BLASTX nr result
ID: Cinnamomum23_contig00018974
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00018974
(672 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AJO72443.1| hypothetical protein RF1, partial (chloroplast) [... 163 7e-52
ref|YP_009026939.1| photosystem I assembly protein Ycf1 (plastid... 197 4e-48
gb|AEX98725.1| photosystem I assembly protein Ycf1 (chloroplast)... 194 5e-47
ref|YP_007474425.1| hypothetical chloroplast RF1 (chloroplast) [... 194 5e-47
ref|YP_007474593.1| photosystem I assembly protein Ycf1 (chlorop... 193 6e-47
gb|AEX98809.1| photosystem I assembly protein Ycf1-like protein ... 192 1e-46
ref|YP_007474509.1| photosystem I assembly protein Ycf1 (chlorop... 192 1e-46
ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tuli... 189 9e-46
ref|YP_009048348.1| hypothetical chloroplast RF1 (chloroplast) [... 189 1e-45
ref|YP_004769771.1| hypothetical chloroplast RF19 [Magnolia kwan... 187 3e-45
gb|AIY33881.1| photosystem I assembly protein Ycf1 (chloroplast)... 147 3e-43
gb|ADD30909.1| putative RF1 protein (chloroplast) [Nelumbo nucif... 147 3e-43
gb|AFH01508.1| hypothetical chloroplast RF19 (chloroplast) [Nelu... 147 3e-43
gb|ACN49467.1| hypothetical chloroplast RF1 (chloroplast) [Nelum... 147 3e-43
ref|YP_009094007.1| hypothetical chloroplast RF19 (chloroplast) ... 147 3e-43
gb|AEX98391.1| photosystem I assembly protein Ycf1 (chloroplast)... 180 5e-43
ref|YP_006576172.1| Ycf1 (chloroplast) [Magnolia denudata] gi|34... 180 5e-43
gb|ADD30912.1| putative RF1 protein (chloroplast) [Ximenia ameri... 136 7e-43
ref|YP_004563925.1| hypothetical chloroplast RF1 [Nelumbo lutea]... 146 1e-42
ref|YP_008999908.1| hypothetical chloroplast RF19 [Petrosavia st... 129 1e-41
>gb|AJO72443.1| hypothetical protein RF1, partial (chloroplast) [Asarum contractum]
Length = 461
Score = 163 bits (413), Expect(2) = 7e-52
Identities = 86/140 (61%), Positives = 99/140 (70%), Gaps = 4/140 (2%)
Frame = -1
Query: 576 PDRKYLEWKIFDLFLRKNIDIESWTDTDTGTNINKMTKTETDYYQMIDKKDLFYLTIHQE 397
PDRKYLEW I + RKNIDIE+WT DTGTNI+K TKT T+ YQ+IDKKDLFYLTIHQ+
Sbjct: 113 PDRKYLEWGILNFCPRKNIDIETWTYMDTGTNISKDTKTGTNDYQIIDKKDLFYLTIHQK 172
Query: 396 INPPNQKKK---FFLMGMNKEMLYRPILNTKSWFFSEFVPLYDAYXXXXXXXXXXXXXXI 226
INP N+KKK F M MN+EMLYRP+ N + WFF+E V LYDAY
Sbjct: 173 INPSNKKKKKKLFDWMEMNEEMLYRPMSNLEPWFFTELVRLYDAYKIKPWIIPIKFFFFH 232
Query: 225 FNGNE-NISENKNINGNKKR 169
FNGNE N NKNINGN+K+
Sbjct: 233 FNGNEYNEYINKNINGNQKK 252
Score = 68.2 bits (165), Expect(2) = 7e-52
Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 12/68 (17%)
Frame = -3
Query: 169 DLRISSNQKEYLELKNRNQEEKEQLGHG-----------NIGSDARKRQKDF-EKDYTES 26
D ISSN+KEYLEL+NRN+E+KE+L G N+ S A+ +QKDF EKDY ES
Sbjct: 253 DPHISSNKKEYLELENRNREQKEELVQGDLVGSDAQNQKNLASGAQNQQKDFVEKDYAES 312
Query: 25 DIQKREKK 2
DI+KR KK
Sbjct: 313 DIKKRRKK 320
