BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00019399
         (221 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010268240.1| PREDICTED: DNA-directed RNA polymerases II a...   133   5e-29
ref|XP_010942742.1| PREDICTED: DNA-directed RNA polymerases II, ...   130   4e-28
gb|AIZ74344.1| polymerase subunit [Pinus massoniana]                  129   8e-28
ref|XP_008779392.1| PREDICTED: DNA-directed RNA polymerases II, ...   129   8e-28
gb|ABK26380.1| unknown [Picea sitchensis]                             126   5e-27
ref|XP_009418594.1| PREDICTED: DNA-directed RNA polymerases II, ...   125   8e-27
ref|XP_011628850.1| PREDICTED: DNA-directed RNA polymerases II, ...   125   1e-26
ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ...   119   6e-25
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ...   118   2e-24
ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [S...   115   9e-24
ref|XP_012065243.1| PREDICTED: DNA-directed RNA polymerases II a...   115   1e-23
gb|AAK12101.1|AF323605_1 RNA polymerase I, II and III subunit RP...   115   1e-23
gb|AAK55847.1|AF266463_1 RNA polymerase subunit [Manihot esculenta]   115   1e-23
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases II a...   114   2e-23
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...   114   2e-23
ref|XP_010227403.1| PREDICTED: DNA-directed RNA polymerases II, ...   114   2e-23
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi...   114   2e-23
ref|XP_009616200.1| PREDICTED: DNA-directed RNA polymerases II a...   113   4e-23
ref|XP_009766465.1| PREDICTED: DNA-directed RNA polymerases II a...   113   6e-23
ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [S...   112   7e-23

>ref|XP_010268240.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
           [Nelumbo nucifera] gi|720039239|ref|XP_010268241.1|
           PREDICTED: DNA-directed RNA polymerases II and V subunit
           8A-like [Nelumbo nucifera]
          Length = 145

 Score =  133 bits (334), Expect = 5e-29
 Identities = 66/69 (95%), Positives = 68/69 (98%)
 Frame = +1

Query: 1   QGGRKSLADKFEYVMHGKLYKISEEGSGANVKVEIYASFGGLLMMLKGDPSNAANFELDQ 180
           Q GRKSLADKFEYVMHGKLYKISEEGSGANVKVEIYAS+GGLLM+LKGDPSNAANFELDQ
Sbjct: 77  QVGRKSLADKFEYVMHGKLYKISEEGSGANVKVEIYASYGGLLMLLKGDPSNAANFELDQ 136

Query: 181 RLFLLMRKV 207
           RLFLLMRKV
Sbjct: 137 RLFLLMRKV 145


>ref|XP_010942742.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Elaeis guineensis]
          Length = 145

 Score =  130 bits (326), Expect = 4e-28
 Identities = 65/69 (94%), Positives = 65/69 (94%)
 Frame = +1

Query: 1   QGGRKSLADKFEYVMHGKLYKISEEGSGANVKVEIYASFGGLLMMLKGDPSNAANFELDQ 180
           QG RKSLADKFEYVMHGKLYKISEE SG NVKVEIYASFGGLLMMLKGDPSNA NFELDQ
Sbjct: 77  QGQRKSLADKFEYVMHGKLYKISEESSGPNVKVEIYASFGGLLMMLKGDPSNATNFELDQ 136

Query: 181 RLFLLMRKV 207
           RLFLLMRKV
Sbjct: 137 RLFLLMRKV 145


>gb|AIZ74344.1| polymerase subunit [Pinus massoniana]
          Length = 145

 Score =  129 bits (324), Expect = 8e-28
 Identities = 64/69 (92%), Positives = 67/69 (97%)
 Frame = +1

