BLASTX nr result

ID: Cinnamomum23_contig00019937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00019937
         (805 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    63   3e-07
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210...    60   1e-06
ref|XP_008779830.1| PREDICTED: putative ribonuclease H protein A...    60   2e-06
ref|XP_008782096.1| PREDICTED: uncharacterized protein LOC103701...    59   5e-06
ref|XP_011077924.1| PREDICTED: uncharacterized protein LOC105161...    58   6e-06
ref|XP_009124788.1| PREDICTED: putative ribonuclease H protein A...    58   6e-06
ref|XP_009119466.1| PREDICTED: uncharacterized protein LOC103844...    58   6e-06
ref|XP_008806372.1| PREDICTED: putative ribonuclease H protein A...    58   6e-06
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    58   6e-06
ref|XP_009107566.1| PREDICTED: uncharacterized protein LOC103833...    58   8e-06
ref|XP_008340459.1| PREDICTED: putative ribonuclease H protein A...    58   8e-06

>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 32/70 (45%), Positives = 46/70 (65%)
 Frame = -1

Query: 280  NLSKILGIRLMKGDEKYLGNPIMPRRGKISCFETLIEKIKSRIISWQWSSLSQAGRSTLI 101
            ++S+ILG++ + G  KYLG P M  R +IS F+ + E++  +I SW    LSQAGR TLI
Sbjct: 1158 SISQILGVQQVMGTGKYLGVPSMVGRSRISTFKFVKERVWKKINSWSSKCLSQAGRETLI 1217

Query: 100  KSVASATPVH 71
            KSV  + P +
Sbjct: 1218 KSVLQSIPFY 1227


>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
           putative protein [Arabidopsis thaliana]
          Length = 947

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 33/77 (42%), Positives = 45/77 (58%)
 Frame = -1

Query: 301 LKRTLNHNLSKILGIRLMKGDEKYLGNPIMPRRGKISCFETLIEKIKSRIISWQWSSLSQ 122
           + R L   +SK  GI+  +   KYLG PI+ RR     F  ++E++ SR+  W+  SLS 
Sbjct: 404 VSRDLEKLISKESGIKSTRELGKYLGMPILQRRINKDTFGEVLERVSSRLAGWKGRSLSF 463

Query: 121 AGRSTLIKSVASATPVH 71
           AGR TL KSV S  P+H
Sbjct: 464 AGRLTLTKSVLSLIPIH 480


>ref|XP_008779830.1| PREDICTED: putative ribonuclease H protein At1g65750, partial
           [Phoenix dactylifera]
          Length = 478

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 29/76 (38%), Positives = 50/76 (65%)
 Frame = -1

Query: 298 KRTLNHNLSKILGIRLMKGDEKYLGNPIMPRRGKISCFETLIEKIKSRIISWQWSSLSQA 119
           +R +   +  ILG+R ++G   YLG PI  RR +++   +L+++++SR+  W+ SSLS  
Sbjct: 121 ERRVRREIRGILGMRELEGALDYLGVPITGRRLRVTECSSLVQRVQSRLEGWRASSLSMM 180

Query: 118 GRSTLIKSVASATPVH 71
           GR TL++SV  + PV+
Sbjct: 181 GRLTLVRSVLCSMPVY 196


>ref|XP_008782096.1| PREDICTED: uncharacterized protein LOC103701709 [Phoenix
           dactylifera]
          Length = 747

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 28/76 (36%), Positives = 49/76 (64%)
 Frame = -1

Query: 298 KRTLNHNLSKILGIRLMKGDEKYLGNPIMPRRGKISCFETLIEKIKSRIISWQWSSLSQA 119
           +R +   +  +LG++  +G   YLG PI  RR +++   TL+++++SR+  W+ SSLS  
Sbjct: 183 ERRVRREIRALLGMQEQEGALDYLGVPITGRRLRVAECSTLVQRVQSRLKGWRASSLSMM 242

Query: 118 GRSTLIKSVASATPVH 71
           GR TL++SV  + PV+
Sbjct: 243 GRLTLVRSVLCSMPVY 258


>ref|XP_011077924.1| PREDICTED: uncharacterized protein LOC105161808 [Sesamum indicum]
          Length = 476

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
 Frame = -1

Query: 394 WFI-TYK*PITMV*NLRATSMVTTKWIETKFLLKRTLNHN---LSKILGIRLMKGDEKYL 227
           W + T++    +V NL  +SM  T W         T N     L++ILG+R++   EKYL
Sbjct: 83  WILKTFEKASGLVVNLEKSSMAFT-W--------NTFNETQAELARILGVRVVAKHEKYL 133