>ref|YP_009026939.1| photosystem I assembly protein Ycf1 (plastid) [Magnolia tripetala]
gi|608608461|gb|AHW52015.1| photosystem I assembly
protein Ycf1 [Magnolia tripetala]
Length = 1846
Score = 197 bits (501), Expect = 4e-48
Identities = 105/194 (54%), Positives = 125/194 (64%), Gaps = 2/194 (1%)
Frame = -1
Query: 576 PDRKYLEWKIFDLFLRKNIDIESWTDTDTGTNINKMTKTETDYYQMIDKKDLFYLTIHQE 397
PDRKYLEW+I + FLRKNIDIE WTD DTGTNINK TKT T+ YQ+IDKKDLFYLTIHQE
Sbjct: 1393 PDRKYLEWRILNFFLRKNIDIEIWTDIDTGTNINKNTKTGTNDYQIIDKKDLFYLTIHQE 1452
Query: 396 INPPNQKKKFFL--MGMNKEMLYRPILNTKSWFFSEFVPLYDAYXXXXXXXXXXXXXXIF 223
INP NQKK+FF MGMN+EML+RPI N + WFFSEFV LYDAY
Sbjct: 1453 INPSNQKKRFFFDWMGMNEEMLHRPISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNL 1512
Query: 222 NGNENISENKNINGNKKRIFVYHLIKKNILN*RIEIKKKKNSSATEILAQTHENDKKILK 43
NGNENISENKNIN N+K+ +K L +++K L N +K L+
Sbjct: 1513 NGNENISENKNINRNQKKDLRLSSNQKEYLELENRNQEEKEQLGQGNLGSDPRNRQKDLE 1572
Query: 42 RITRNRTFKNVKRK 1
+ + K ++K
Sbjct: 1573 KDSAESDIKKRRKK 1586
>gb|AEX98725.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia
officinalis subsp. biloba]
Length = 1863
Score = 194 bits (492), Expect = 5e-47
Identities = 104/193 (53%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Frame = -1
Query: 576 PDRKYLEWKIFDLFLRKNIDIESWTDTDTGTNINKMTKTETDYYQMIDKKDLFYLTIHQE 397
PDRKYLEW+I + FLRKNIDIE WTD DTGTNINK TKT T+ YQ+IDKKDLFYLTIHQE
Sbjct: 1411 PDRKYLEWRILNFFLRKNIDIEIWTDIDTGTNINKNTKTGTNDYQIIDKKDLFYLTIHQE 1470
Query: 396 INPPNQKKKFF-LMGMNKEMLYRPILNTKSWFFSEFVPLYDAYXXXXXXXXXXXXXXIFN 220
INP N+KK FF MGMN+EML+RPI N + WFFSEFV LYDAY N
Sbjct: 1471 INPSNKKKVFFDWMGMNEEMLHRPISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNLN 1530
Query: 219 GNENISENKNINGNKKRIFVYHLIKKNILN*RIEIKKKKNSSATEILAQTHENDKKILKR 40
GNENISENKNIN N+K+ +K L +++K L N +K L++
Sbjct: 1531 GNENISENKNINRNQKKDLRLSSNQKEYLELENRNQEEKEQLGQGNLGSDPRNRQKDLEK 1590
Query: 39 ITRNRTFKNVKRK 1
+ K ++K
Sbjct: 1591 DSAESDIKKRRKK 1603
>ref|YP_007474425.1| hypothetical chloroplast RF1 (chloroplast) [Magnolia officinalis]
gi|372862476|gb|AEX98557.1| hypothetical chloroplast RF1
(chloroplast) [Magnolia officinalis]
Length = 1863
Score = 194 bits (492), Expect = 5e-47
Identities = 104/193 (53%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Frame = -1
Query: 576 PDRKYLEWKIFDLFLRKNIDIESWTDTDTGTNINKMTKTETDYYQMIDKKDLFYLTIHQE 397
PDRKYLEW+I + FLRKNIDIE WTD DTGTNINK TKT T+ YQ+IDKKDLFYLTIHQE
Sbjct: 1411 PDRKYLEWRILNFFLRKNIDIEIWTDIDTGTNINKNTKTGTNDYQIIDKKDLFYLTIHQE 1470
Query: 396 INPPNQKKKFF-LMGMNKEMLYRPILNTKSWFFSEFVPLYDAYXXXXXXXXXXXXXXIFN 220
INP N+KK FF MGMN+EML+RPI N + WFFSEFV LYDAY N
Sbjct: 1471 INPSNKKKVFFDWMGMNEEMLHRPISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNLN 1530
Query: 219 GNENISENKNINGNKKRIFVYHLIKKNILN*RIEIKKKKNSSATEILAQTHENDKKILKR 40
GNENISENKNIN N+K+ +K L +++K L N +K L++
Sbjct: 1531 GNENISENKNINRNQKKDLRLSSNQKEYLELENRNQEEKEQLGQGNLGSDPRNRQKDLEK 1590
