BLASTX nr result
ID: Cinnamomum23_contig00018509
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00018509
(764 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010260678.1| PREDICTED: ribonuclease H2 subunit B isoform... 238 4e-60
ref|XP_010260675.1| PREDICTED: ribonuclease H2 subunit B isoform... 238 4e-60
ref|XP_009379965.1| PREDICTED: uncharacterized protein LOC103968... 232 2e-58
emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera] 232 2e-58
ref|XP_011623707.1| PREDICTED: ribonuclease H2 subunit B [Ambore... 230 6e-58
ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis ... 230 6e-58
ref|XP_002517803.1| conserved hypothetical protein [Ricinus comm... 230 8e-58
gb|KGN62854.1| hypothetical protein Csa_2G377900 [Cucumis sativus] 226 9e-57
ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B isoform... 226 9e-57
ref|XP_012084296.1| PREDICTED: ribonuclease H2 subunit B [Jatrop... 226 2e-56
ref|XP_009624241.1| PREDICTED: ribonuclease H2 subunit B [Nicoti... 224 3e-56
ref|XP_006448513.1| hypothetical protein CICLE_v10016172mg [Citr... 224 3e-56
ref|XP_011099836.1| PREDICTED: ribonuclease H2 subunit B [Sesamu... 224 4e-56
ref|XP_006348740.1| PREDICTED: ribonuclease H2 subunit B-like is... 224 4e-56
ref|XP_006348739.1| PREDICTED: ribonuclease H2 subunit B-like is... 224 4e-56
ref|XP_006468662.1| PREDICTED: ribonuclease H2 subunit B-like [C... 223 1e-55
ref|XP_010929863.1| PREDICTED: ribonuclease H2 subunit B isoform... 221 4e-55
ref|XP_010929856.1| PREDICTED: ribonuclease H2 subunit B isoform... 221 4e-55
ref|XP_008219972.1| PREDICTED: ribonuclease H2 subunit B [Prunus... 221 5e-55
ref|XP_010320909.1| PREDICTED: ribonuclease H2 subunit B isoform... 220 6e-55
>ref|XP_010260678.1| PREDICTED: ribonuclease H2 subunit B isoform X2 [Nelumbo nucifera]
Length = 279
Score = 238 bits (606), Expect = 4e-60
Identities = 112/166 (67%), Positives = 133/166 (80%)
Frame = -3
Query: 498 MASSDCITETRLLIAHSSILTNTTHTELANMEGCLFSLRHPKSGSTTCYAFINGSLQELH 319
MA D + ETR++IA T + N EGC LRHPKSG TT Y FINGS+QE H
Sbjct: 1 MAWWDNVAETRIVIAPEPGSTISAR----NGEGCFLFLRHPKSGDTTSYFFINGSIQEFH 56
Query: 318 WFKQLYGSWFLGDYVCEDGGLYAATPVDPIFLLLPIFEDARMKKGNDRGKFRQLDEIIYI 139
WFKQ YGSWF+GDYVCEDG LY ATP+DPIF+LLPIFE+ARMKK ND+GKFR LDEI+++