Query: 1   QGGRKSLADKFEYVMHGKLYKISEEGSGANVKVEIYASFGGLLMMLKGDPSNAANFELDQ 180
           QGGRKSLADK+EYVM+GKLYKISEEGSGANVKVEI ASFGGLLM+LKGDPSNA NFELDQ
Sbjct: 77  QGGRKSLADKYEYVMYGKLYKISEEGSGANVKVEINASFGGLLMLLKGDPSNAGNFELDQ 136

Query: 181 RLFLLMRKV 207
           RLFLLMRKV
Sbjct: 137 RLFLLMRKV 145


>ref|XP_008779392.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Phoenix dactylifera]
          Length = 145

 Score =  129 bits (324), Expect = 8e-28
 Identities = 64/69 (92%), Positives = 65/69 (94%)
 Frame = +1

Query: 1   QGGRKSLADKFEYVMHGKLYKISEEGSGANVKVEIYASFGGLLMMLKGDPSNAANFELDQ 180
           QG RKSLADKFEYVMHGKLYKISEE SG NVKVE+YASFGGLLMMLKGDPSNA NFELDQ
Sbjct: 77  QGQRKSLADKFEYVMHGKLYKISEESSGPNVKVELYASFGGLLMMLKGDPSNATNFELDQ 136

Query: 181 RLFLLMRKV 207
           RLFLLMRKV
Sbjct: 137 RLFLLMRKV 145


>gb|ABK26380.1| unknown [Picea sitchensis]
          Length = 145

 Score =  126 bits (317), Expect = 5e-27
 Identities = 62/69 (89%), Positives = 66/69 (95%)
 Frame = +1

Query: 1   QGGRKSLADKFEYVMHGKLYKISEEGSGANVKVEIYASFGGLLMMLKGDPSNAANFELDQ 180
           QGGRKSLADK+EYVM+GKLY +SEEGSGANVKVEI ASFGGLLM+LKGDPSNA NFELDQ
Sbjct: 77  QGGRKSLADKYEYVMYGKLYNLSEEGSGANVKVEINASFGGLLMLLKGDPSNAGNFELDQ 136

Query: 181 RLFLLMRKV 207
           RLFLLMRKV
Sbjct: 137 RLFLLMRKV 145


>ref|XP_009418594.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Musa acuminata subsp. malaccensis]
          Length = 146

 Score =  125 bits (315), Expect = 8e-27
 Identities = 65/70 (92%), Positives = 65/70 (92%), Gaps = 1/70 (1%)
 Frame = +1

Query: 1   QGGRKSLADKFEYVMHGKLYKISEEGSGA-NVKVEIYASFGGLLMMLKGDPSNAANFELD 177
           Q GRKSLADKFEYVMHGKLYKISEE SG  NVKVEIYASFGGLLMMLKGDPSNAA FELD
Sbjct: 77  QAGRKSLADKFEYVMHGKLYKISEEASGGPNVKVEIYASFGGLLMMLKGDPSNAAQFELD 136

Query: 178 QRLFLLMRKV 207
           QRLFLLMRKV
Sbjct: 137 QRLFLLMRKV 146


>ref|XP_011628850.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B
           [Amborella trichopoda] gi|769794061|ref|XP_011628851.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B [Amborella trichopoda]
          Length = 144

 Score =  125 bits (314), Expect = 1e-26
 Identities = 63/69 (91%), Positives = 66/69 (95%)
 Frame = +1

Query: 1   QGGRKSLADKFEYVMHGKLYKISEEGSGANVKVEIYASFGGLLMMLKGDPSNAANFELDQ 180
           QGGRKSLADKFEYVMHGKLYKISE+ SG NVKVEIYASFGGLLM+L+GDPSNA NFELDQ
Sbjct: 77  QGGRKSLADKFEYVMHGKLYKISED-SGTNVKVEIYASFGGLLMLLRGDPSNAVNFELDQ 135

Query: 181 RLFLLMRKV 207
           RLFLLMRKV
Sbjct: 136 RLFLLMRKV 144


>ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Oryza brachyantha]
          Length = 147