Query: 39 ITRNRTFKNVKRK 1
+ K ++K
Sbjct: 1591 DSAESDIKKRRKK 1603
>ref|YP_007474593.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia
grandiflora] gi|372862899|gb|AEX98975.1| photosystem I
assembly protein Ycf1 (chloroplast) [Magnolia
grandiflora]
Length = 1843
Score = 193 bits (491), Expect = 6e-47
Identities = 105/194 (54%), Positives = 126/194 (64%), Gaps = 2/194 (1%)
Frame = -1
Query: 576 PDRKYLEWKIFDLFLRKNIDIESWTDTDTGTNINKMTKTETDYYQMIDKKDLFYLTIHQE 397
PDRKYLEW+I + FLRKNIDIE+WTD DTGTNINK TKT T+ YQ+IDKKDLFYLTIHQE
Sbjct: 1391 PDRKYLEWRILNFFLRKNIDIETWTDIDTGTNINKNTKTGTNDYQIIDKKDLFYLTIHQE 1450
Query: 396 INPPNQKKKFFL--MGMNKEMLYRPILNTKSWFFSEFVPLYDAYXXXXXXXXXXXXXXIF 223
INP N KK+FFL MGMN+EML+RPI N + WFFSEFV LYDAY
Sbjct: 1451 INPSN-KKRFFLDWMGMNEEMLHRPISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNL 1509
Query: 222 NGNENISENKNINGNKKRIFVYHLIKKNILN*RIEIKKKKNSSATEILAQTHENDKKILK 43
NGNENISENKNIN N+K+ +K L +++K L N +K L+
Sbjct: 1510 NGNENISENKNINRNQKKDLRLSSNQKEYLELENRNQEEKEQLGQGNLGSDPRNRQKDLE 1569
Query: 42 RITRNRTFKNVKRK 1
+ + K ++K
Sbjct: 1570 KDSAESDIKKRRKK 1583
>gb|AEX98809.1| photosystem I assembly protein Ycf1-like protein (chloroplast)
[Magnolia officinalis subsp. biloba]
Length = 1863
Score = 192 bits (488), Expect = 1e-46
Identities = 103/193 (53%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Frame = -1
Query: 576 PDRKYLEWKIFDLFLRKNIDIESWTDTDTGTNINKMTKTETDYYQMIDKKDLFYLTIHQE 397
PDRKYLEW+I + FLRKNIDIE WTD DTGTNINK TKT T+ YQ+IDKKDLFYLTIHQE
Sbjct: 1411 PDRKYLEWRILNFFLRKNIDIEIWTDIDTGTNINKNTKTGTNDYQIIDKKDLFYLTIHQE 1470
Query: 396 INPPNQKKKFF-LMGMNKEMLYRPILNTKSWFFSEFVPLYDAYXXXXXXXXXXXXXXIFN 220
INP N+K+ FF MGMN+EML+RPI N + WFFSEFV LYDAY N
Sbjct: 1471 INPSNKKRFFFDWMGMNEEMLHRPISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNLN 1530
Query: 219 GNENISENKNINGNKKRIFVYHLIKKNILN*RIEIKKKKNSSATEILAQTHENDKKILKR 40
GNENISENKNIN N+K+ +K L +++K L N +K L++
Sbjct: 1531 GNENISENKNINRNQKKDLRLSSNQKEYLELENRNQEEKEQLGQGNLGSDPRNRQKDLEK 1590
Query: 39 ITRNRTFKNVKRK 1
+ K ++K
Sbjct: 1591 DSAESDIKKRRKK 1603
>ref|YP_007474509.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia
officinalis subsp. biloba] gi|372862561|gb|AEX98641.1|
photosystem I assembly protein Ycf1 (chloroplast)
[Magnolia officinalis subsp. biloba]
Length = 1863
Score = 192 bits (488), Expect = 1e-46
Identities = 103/193 (53%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Frame = -1
Query: 576 PDRKYLEWKIFDLFLRKNIDIESWTDTDTGTNINKMTKTETDYYQMIDKKDLFYLTIHQE 397
PDRKYLEW+I + FLRKNIDIE WTD DTGTNINK TKT T+ YQ+IDKKDLFYLTIHQE
Sbjct: 1411 PDRKYLEWRILNFFLRKNIDIEIWTDIDTGTNINKNTKTGTNDYQIIDKKDLFYLTIHQE 1470
Query: 396 INPPNQKKKFF-LMGMNKEMLYRPILNTKSWFFSEFVPLYDAYXXXXXXXXXXXXXXIFN 220
INP N+K+ FF MGMN+EML+RPI N + WFFSEFV LYDAY N
Sbjct: 1471 INPSNKKRFFFDWMGMNEEMLHRPISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNLN 1530