Query: 226 GNPIMPRRGKISCFETLIEKIKSRIISWQWSSLSQAGRSTLIKSVASATP 77
           G P +  R K   F+++ +K+ +R+  W++ +LSQA +  L+KSV    P
Sbjct: 134 GLPTLVGRSKREVFQSIKDKVWARLQRWRYKNLSQASKLVLLKSVVQTLP 183


>ref|XP_009124788.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 339

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 32/77 (41%), Positives = 44/77 (57%)
 Frame = -1

Query: 301 LKRTLNHNLSKILGIRLMKGDEKYLGNPIMPRRGKISCFETLIEKIKSRIISWQWSSLSQ 122
           + R     +S+  GI   K   KYLG PI+ +R     F  ++EK+ SR+  W+  +LS 
Sbjct: 80  VSRGREERISRESGIASTKELGKYLGMPILQKRINKDTFGEVLEKVASRLAGWKKQTLSL 139

Query: 121 AGRSTLIKSVASATPVH 71
           AGR TL KSV S+ PVH
Sbjct: 140 AGRVTLTKSVLSSIPVH 156


>ref|XP_009119466.1| PREDICTED: uncharacterized protein LOC103844431 [Brassica rapa]
          Length = 1834

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 32/75 (42%), Positives = 44/75 (58%)
 Frame = -1

Query: 295  RTLNHNLSKILGIRLMKGDEKYLGNPIMPRRGKISCFETLIEKIKSRIISWQWSSLSQAG 116
            R L   +S   GI+  K   KYLG P++ +R     F T+IE++ S++  W+   LS AG
Sbjct: 1191 RDLTTLISDESGIKATKDLGKYLGMPVLQKRINKETFGTIIERMSSKLAGWKRRFLSLAG 1250

Query: 115  RSTLIKSVASATPVH 71
            R TL KSV S+ PVH
Sbjct: 1251 RITLTKSVLSSIPVH 1265


>ref|XP_008806372.1| PREDICTED: putative ribonuclease H protein At1g65750 [Phoenix
           dactylifera]
          Length = 752

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 30/76 (39%), Positives = 52/76 (68%)
 Frame = -1

Query: 298 KRTLNHNLSKILGIRLMKGDEKYLGNPIMPRRGKISCFETLIEKIKSRIISWQWSSLSQA 119
           +R ++  + +ILG++  +G   YLG PI  RR +++   TL+++++SR+  W+ SSLS  
Sbjct: 248 ERRVHREIREILGMQ-EQGALDYLGVPITGRRLRVAECSTLVQRVQSRLEGWRASSLSMM 306

Query: 118 GRSTLIKSVASATPVH 71
           GR TL++SV S+ PV+
Sbjct: 307 GRLTLVRSVLSSMPVY 322


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 28/69 (40%), Positives = 43/69 (62%)
 Frame = -1

Query: 277  LSKILGIRLMKGDEKYLGNPIMPRRGKISCFETLIEKIKSRIISWQWSSLSQAGRSTLIK 98
            L ++LGI  ++G  KYLG P    R K+  FE ++ K+K R   W ++ LS AG+  +IK
Sbjct: 1097 LHRLLGIDNVRGGGKYLGLPEQLGRRKVELFEYIVTKVKERTEGWAYNYLSPAGKEIVIK 1156

Query: 97   SVASATPVH 71
            ++A A PV+
Sbjct: 1157 AIAMALPVY 1165


>ref|XP_009107566.1| PREDICTED: uncharacterized protein LOC103833219 [Brassica rapa]
          Length = 1182

 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 32/76 (42%), Positives = 43/76 (56%)
 Frame = -1

Query: 301 LKRTLNHNLSKILGIRLMKGDEKYLGNPIMPRRGKISCFETLIEKIKSRIISWQWSSLSQ 122
           +++  N  +  ILGI    G+ KYLG P      K+  F  L EK+  RI  W   +LSQ
Sbjct: 531 VRKENNIRVKHILGIEAEGGEAKYLGLPECFNGSKVKLFSYLKEKMGRRISGWHARTLSQ 590

Query: 121 AGRSTLIKSVASATPV 74
           AG+  +IK+VASA PV
Sbjct: 591 AGKEVMIKAVASALPV 606


>ref|XP_008340459.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 536

 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 29/75 (38%), Positives = 42/75 (56%)
 Frame = -1

Query: 301 LKRTLNHNLSKILGIRLMKGDEKYLGNPIMPRRGKISCFETLIEKIKSRIISWQWSSLSQ 122
           +KR     L++I G+  +   +KYLG P    R K  CF  L +++  R+ SWQ   LS 
Sbjct: 132 VKRPAQMKLAEIFGVNRVDRHDKYLGMPTFVGRNKSLCFGNLKDRLWKRLKSWQGKLLSA 191

Query: 121 AGRSTLIKSVASATP 77
           AG+  L+K+VA A P
Sbjct: 192 AGKEVLVKAVAQAIP 206


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