 Score =  119 bits (299), Expect = 6e-25
 Identities = 61/71 (85%), Positives = 65/71 (91%), Gaps = 2/71 (2%)
 Frame = +1

Query: 1   QGGRKSLADKFEYVMHGKLYKISE--EGSGANVKVEIYASFGGLLMMLKGDPSNAANFEL 174
           Q GRK+LADK+EYVMHGKLYKISE  E SG N KVE+YASFGGLLMMLKGDPS+AANFEL
Sbjct: 77  QAGRKTLADKYEYVMHGKLYKISEDKETSGQNAKVEMYASFGGLLMMLKGDPSSAANFEL 136

Query: 175 DQRLFLLMRKV 207
           DQRLFLLMRKV
Sbjct: 137 DQRLFLLMRKV 147


>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like isoform X1 [Oryza brachyantha]
           gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X2
           [Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X3 [Oryza brachyantha]
           gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X4
           [Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X5 [Oryza brachyantha]
          Length = 146

 Score =  118 bits (295), Expect = 2e-24
 Identities = 59/70 (84%), Positives = 64/70 (91%), Gaps = 1/70 (1%)
 Frame = +1

Query: 1   QGGRKSLADKFEYVMHGKLYKISEEGSGANV-KVEIYASFGGLLMMLKGDPSNAANFELD 177
           Q GRK+LADK++YVMHGKLYKISE+GSG    KVEIYASFGGLLMMLKGDPS AANFELD
Sbjct: 77  QAGRKTLADKYDYVMHGKLYKISEDGSGGQATKVEIYASFGGLLMMLKGDPSTAANFELD 136

Query: 178 QRLFLLMRKV 207
           QRLFLL+RKV
Sbjct: 137 QRLFLLIRKV 146


>ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [Sorghum bicolor]
           gi|241917379|gb|EER90523.1| hypothetical protein
           SORBIDRAFT_01g001420 [Sorghum bicolor]
          Length = 145

 Score =  115 bits (289), Expect = 9e-24
 Identities = 56/69 (81%), Positives = 62/69 (89%)
 Frame = +1

Query: 1   QGGRKSLADKFEYVMHGKLYKISEEGSGANVKVEIYASFGGLLMMLKGDPSNAANFELDQ 180
           Q GRK+LAD +EYVMHGKLYKISE+ S  N KVEIYASFGGLLM+L+GDPS AA+FELDQ
Sbjct: 77  QAGRKTLADNYEYVMHGKLYKISEDTSSQNAKVEIYASFGGLLMLLRGDPSTAASFELDQ 136

Query: 181 RLFLLMRKV 207
           RLFLLMRKV
Sbjct: 137 RLFLLMRKV 145


>ref|XP_012065243.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
           [Jatropha curcas] gi|643737893|gb|KDP43918.1|
           hypothetical protein JCGZ_20928 [Jatropha curcas]
          Length = 146

 Score =  115 bits (288), Expect = 1e-23
 Identities = 54/69 (78%), Positives = 62/69 (89%)
 Frame = +1

Query: 1   QGGRKSLADKFEYVMHGKLYKISEEGSGANVKVEIYASFGGLLMMLKGDPSNAANFELDQ 180
           QG RK+LADK+EY+MHGKLYKISEEGSG NVK EI+ S+GGLLMMLKGDPS+   FELDQ
Sbjct: 78  QGARKTLADKYEYIMHGKLYKISEEGSGRNVKAEIFVSYGGLLMMLKGDPSHVNQFELDQ 137

Query: 181 RLFLLMRKV 207
           RLFLL+RK+
Sbjct: 138 RLFLLIRKL 146


>gb|AAK12101.1|AF323605_1 RNA polymerase I, II and III subunit RPB8, partial [Manihot
           esculenta]
          Length = 110

 Score =  115 bits (288), Expect = 1e-23
 Identities = 54/69 (78%), Positives = 63/69 (91%)
 Frame = +1