Query: 219 GNENISENKNINGNKKRIFVYHLIKKNILN*RIEIKKKKNSSATEILAQTHENDKKILKR 40
GNENISENKNIN N+K+ +K L +++K L N +K L++
Sbjct: 1531 GNENISENKNINRNQKKDLRLSSNQKEYLELENRNQEEKEQLGQGNLGSDPRNRQKDLEK 1590
Query: 39 ITRNRTFKNVKRK 1
+ K ++K
Sbjct: 1591 DSAESDIKKRRKK 1603
>ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tulipifera]
gi|118574755|sp|Q0G9G1.1|TI214_LIRTU RecName:
Full=Protein TIC 214; AltName: Full=Translocon at the
inner envelope membrane of chloroplasts 214;
Short=AtTIC214 (chloroplast) [Liriodendron tulipifera]
gi|113201052|gb|ABI32567.1| hypothetical chloroplast RF1
[Liriodendron tulipifera]
Length = 1835
Score = 189 bits (481), Expect = 9e-46
Identities = 102/194 (52%), Positives = 121/194 (62%), Gaps = 2/194 (1%)
Frame = -1
Query: 576 PDRKYLEWKIFDLFLRKNIDIESWTDTDTGTNINKMTKTETDYYQMIDKKDLFYLTIHQE 397
PDRKYLEW+I + FLRKNIDIE+W D DTGTNINK KT T+ YQ+IDKKDLFYL IHQE
Sbjct: 1382 PDRKYLEWRILNFFLRKNIDIETWIDIDTGTNINKNAKTGTNDYQIIDKKDLFYLPIHQE 1441
Query: 396 INPPNQKKKFFL--MGMNKEMLYRPILNTKSWFFSEFVPLYDAYXXXXXXXXXXXXXXIF 223
INP NQK+ FF MGMN+EMLYRPI N + WFFSEFV LYDAY
Sbjct: 1442 INPSNQKQGFFFDWMGMNEEMLYRPISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNL 1501
Query: 222 NGNENISENKNINGNKKRIFVYHLIKKNILN*RIEIKKKKNSSATEILAQTHENDKKILK 43
NGNENISENKNIN N+K+ +K L +++K L N +K L+
Sbjct: 1502 NGNENISENKNINRNQKKDLRLSSNQKEYLELENRNQEEKEQLGQGNLGSDPRNRQKDLE 1561
Query: 42 RITRNRTFKNVKRK 1
+ K ++K
Sbjct: 1562 KDYAESDIKKRRKK 1575
>ref|YP_009048348.1| hypothetical chloroplast RF1 (chloroplast) [Magnolia yunnanensis]
gi|573015504|gb|AHF72082.1| hypothetical chloroplast RF1
(chloroplast) [Magnolia yunnanensis]
Length = 1844
Score = 189 bits (480), Expect = 1e-45
Identities = 103/194 (53%), Positives = 123/194 (63%), Gaps = 2/194 (1%)
Frame = -1
Query: 576 PDRKYLEWKIFDLFLRKNIDIESWTDTDTGTNINKMTKTETDYYQMIDKKDLFYLTIHQE 397
PDRKYLEW+I + FLRKNIDIE+WTD DTGTNINK TKT T+ YQ+IDKKDLFYLTIHQE
Sbjct: 1393 PDRKYLEWRILNFFLRKNIDIETWTDIDTGTNINKNTKTGTNDYQIIDKKDLFYLTIHQE 1452
Query: 396 INPPNQKKKFFL--MGMNKEMLYRPILNTKSWFFSEFVPLYDAYXXXXXXXXXXXXXXIF 223
INP NQKK FF MGMN+EML+RPI N + WFFSEFV LYDAY
Sbjct: 1453 INPSNQKKTFFFDWMGMNEEMLHRPISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNL 1512
Query: 222 NGNENISENKNINGNKKRIFVYHLIKKNILN*RIEIKKKKNSSATEILAQTHENDKKILK 43
NGNEN ENKNIN N+K+ +K L +++K L N +K L+
Sbjct: 1513 NGNEN--ENKNINRNQKKDLRLSSNQKEYLELENRNQEEKEQLGQGNLGSDPRNRQKDLE 1570
Query: 42 RITRNRTFKNVKRK 1
+ + K ++K
Sbjct: 1571 KDSAESDIKKRRKK 1584
>ref|YP_004769771.1| hypothetical chloroplast RF19 [Magnolia kwangsiensis]
gi|302424237|gb|ADL39113.1| hypothetical chloroplast RF19
[Magnolia kwangsiensis]
Length = 1838
Score = 187 bits (476), Expect = 3e-45
Identities = 102/194 (52%), Positives = 124/194 (63%), Gaps = 2/194 (1%)
Frame = -1
Query: 576 PDRKYLEWKIFDLFLRKNIDIESWTDTDTGTNINKMTKTETDYYQMIDKKDLFYLTIHQE 397
PDRKYLEW+I + FLRKNIDIE+WTD DTGT+INK TKT T+ YQ+IDKKDLFYLTIHQE