Sbjct: 57 WFKQSYGSWFIGDYVCEDGCLYTATPIDPIFILLPIFEEARMKKANDQGKFRPLDEILFV 116
Query: 138 EGFPGYQNLLPIAESSMQVVCEVKEIGSSKFFRLDDSKVLAWLCCK 1
G+PGYQ+LL +AE SM++VCE+KEIGS+KF+RLDDSKVLAWLC K
Sbjct: 117 SGYPGYQHLLCVAEDSMRIVCEIKEIGSTKFYRLDDSKVLAWLCHK 162
>ref|XP_010260675.1| PREDICTED: ribonuclease H2 subunit B isoform X1 [Nelumbo nucifera]
gi|720014971|ref|XP_010260676.1| PREDICTED: ribonuclease
H2 subunit B isoform X1 [Nelumbo nucifera]
gi|720014974|ref|XP_010260677.1| PREDICTED: ribonuclease
H2 subunit B isoform X1 [Nelumbo nucifera]
Length = 281
Score = 238 bits (606), Expect = 4e-60
Identities = 112/166 (67%), Positives = 133/166 (80%)
Frame = -3
Query: 498 MASSDCITETRLLIAHSSILTNTTHTELANMEGCLFSLRHPKSGSTTCYAFINGSLQELH 319
MA D + ETR++IA T + N EGC LRHPKSG TT Y FINGS+QE H
Sbjct: 1 MAWWDNVAETRIVIAPEPGSTISAR----NGEGCFLFLRHPKSGDTTSYFFINGSIQEFH 56
Query: 318 WFKQLYGSWFLGDYVCEDGGLYAATPVDPIFLLLPIFEDARMKKGNDRGKFRQLDEIIYI 139
WFKQ YGSWF+GDYVCEDG LY ATP+DPIF+LLPIFE+ARMKK ND+GKFR LDEI+++
Sbjct: 57 WFKQSYGSWFIGDYVCEDGCLYTATPIDPIFILLPIFEEARMKKANDQGKFRPLDEILFV 116
Query: 138 EGFPGYQNLLPIAESSMQVVCEVKEIGSSKFFRLDDSKVLAWLCCK 1
G+PGYQ+LL +AE SM++VCE+KEIGS+KF+RLDDSKVLAWLC K
Sbjct: 117 SGYPGYQHLLCVAEDSMRIVCEIKEIGSTKFYRLDDSKVLAWLCHK 162
>ref|XP_009379965.1| PREDICTED: uncharacterized protein LOC103968459 [Musa acuminata
subsp. malaccensis]
Length = 289
Score = 232 bits (592), Expect = 2e-58
Identities = 109/168 (64%), Positives = 131/168 (77%), Gaps = 2/168 (1%)
Frame = -3
Query: 498 MASSDCITETRLLIAHSSILTNTTHTEL--ANMEGCLFSLRHPKSGSTTCYAFINGSLQE 325
MA + + RLLIA +TN + AN EGCL SLRHP+SG CY G LQE
Sbjct: 1 MAWCEGVEAPRLLIAPLPPITNKGEDIIGNANAEGCLLSLRHPQSGKPACYLLREGYLQE 60
Query: 324 LHWFKQLYGSWFLGDYVCEDGGLYAATPVDPIFLLLPIFEDARMKKGNDRGKFRQLDEII 145
LHWFKQ YGSWFLGDY CEDG LY +TP+DPIF+LLPIFE+ARMKK +D+G FRQLDEI+
Sbjct: 61 LHWFKQSYGSWFLGDYACEDGSLYISTPIDPIFVLLPIFEEARMKKASDQGVFRQLDEIL 120
Query: 144 YIEGFPGYQNLLPIAESSMQVVCEVKEIGSSKFFRLDDSKVLAWLCCK 1
Y++G+PGYQ+L +A+ +M +VCEVKEIGSSKFFRLD+S+VLAWLCCK
Sbjct: 121 YVDGYPGYQHLFSVAKDTMNMVCEVKEIGSSKFFRLDNSRVLAWLCCK 168
>emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]
Length = 277
Score = 232 bits (591), Expect = 2e-58
Identities = 113/166 (68%), Positives = 131/166 (78%)
Frame = -3
Query: 498 MASSDCITETRLLIAHSSILTNTTHTELANMEGCLFSLRHPKSGSTTCYAFINGSLQELH 319
