BLASTX nr result

ID: Cinnamomum23_contig00020655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00020655
         (571 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006644067.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-06
ref|XP_008778136.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
ref|XP_010922078.1| PREDICTED: pentatricopeptide repeat-containi...    57   7e-06
emb|CDP09580.1| unnamed protein product [Coffea canephora]             56   1e-05

>ref|XP_006644067.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Oryza brachyantha]
          Length = 594

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
 Frame = -3

Query: 509 LFPSIFCF-----FHSVMQFWLVVEHHKLPDLDEQEYASHLDLIDKVHGLVKTKKYITEI 345
           LF  I C      +   +Q    VE  KL DL E++YASH+DL+ KVHG+ K +KYI +I
Sbjct: 160 LFYVILCLRKRKLYRKALQLLEYVEESKLLDLGERDYASHVDLVAKVHGIYKAEKYIEDI 219

Query: 344 PKLFHGKGFWRT 309
           P    G+  +RT
Sbjct: 220 PASHRGEIVYRT 231


>ref|XP_008778136.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like, partial [Phoenix dactylifera]
          Length = 610

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 28/60 (46%), Positives = 41/60 (68%)
 Frame = -3

Query: 488 FFHSVMQFWLVVEHHKLPDLDEQEYASHLDLIDKVHGLVKTKKYITEIPKLFHGKGFWRT 309
           F+   +QF   +E +K  +  E++YASHLDL+ KVHGL K +KYI +IP+ F G+  +RT
Sbjct: 189 FYAKALQFIEWLEANKRIEPVERDYASHLDLVAKVHGLQKAEKYIEKIPESFRGEVIYRT 248


>ref|XP_010922078.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Elaeis guineensis]
          Length = 650

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 28/60 (46%), Positives = 39/60 (65%)
 Frame = -3

Query: 488 FFHSVMQFWLVVEHHKLPDLDEQEYASHLDLIDKVHGLVKTKKYITEIPKLFHGKGFWRT 309
           F+   +QF   +E  K  +  E++YASHLDL+ KVHGL K +KYI  IP+ F G+  +RT
Sbjct: 229 FYQKALQFVEWLEASKHLNFVERDYASHLDLVAKVHGLQKAEKYINMIPESFRGEIIYRT 288


>emb|CDP09580.1| unnamed protein product [Coffea canephora]
          Length = 249

 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
 Frame = -3

Query: 485 FHSVMQF--WLVVEHHKLPDLDEQEYASHLDLIDKVHGLVKTKKYITEIPKLFHGKGFWR 312
           F S ++F  WL +E H   +  E++YAS +DLI KVHGL KT+ YI  IPK F G+  +R
Sbjct: 69  FESALEFSEWLELEGH---EFGERDYASCVDLIAKVHGLQKTESYIANIPKSFQGEVVYR 125

Query: 311 T 309
           T
Sbjct: 126 T 126


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