Sbjct: 1387 PDRKYLEWRILNFFLRKNIDIETWTDIDTGTDINKNTKTGTNDYQIIDKKDLFYLTIHQE 1446
Query: 396 INPPNQKKKFFL--MGMNKEMLYRPILNTKSWFFSEFVPLYDAYXXXXXXXXXXXXXXIF 223
INP KK+FF MGMN+EML+RPI N + WFFSEFV LYDAY
Sbjct: 1447 INP--SKKRFFFDWMGMNEEMLHRPISNLEPWFFSEFVLLYDAYKIKPWIIPIKLLIFNL 1504
Query: 222 NGNENISENKNINGNKKRIFVYHLIKKNILN*RIEIKKKKNSSATEILAQTHENDKKILK 43
NGNENISENKNIN N+K+ +K L +++K L N +K L+
Sbjct: 1505 NGNENISENKNINRNQKKDLRLSSNQKEYLELENRNQEEKEQLGQGNLGSDPRNRQKDLE 1564
Query: 42 RITRNRTFKNVKRK 1
+ + K ++K
Sbjct: 1565 KDSAESDIKKRRKK 1578
>gb|AIY33881.1| photosystem I assembly protein Ycf1 (chloroplast) [Nelumbo nucifera]
Length = 1839
Score = 147 bits (370), Expect(2) = 3e-43
Identities = 81/151 (53%), Positives = 94/151 (62%), Gaps = 6/151 (3%)
Frame = -1
Query: 573 DRKYLEWKIFDLFL--RKNIDIESWTDTDTGTNINKMTKTETDYYQMIDK---KDLFYLT 409
DRKY +W+I L RK IDIE W + DTG NINK TKT T+ YQ IDK KDLFYLT
Sbjct: 1368 DRKYFDWRILHFCLKNRKKIDIEVWANMDTGANINKKTKTGTNDYQKIDKFYKKDLFYLT 1427
Query: 408 IHQEINPPNQKKKFF-LMGMNKEMLYRPILNTKSWFFSEFVPLYDAYXXXXXXXXXXXXX 232
IHQEINP N+KK F MGMN+E+L R I N + WFFSE + LYD Y
Sbjct: 1428 IHQEINPSNKKKNLFDWMGMNEEILNRSISNLELWFFSELLLLYDTYKIKPWGIPIKLLL 1487
Query: 231 XIFNGNENISENKNINGNKKRIFVYHLIKKN 139
+N NEN+SENKNIN +K+ F I N
Sbjct: 1488 LNWNRNENVSENKNINEKQKKDFRISRISSN 1518
Score = 55.8 bits (133), Expect(2) = 3e-43
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 10/64 (15%)
Frame = -3
Query: 163 RISSNQKEYLELKNRNQEEKEQLGHGNIGSDAR----------KRQKDFEKDYTESDIQK 14
RISSN+K+ LEL+NRNQEEK G G++G DA+ +Q D ++ Y ESDI+
Sbjct: 1514 RISSNEKKILELENRNQEEKGPPGQGDLGPDAQNQENLGSILSNQQNDLKEYYAESDIKN 1573
Query: 13 REKK 2
KK
Sbjct: 1574 HRKK 1577
>gb|ADD30909.1| putative RF1 protein (chloroplast) [Nelumbo nucifera]
Length = 1839
Score = 147 bits (370), Expect(2) = 3e-43
Identities = 81/151 (53%), Positives = 94/151 (62%), Gaps = 6/151 (3%)
Frame = -1
Query: 573 DRKYLEWKIFDLFL--RKNIDIESWTDTDTGTNINKMTKTETDYYQMIDK---KDLFYLT 409
DRKY +W+I L RK IDIE W + DTG NINK TKT T+ YQ IDK KDLFYLT
Sbjct: 1368 DRKYFDWRILHFCLKNRKKIDIEVWANMDTGANINKKTKTGTNDYQKIDKFYKKDLFYLT 1427
Query: 408 IHQEINPPNQKKKFF-LMGMNKEMLYRPILNTKSWFFSEFVPLYDAYXXXXXXXXXXXXX 232
IHQEINP N+KK F MGMN+E+L R I N + WFFSE + LYD Y
Sbjct: 1428 IHQEINPSNKKKNLFDWMGMNEEILNRSISNLELWFFSELLLLYDTYKIKPWGIPIKLLL 1487
Query: 231 XIFNGNENISENKNINGNKKRIFVYHLIKKN 139
+N NEN+SENKNIN +K+ F I N
Sbjct: 1488 LNWNRNENVSENKNINEKQKKDFRISRISSN 1518
Score = 55.8 bits (133), Expect(2) = 3e-43
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 10/64 (15%)
Frame = -3
Query: 163 RISSNQKEYLELKNRNQEEKEQLGHGNIGSDAR----------KRQKDFEKDYTESDIQK 14
RISSN+K+ LEL+NRNQEEK G G++G DA+ +Q D ++ Y ESDI+
Sbjct: 1514 RISSNEKKILELENRNQEEKGPPGQGDLGPDAQNQENLGSILSNQQNDLKEYYAESDIKN 1573
Query: 13 REKK 2
KK
Sbjct: 1574 HRKK 1577
>gb|AFH01508.1| hypothetical chloroplast RF19 (chloroplast) [Nelumbo nucifera]
Length = 1839