MA S+ + ETRLLIA + N G SLRHPKSG TCY F NG+LQEL+
Sbjct: 1 MAWSEGVEETRLLIAPDV-------NAIGNGLGQFLSLRHPKSGKATCYLFKNGTLQELN 53
Query: 318 WFKQLYGSWFLGDYVCEDGGLYAATPVDPIFLLLPIFEDARMKKGNDRGKFRQLDEIIYI 139
WFKQ YGSWFLGDYVCEDG LY AT VDP+F++LPIFE+ARMKK +D GKFRQLDEI+++
Sbjct: 54 WFKQSYGSWFLGDYVCEDGRLYTATIVDPVFIMLPIFEEARMKKRDDPGKFRQLDEIMFV 113
Query: 138 EGFPGYQNLLPIAESSMQVVCEVKEIGSSKFFRLDDSKVLAWLCCK 1
+PGYQ+L+PIAE+ MQVVCE+KEIGSSKFFRLDDSKVLAWLC K
Sbjct: 114 NSYPGYQHLIPIAENCMQVVCEIKEIGSSKFFRLDDSKVLAWLCYK 159
>ref|XP_011623707.1| PREDICTED: ribonuclease H2 subunit B [Amborella trichopoda]
Length = 279
Score = 230 bits (587), Expect = 6e-58
Identities = 105/167 (62%), Positives = 132/167 (79%), Gaps = 1/167 (0%)
Frame = -3
Query: 498 MASSDCITETRLLIA-HSSILTNTTHTELANMEGCLFSLRHPKSGSTTCYAFINGSLQEL 322
MASS +TRLLIA H I T + EGCL SLRHPKSG +CY F +G LQEL
Sbjct: 1 MASSKGEAQTRLLIAPHLPITTISELHASCKFEGCLLSLRHPKSGKPSCYLFTDGLLQEL 60
Query: 321 HWFKQLYGSWFLGDYVCEDGGLYAATPVDPIFLLLPIFEDARMKKGNDRGKFRQLDEIIY 142
HWFKQ YGSWF+GDY+CEDGG+Y ATPVDP+F+LLP+F +ARMKKG++ GKFRQ+D+I++
Sbjct: 61 HWFKQSYGSWFIGDYICEDGGIYVATPVDPVFILLPLFHEARMKKGDELGKFRQVDDIMF 120
Query: 141 IEGFPGYQNLLPIAESSMQVVCEVKEIGSSKFFRLDDSKVLAWLCCK 1
++G+PGY+ LLP+ +S+Q +CEVKE+GS F RLDDSKV+AWL CK
Sbjct: 121 VDGYPGYRYLLPVVSNSLQAICEVKEVGSEIFCRLDDSKVVAWLHCK 167
>ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis vinifera]
gi|296081827|emb|CBI20832.3| unnamed protein product
[Vitis vinifera]
Length = 277
Score = 230 bits (587), Expect = 6e-58
Identities = 112/166 (67%), Positives = 130/166 (78%)
Frame = -3
Query: 498 MASSDCITETRLLIAHSSILTNTTHTELANMEGCLFSLRHPKSGSTTCYAFINGSLQELH 319
MA S+ + ETRLLIA + N G S RHPKSG TCY F NG+LQEL+
Sbjct: 1 MAWSEGVEETRLLIAPDV-------NAIGNGLGQFLSFRHPKSGKATCYLFKNGTLQELN 53
Query: 318 WFKQLYGSWFLGDYVCEDGGLYAATPVDPIFLLLPIFEDARMKKGNDRGKFRQLDEIIYI 139
WFKQ YGSWFLGDYVCEDG LY AT VDP+F++LPIFE+ARMKK +D GKFRQLDEI+++
Sbjct: 54 WFKQSYGSWFLGDYVCEDGRLYTATIVDPVFIMLPIFEEARMKKRDDPGKFRQLDEIMFV 113
Query: 138 EGFPGYQNLLPIAESSMQVVCEVKEIGSSKFFRLDDSKVLAWLCCK 1
+PGYQ+L+PIAE+ MQVVCE+KEIGSSKFFRLDDSKVLAWLC K
Sbjct: 114 NSYPGYQHLIPIAENCMQVVCEIKEIGSSKFFRLDDSKVLAWLCYK 159
>ref|XP_002517803.1| conserved hypothetical protein [Ricinus communis]
gi|223543075|gb|EEF44610.1| conserved hypothetical
protein [Ricinus communis]