Query: 1   QGGRKSLADKFEYVMHGKLYKISEEGSGANVKVEIYASFGGLLMMLKGDPSNAANFELDQ 180
           QG RK+LADK+EY+MHGKLYKISEEGSG  VK EIY S+GGLLMMLKGDPS+ ++FELDQ
Sbjct: 42  QGARKTLADKYEYIMHGKLYKISEEGSGKAVKAEIYVSYGGLLMMLKGDPSHVSHFELDQ 101

Query: 181 RLFLLMRKV 207
           RLFLL+RK+
Sbjct: 102 RLFLLIRKL 110


>gb|AAK55847.1|AF266463_1 RNA polymerase subunit [Manihot esculenta]
          Length = 96

 Score =  115 bits (288), Expect = 1e-23
 Identities = 54/69 (78%), Positives = 63/69 (91%)
 Frame = +1

Query: 1   QGGRKSLADKFEYVMHGKLYKISEEGSGANVKVEIYASFGGLLMMLKGDPSNAANFELDQ 180
           QG RK+LADK+EY+MHGKLYKISEEGSG  VK EIY S+GGLLMMLKGDPS+ ++FELDQ
Sbjct: 28  QGARKTLADKYEYIMHGKLYKISEEGSGKAVKAEIYVSYGGLLMMLKGDPSHVSHFELDQ 87

Query: 181 RLFLLMRKV 207
           RLFLL+RK+
Sbjct: 88  RLFLLIRKL 96


>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A [Vitis
           vinifera] gi|731391203|ref|XP_010650676.1| PREDICTED:
           DNA-directed RNA polymerases II and V subunit 8A [Vitis
           vinifera] gi|296084252|emb|CBI24640.3| unnamed protein
           product [Vitis vinifera]
          Length = 145

 Score =  114 bits (286), Expect = 2e-23
 Identities = 56/69 (81%), Positives = 60/69 (86%)
 Frame = +1

Query: 1   QGGRKSLADKFEYVMHGKLYKISEEGSGANVKVEIYASFGGLLMMLKGDPSNAANFELDQ 180
           Q GRKSLADKFEYVMHGKLYKISEEGSG NVK  IY SFGGLLMML GDP+N A  +LDQ
Sbjct: 77  QAGRKSLADKFEYVMHGKLYKISEEGSGPNVKGVIYVSFGGLLMMLSGDPANTAKLDLDQ 136

Query: 181 RLFLLMRKV 207
           R+FLL+RKV
Sbjct: 137 RVFLLIRKV 145


>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score =  114 bits (285), Expect = 2e-23
 Identities = 58/70 (82%), Positives = 64/70 (91%), Gaps = 1/70 (1%)
 Frame = +1

Query: 1   QGGRKSLADKFEYVMHGKLYKISEEGS-GANVKVEIYASFGGLLMMLKGDPSNAANFELD 177
           Q GRK+LADKF+YVMHGKLYKISE+ S G   KVEIYASFGGLLMMLKGDPS+AA+FELD
Sbjct: 327 QAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLLMMLKGDPSSAASFELD 386

Query: 178 QRLFLLMRKV 207
           QRLFLL+RKV
Sbjct: 387 QRLFLLIRKV 396


>ref|XP_010227403.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Brachypodium distachyon]
          Length = 144

 Score =  114 bits (285), Expect = 2e-23
 Identities = 57/70 (81%), Positives = 63/70 (90%), Gaps = 1/70 (1%)
 Frame = +1

Query: 1   QGGRKSLADKFEYVMHGKLYKISEEGSGANV-KVEIYASFGGLLMMLKGDPSNAANFELD 177
           Q GRK+LADK++YVMHGKLYKISE+ SG    KVEIYASFGGLLM+LKGDPS+AAN ELD
Sbjct: 75  QAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVEIYASFGGLLMLLKGDPSSAANLELD 134