Score = 147 bits (370), Expect(2) = 3e-43
Identities = 81/151 (53%), Positives = 94/151 (62%), Gaps = 6/151 (3%)
Frame = -1
Query: 573 DRKYLEWKIFDLFL--RKNIDIESWTDTDTGTNINKMTKTETDYYQMIDK---KDLFYLT 409
DRKY +W+I L RK IDIE W + DTG NINK TKT T+ YQ IDK KDLFYLT
Sbjct: 1368 DRKYFDWRILHFCLKNRKKIDIEVWANMDTGANINKKTKTGTNDYQKIDKFYKKDLFYLT 1427
Query: 408 IHQEINPPNQKKKFF-LMGMNKEMLYRPILNTKSWFFSEFVPLYDAYXXXXXXXXXXXXX 232
IHQEINP N+KK F MGMN+E+L R I N + WFFSE + LYD Y
Sbjct: 1428 IHQEINPSNKKKNLFDWMGMNEEILNRSISNLELWFFSELLLLYDTYKIKPWGIPIKLLL 1487
Query: 231 XIFNGNENISENKNINGNKKRIFVYHLIKKN 139
+N NEN+SENKNIN +K+ F I N
Sbjct: 1488 LNWNRNENVSENKNINEKQKKDFRISRISSN 1518
Score = 55.8 bits (133), Expect(2) = 3e-43
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 10/64 (15%)
Frame = -3
Query: 163 RISSNQKEYLELKNRNQEEKEQLGHGNIGSDAR----------KRQKDFEKDYTESDIQK 14
RISSN+K+ LEL+NRNQEEK G G++G DA+ +Q D ++ Y ESDI+
Sbjct: 1514 RISSNEKKILELENRNQEEKGPPGQGDLGPDAQNQENLGSILSNQQNDLKEYYAESDIKN 1573
Query: 13 REKK 2
KK
Sbjct: 1574 HRKK 1577
>gb|ACN49467.1| hypothetical chloroplast RF1 (chloroplast) [Nelumbo nucifera]
Length = 1839
Score = 147 bits (370), Expect(2) = 3e-43
Identities = 81/151 (53%), Positives = 94/151 (62%), Gaps = 6/151 (3%)
Frame = -1
Query: 573 DRKYLEWKIFDLFL--RKNIDIESWTDTDTGTNINKMTKTETDYYQMIDK---KDLFYLT 409
DRKY +W+I L RK IDIE W + DTG NINK TKT T+ YQ IDK KDLFYLT
Sbjct: 1368 DRKYFDWRILHFCLKNRKKIDIEVWANMDTGANINKKTKTGTNDYQKIDKFYKKDLFYLT 1427
Query: 408 IHQEINPPNQKKKFF-LMGMNKEMLYRPILNTKSWFFSEFVPLYDAYXXXXXXXXXXXXX 232
IHQEINP N+KK F MGMN+E+L R I N + WFFSE + LYD Y
Sbjct: 1428 IHQEINPSNKKKNLFDWMGMNEEILNRSISNLELWFFSELLLLYDTYKIKPWGIPIKLLL 1487
Query: 231 XIFNGNENISENKNINGNKKRIFVYHLIKKN 139
+N NEN+SENKNIN +K+ F I N
Sbjct: 1488 LNWNRNENVSENKNINEKQKKDFRISRISSN 1518
Score = 55.8 bits (133), Expect(2) = 3e-43
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 10/64 (15%)
Frame = -3
Query: 163 RISSNQKEYLELKNRNQEEKEQLGHGNIGSDAR----------KRQKDFEKDYTESDIQK 14
RISSN+K+ LEL+NRNQEEK G G++G DA+ +Q D ++ Y ESDI+
Sbjct: 1514 RISSNEKKILELENRNQEEKGPPGQGDLGPDAQNQENLGSILSNQQNDLKEYYAESDIKN 1573
Query: 13 REKK 2
KK
Sbjct: 1574 HRKK 1577
>ref|YP_009094007.1| hypothetical chloroplast RF19 (chloroplast) [Nelumbo nucifera]
gi|519666969|gb|AGO98581.1| hypothetical chloroplast RF19
(chloroplast) [Nelumbo nucifera]
Length = 1520
Score = 147 bits (370), Expect(2) = 3e-43
Identities = 81/151 (53%), Positives = 94/151 (62%), Gaps = 6/151 (3%)
Frame = -1
Query: 573 DRKYLEWKIFDLFL--RKNIDIESWTDTDTGTNINKMTKTETDYYQMIDK---KDLFYLT 409
DRKY +W+I L RK IDIE W + DTG NINK TKT T+ YQ IDK KDLFYLT
Sbjct: 1049 DRKYFDWRILHFCLKNRKKIDIEVWANMDTGANINKKTKTGTNDYQKIDKFYKKDLFYLT 1108
Query: 408 IHQEINPPNQKKKFF-LMGMNKEMLYRPILNTKSWFFSEFVPLYDAYXXXXXXXXXXXXX 232
IHQEINP N+KK F MGMN+E+L R I N + WFFSE + LYD Y
Sbjct: 1109 IHQEINPSNKKKNLFDWMGMNEEILNRSISNLELWFFSELLLLYDTYKIKPWGIPIKLLL 1168
