial (chloroplast) [Magnolia x soulangeana]
Length = 306
Score = 100 bits (248), Expect = 5e-19
Identities = 49/61 (80%), Positives = 57/61 (93%), Gaps = 1/61 (1%)
Frame = -1
Query: 226 MQRKMSLCTTEKL-SPEDLYNHWVYTNEQKRYSLSNEFINRIEVLNKGSLTMDVLEKRTR 50
+QRKMSL TTEKL SPEDLYNHWV TNEQKR++LSNEF+NRIE L+KG++T+DVLEKRTR
Sbjct: 10 IQRKMSLRTTEKLLSPEDLYNHWVSTNEQKRHNLSNEFVNRIEALDKGTVTLDVLEKRTR 69
Query: 49 L 47
L
Sbjct: 70 L 70