Query: 178 QRLFLLMRKV 207
           QRLFLLMRKV
Sbjct: 135 QRLFLLMRKV 144


>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
           gi|125598367|gb|EAZ38147.1| hypothetical protein
           OsJ_22498 [Oryza sativa Japonica Group]
          Length = 191

 Score =  114 bits (285), Expect = 2e-23
 Identities = 58/70 (82%), Positives = 64/70 (91%), Gaps = 1/70 (1%)
 Frame = +1

Query: 1   QGGRKSLADKFEYVMHGKLYKISEEGS-GANVKVEIYASFGGLLMMLKGDPSNAANFELD 177
           Q GRK+LADKF+YVMHGKLYKISE+ S G   KVEIYASFGGLLMMLKGDPS+AA+FELD
Sbjct: 122 QAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLLMMLKGDPSSAASFELD 181

Query: 178 QRLFLLMRKV 207
           QRLFLL+RKV
Sbjct: 182 QRLFLLIRKV 191


>ref|XP_009616200.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
           [Nicotiana tomentosiformis]
           gi|697124414|ref|XP_009616201.1| PREDICTED: DNA-directed
           RNA polymerases II and V subunit 8A-like [Nicotiana
           tomentosiformis] gi|697124416|ref|XP_009616202.1|
           PREDICTED: DNA-directed RNA polymerases II and V subunit
           8A-like [Nicotiana tomentosiformis]
          Length = 145

 Score =  113 bits (283), Expect = 4e-23
 Identities = 54/69 (78%), Positives = 62/69 (89%)
 Frame = +1

Query: 1   QGGRKSLADKFEYVMHGKLYKISEEGSGANVKVEIYASFGGLLMMLKGDPSNAANFELDQ 180
           QG +KSLADKFEYVMHGKLY+ISEEGSG +VK +I+ SFGGLLM L+GDPS AA FELDQ
Sbjct: 77  QGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLMQLRGDPSIAAKFELDQ 136

Query: 181 RLFLLMRKV 207
           +LFLL+RKV
Sbjct: 137 KLFLLLRKV 145


>ref|XP_009766465.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
           [Nicotiana sylvestris]
          Length = 145

 Score =  113 bits (282), Expect = 6e-23
 Identities = 53/69 (76%), Positives = 62/69 (89%)
 Frame = +1

Query: 1   QGGRKSLADKFEYVMHGKLYKISEEGSGANVKVEIYASFGGLLMMLKGDPSNAANFELDQ 180
           QG +KSLADKFEY+MHGKLY+ISEEGSG +VK +I+ SFGGLLM L+GDPS AA FELDQ
Sbjct: 77  QGNKKSLADKFEYIMHGKLYRISEEGSGKHVKADIFVSFGGLLMQLRGDPSIAAKFELDQ 136

Query: 181 RLFLLMRKV 207
           +LFLL+RKV
Sbjct: 137 KLFLLLRKV 145


>ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor]
           gi|241919960|gb|EER93104.1| hypothetical protein
           SORBIDRAFT_01g001330 [Sorghum bicolor]
          Length = 145

 Score =  112 bits (281), Expect = 7e-23
 Identities = 55/69 (79%), Positives = 61/69 (88%)
 Frame = +1

Query: 1   QGGRKSLADKFEYVMHGKLYKISEEGSGANVKVEIYASFGGLLMMLKGDPSNAANFELDQ 180
           Q GRK+LAD +EYVM GKLYKISE+ S  N KVEIYASFGGLLM+L+GDPS AA+FELDQ
Sbjct: 77  QAGRKTLADNYEYVMQGKLYKISEDTSSQNAKVEIYASFGGLLMLLRGDPSTAASFELDQ 136

Query: 181 RLFLLMRKV 207
           RLFLLMRKV
Sbjct: 137 RLFLLMRKV 145