Query: 231 XIFNGNENISENKNINGNKKRIFVYHLIKKN 139
+N NEN+SENKNIN +K+ F I N
Sbjct: 1169 LNWNRNENVSENKNINEKQKKDFRISRISSN 1199
Score = 55.8 bits (133), Expect(2) = 3e-43
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 10/64 (15%)
Frame = -3
Query: 163 RISSNQKEYLELKNRNQEEKEQLGHGNIGSDAR----------KRQKDFEKDYTESDIQK 14
RISSN+K+ LEL+NRNQEEK G G++G DA+ +Q D ++ Y ESDI+
Sbjct: 1195 RISSNEKKILELENRNQEEKGPPGQGDLGPDAQNQENLGSILSNQQNDLKEYYAESDIKN 1254
Query: 13 REKK 2
KK
Sbjct: 1255 HRKK 1258
>gb|AEX98391.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia denudata]
Length = 1863
Score = 180 bits (457), Expect = 5e-43
Identities = 99/193 (51%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Frame = -1
Query: 576 PDRKYLEWKIFDLFLRKNIDIESWTDTDTGTNINKMTKTETDYYQMIDKKDLFYLTIHQE 397
PDRKYLE +I FLRKNIDIE+WTD DTGTNINK TKT + YQ+IDKK+LFYLTIHQE
Sbjct: 1411 PDRKYLEGRILHFFLRKNIDIETWTDIDTGTNINKNTKTGANDYQIIDKKNLFYLTIHQE 1470
Query: 396 INPPNQKKKFF-LMGMNKEMLYRPILNTKSWFFSEFVPLYDAYXXXXXXXXXXXXXXIFN 220
INP N+K FF MGMN+EML+RPI N + WFFSEFV YDAY N
Sbjct: 1471 INPSNKKTFFFDWMGMNEEMLHRPISNLEPWFFSEFVLPYDAYKIKPWIIPIKLLIFNLN 1530
Query: 219 GNENISENKNINGNKKRIFVYHLIKKNILN*RIEIKKKKNSSATEILAQTHENDKKILKR 40
GNENISENKNIN N+K+ +K L +++K + L N +K L++
Sbjct: 1531 GNENISENKNINRNQKKDLRLSSNQKEYLELENRNQEEKEQLSQGNLGSDPRNRQKDLEK 1590
Query: 39 ITRNRTFKNVKRK 1
+ K ++K
Sbjct: 1591 DSAESDIKKRRKK 1603
>ref|YP_006576172.1| Ycf1 (chloroplast) [Magnolia denudata] gi|343887596|gb|AEM65275.1|
Ycf1 [Magnolia denudata]
Length = 1863
Score = 180 bits (457), Expect = 5e-43
Identities = 99/193 (51%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Frame = -1
Query: 576 PDRKYLEWKIFDLFLRKNIDIESWTDTDTGTNINKMTKTETDYYQMIDKKDLFYLTIHQE 397
PDRKYLE +I FLRKNIDIE+WTD DTGTNINK TKT + YQ+IDKK+LFYLTIHQE
Sbjct: 1411 PDRKYLEGRILHFFLRKNIDIETWTDIDTGTNINKNTKTGANDYQIIDKKNLFYLTIHQE 1470
Query: 396 INPPNQKKKFF-LMGMNKEMLYRPILNTKSWFFSEFVPLYDAYXXXXXXXXXXXXXXIFN 220
INP N+K FF MGMN+EML+RPI N + WFFSEFV YDAY N
Sbjct: 1471 INPSNKKTFFFDWMGMNEEMLHRPISNLEPWFFSEFVLPYDAYKIKPWIIPIKLLIFNLN 1530
Query: 219 GNENISENKNINGNKKRIFVYHLIKKNILN*RIEIKKKKNSSATEILAQTHENDKKILKR 40
GNENISENKNIN N+K+ +K L +++K + L N +K L++
Sbjct: 1531 GNENISENKNINRNQKKDLRLSSNQKEYLELENRNQEEKEQLSQGNLGSDPRNRQKDLEK 1590
Query: 39 ITRNRTFKNVKRK 1
+ K ++K
Sbjct: 1591 DSAESDIKKRRKK 1603
>gb|ADD30912.1| putative RF1 protein (chloroplast) [Ximenia americana]
Length = 1895
Score = 136 bits (343), Expect(2) = 7e-43
Identities = 79/143 (55%), Positives = 93/143 (65%), Gaps = 7/143 (4%)
Frame = -1
Query: 576 PDRKYLEWKIFDLFLRKNIDIESWTDTDTGTNINKMTKTETDYYQM---IDKKDLFYL-- 412
P+RKYL+W+I LRK +DIESW D D TN NK TKT T+ YQ+ IDKK LFYL
Sbjct: 1434 PNRKYLDWRIIHFCLRKKVDIESWIDID--TNSNKNTKTGTNNYQIIDKIDKKSLFYLYP 1491
Query: 411 TIHQEINPPNQKKKFFL--MGMNKEMLYRPILNTKSWFFSEFVPLYDAYXXXXXXXXXXX 238
TIHQEINP N K+FFL MGMN+E+L RPI N + WFF EFV LY+ Y
