BLASTX nr result

ID: Cinnamomum23_contig00020201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00020201
         (950 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010262231.1| PREDICTED: leucine-rich repeat extensin-like...    65   7e-08
ref|XP_002521331.1| actin binding protein, putative [Ricinus com...    53   1e-07
ref|XP_009372413.1| PREDICTED: branchpoint-bridging protein [Pyr...    54   1e-07
ref|XP_008228201.1| PREDICTED: leucine-rich repeat extensin-like...    59   2e-07

>ref|XP_010262231.1| PREDICTED: leucine-rich repeat extensin-like protein 3 [Nelumbo
           nucifera]
          Length = 226

 Score = 65.1 bits (157), Expect = 7e-08
 Identities = 27/45 (60%), Positives = 39/45 (86%)
 Frame = -1

Query: 515 SKQPTRKVNLGRKIGLVFVGMAGLLQVAVVGFLGFRRWQISNIKE 381
           +K P + +N+G+KIGL+F G+AG+LQVAVVGF+ F+RWQ+S IK+
Sbjct: 178 TKPPDQTINIGKKIGLLFAGVAGVLQVAVVGFIVFKRWQVSKIKD 222


>ref|XP_002521331.1| actin binding protein, putative [Ricinus communis]
           gi|223539409|gb|EEF40999.1| actin binding protein,
           putative [Ricinus communis]
          Length = 210

 Score = 53.1 bits (126), Expect(2) = 1e-07
 Identities = 24/53 (45%), Positives = 35/53 (66%)
 Frame = -1

Query: 542 SKTRSTHPGSKQPTRKVNLGRKIGLVFVGMAGLLQVAVVGFLGFRRWQISNIK 384
           S TR   P  K     +N G+KIGL+FVG+A +LQ+ V+GFL F+R Q+  ++
Sbjct: 150 SWTRHNRPPPKNSNHSMNTGKKIGLLFVGIAAILQIGVIGFLVFKRKQLLRVQ 202



 Score = 30.8 bits (68), Expect(2) = 1e-07
 Identities = 21/52 (40%), Positives = 23/52 (44%)
 Frame = -2

Query: 799 PTPPPTLSSKCPP*P*RF*SQPSLWSNLPSPLIPPRHPGIGTRQATARTDPP 644
           P+PPP  SS  PP P      P   S  PSP  PP      T   T+ T PP
Sbjct: 90  PSPPPPASSSSPPPP----PPPPPSSPPPSPPPPP------TPSYTSNTSPP 131


>ref|XP_009372413.1| PREDICTED: branchpoint-bridging protein [Pyrus x bretschneideri]
          Length = 181

 Score = 54.3 bits (129), Expect(2) = 1e-07
 Identities = 26/56 (46%), Positives = 35/56 (62%)
 Frame = -1

Query: 548 KVSKTRSTHPGSKQPTRKVNLGRKIGLVFVGMAGLLQVAVVGFLGFRRWQISNIKE 381
           K    R  HP   Q   K N G+KIGL+FVG A +LQ+ V+GFL F+R Q+  +K+
Sbjct: 120 KPKSGRREHPLPPQRGHKYNAGKKIGLLFVGTASILQIGVIGFLVFKRRQLLKVKD 175



 Score = 29.6 bits (65), Expect(2) = 1e-07
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -2

Query: 796 TPPPTLSSKCPP*P*RF*SQPSLWSNLPSPLIPPRHPG-IGTRQATARTDPP 644
           +PPP  S   PP P      P++ S   SPL P R P  I +   + R  PP
Sbjct: 63  SPPPPESPTPPPNPPPLPESPNMPSPSESPLPPDRPPNQISSNNDSKRPPPP 114


>ref|XP_008228201.1| PREDICTED: leucine-rich repeat extensin-like protein 3 [Prunus
           mume]
          Length = 189

 Score = 58.9 bits (141), Expect(2) = 2e-07
 Identities = 26/54 (48%), Positives = 36/54 (66%)
 Frame = -1

Query: 542 SKTRSTHPGSKQPTRKVNLGRKIGLVFVGMAGLLQVAVVGFLGFRRWQISNIKE 381
           +  R  HP    P  K N G+KIGL+FVGMA +LQ+ V+GFL F+R Q+  +K+
Sbjct: 130 TNNRRPHPPPPHPGHKYNAGKKIGLLFVGMAAILQIGVIGFLVFKRRQLLRVKD 183



 Score = 24.6 bits (52), Expect(2) = 2e-07
 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 18/73 (24%)
 Frame = -2

Query: 805 IFPTPPPTLSSKCP----P*P*RF*SQPSL-------WSNLPSPL-----IPPRHPG--I 680
           ++P PPP LS   P    P P    + PS         SN PSPL      PP  P   +
Sbjct: 51  LWPPPPPPLSPSPPQSPTPPPPESPTPPSPNSPSRPDSSNSPSPLESPGPPPPARPANQL 110

Query: 679 GTRQATARTDPPS 641
            ++    R  PPS
Sbjct: 111 NSKNDQKRLPPPS 123


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