Sbjct: 1492 TIHQEINPSN-PKRFFLDWMGMNEEILNRPISNMRLWFFPEFVLLYNGYKIKPWVIPIKL 1550
Query: 237 XXXIFNGNENISENKNINGNKKR 169
F NEN+ ENKNING +K+
Sbjct: 1551 LLLNF--NENVRENKNINGKQKK 1571
Score = 65.1 bits (157), Expect(2) = 7e-43
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 10/66 (15%)
Frame = -3
Query: 169 DLRISSNQKEYLELKNRNQEEKEQLGHGNIGSDAR----------KRQKDFEKDYTESDI 20
DL ISSN+K+ ELKNRNQEEKE G G+ GSD + +QKD E+DY S++
Sbjct: 1572 DLFISSNEKQSFELKNRNQEEKEPTGQGDFGSDIQNQENLGSPLSNQQKDVEEDYARSNM 1631
Query: 19 QKREKK 2
+KR+KK
Sbjct: 1632 KKRKKK 1637
>ref|YP_004563925.1| hypothetical chloroplast RF1 [Nelumbo lutea]
gi|224474194|gb|ACN49383.1| hypothetical chloroplast RF1
[Nelumbo lutea]
Length = 1839
Score = 146 bits (369), Expect(2) = 1e-42
Identities = 81/151 (53%), Positives = 94/151 (62%), Gaps = 6/151 (3%)
Frame = -1
Query: 573 DRKYLEWKIFDLFL--RKNIDIESWTDTDTGTNINKMTKTETDYYQMIDK---KDLFYLT 409
DRKYL+W+I L RK IDIE W + DTG NINK TKT T+ YQ IDK KDLFYLT
Sbjct: 1368 DRKYLDWRILHFCLKNRKKIDIEVWANMDTGANINKKTKTGTNDYQKIDKFYKKDLFYLT 1427
Query: 408 IHQEINPPNQKKKFF-LMGMNKEMLYRPILNTKSWFFSEFVPLYDAYXXXXXXXXXXXXX 232
IHQEINP N+KK F MGMN+E+L R I N + WFF E + LYD Y
Sbjct: 1428 IHQEINPSNKKKNLFDWMGMNEEILNRSISNLELWFFPELLLLYDTYKIKPWGIPIKLLL 1487
Query: 231 XIFNGNENISENKNINGNKKRIFVYHLIKKN 139
+N NEN+SENKNIN +K+ F I N
Sbjct: 1488 LNWNRNENVSENKNINEKQKKDFRISRISSN 1518
Score = 54.3 bits (129), Expect(2) = 1e-42
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 10/64 (15%)
Frame = -3
Query: 163 RISSNQKEYLELKNRNQEEKEQLGHGNIGSDAR----------KRQKDFEKDYTESDIQK 14
RISSN+K+ LE +NRNQEEK G G++G DA+ +Q D ++ Y ESDI+
Sbjct: 1514 RISSNEKKILEFENRNQEEKGPPGQGDLGPDAQNQENLGSILSNQQNDLKEYYAESDIKN 1573
Query: 13 REKK 2
KK
Sbjct: 1574 HRKK 1577
>ref|YP_008999908.1| hypothetical chloroplast RF19 [Petrosavia stellaris]
gi|554518489|gb|AGY95360.1| hypothetical chloroplast RF19
[Petrosavia stellaris]
Length = 1882
Score = 129 bits (325), Expect(2) = 1e-41
Identities = 68/136 (50%), Positives = 87/136 (63%), Gaps = 1/136 (0%)
Frame = -1
Query: 573 DRKYLEWKIFDLFLRKNIDIESWTDTDTGTNINKMTKTETDYYQMIDKKDLFYLTIHQEI 394
DRKY + +I LRK IDIE+WT+ T INK TK +T+ Y+ ++KKD+F L IHQ I
Sbjct: 1421 DRKYFDCQILRFCLRKAIDIETWTNMHIVTKINKNTKAQTNNYKKLEKKDIFSLKIHQGI 1480
Query: 393 NPPNQKKKFF-LMGMNKEMLYRPILNTKSWFFSEFVPLYDAYXXXXXXXXXXXXXXIFNG 217
NP N+KKK F MGMN+E LYR ILN + WFF EF+ L+D Y F+
Sbjct: 1481 NPSNKKKKLFDWMGMNQERLYRTILNLEPWFFPEFLLLFDVYKMKPWIIPIKLLLLNFHL 1540
Query: 216 NENISENKNINGNKKR 169
EN S+NKNIN N+K+
Sbjct: 1541 YENRSQNKNININQKK 1556
Score = 67.8 bits (164), Expect(2) = 1e-41
Identities = 36/66 (54%), Positives = 43/66 (65%), Gaps = 10/66 (15%)
Frame = -3
Query: 169 DLRISSNQKEYLELKNRNQEEKEQLG----------HGNIGSDARKRQKDFEKDYTESDI 20
D ISSNQKEYLEL+N NQE+ EQ G GN+GSD RK++K E+DY DI
Sbjct: 1557 DPHISSNQKEYLELENSNQEKNEQQGQGDLVFDIQNQGNLGSDLRKKKKHVEEDYAGPDI 1616
Query: 19 QKREKK 2
+KR KK
Sbjct: 1617 KKRRKK 1622