Length = 299
Score = 230 bits (586), Expect = 8e-58
Identities = 111/158 (70%), Positives = 129/158 (81%)
Frame = -3
Query: 474 ETRLLIAHSSILTNTTHTELANMEGCLFSLRHPKSGSTTCYAFINGSLQELHWFKQLYGS 295
ETRLLIAHS+ A+ G L SL+HPKSG TTCY N LQELHWFKQ Y S
Sbjct: 34 ETRLLIAHSAN---------ADGVGRLLSLQHPKSGKTTCYLLNNRMLQELHWFKQSYTS 84
Query: 294 WFLGDYVCEDGGLYAATPVDPIFLLLPIFEDARMKKGNDRGKFRQLDEIIYIEGFPGYQN 115
WFLGDYVC+DG LY+ATPVDP+F+LLPIFE+ARM+KG+D GKFRQLDEI++I G+PGY+
Sbjct: 85 WFLGDYVCQDGCLYSATPVDPVFILLPIFEEARMRKGDDPGKFRQLDEILFINGYPGYRY 144
Query: 114 LLPIAESSMQVVCEVKEIGSSKFFRLDDSKVLAWLCCK 1
L+PIAE+ MQVVCE+KEIGSSKFFRL+DSKV AWL CK
Sbjct: 145 LMPIAENCMQVVCEIKEIGSSKFFRLNDSKVFAWLLCK 182
>gb|KGN62854.1| hypothetical protein Csa_2G377900 [Cucumis sativus]
Length = 363
Score = 226 bits (577), Expect = 9e-57
Identities = 106/163 (65%), Positives = 129/163 (79%)
Frame = -3
Query: 498 MASSDCITETRLLIAHSSILTNTTHTELANMEGCLFSLRHPKSGSTTCYAFINGSLQELH 319
MA + + ETR+LIA H N+ GC SLRHPKSG+ TC+ ++N L+E+H
Sbjct: 83 MAWCEGVEETRILIAPD-------HGVKENVTGCFLSLRHPKSGNPTCFLYVNEMLEEIH 135
Query: 318 WFKQLYGSWFLGDYVCEDGGLYAATPVDPIFLLLPIFEDARMKKGNDRGKFRQLDEIIYI 139
WFKQ Y SWFLGDYV EDG LY+ATPVDP+F+ LPIFE+ARMKKG+D GKFRQLD+I++I
Sbjct: 136 WFKQSYSSWFLGDYVAEDGRLYSATPVDPVFIFLPIFEEARMKKGDDLGKFRQLDDIMFI 195
Query: 138 EGFPGYQNLLPIAESSMQVVCEVKEIGSSKFFRLDDSKVLAWL 10
G+PGY +LLP+AE MQVVCEVKE+GSS+FFRLDDSKVLAWL
Sbjct: 196 NGYPGYLHLLPLAEKFMQVVCEVKEVGSSRFFRLDDSKVLAWL 238
>ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B isoform X1 [Cucumis sativus]
Length = 281
Score = 226 bits (577), Expect = 9e-57
Identities = 106/163 (65%), Positives = 129/163 (79%)
Frame = -3
Query: 498 MASSDCITETRLLIAHSSILTNTTHTELANMEGCLFSLRHPKSGSTTCYAFINGSLQELH 319
MA + + ETR+LIA H N+ GC SLRHPKSG+ TC+ ++N L+E+H
Sbjct: 1 MAWCEGVEETRILIAPD-------HGVKENVTGCFLSLRHPKSGNPTCFLYVNEMLEEIH 53
Query: 318 WFKQLYGSWFLGDYVCEDGGLYAATPVDPIFLLLPIFEDARMKKGNDRGKFRQLDEIIYI 139
WFKQ Y SWFLGDYV EDG LY+ATPVDP+F+ LPIFE+ARMKKG+D GKFRQLD+I++I
Sbjct: 54 WFKQSYSSWFLGDYVAEDGRLYSATPVDPVFIFLPIFEEARMKKGDDLGKFRQLDDIMFI 113
Query: 138 EGFPGYQNLLPIAESSMQVVCEVKEIGSSKFFRLDDSKVLAWL 10
G+PGY +LLP+AE MQVVCEVKE+GSS+FFRLDDSKVLAWL
Sbjct: 114 NGYPGYLHLLPLAEKFMQVVCEVKEVGSSRFFRLDDSKVLAWL 156
>ref|XP_012084296.1| PREDICTED: ribonuclease H2 subunit B [Jatropha curcas]
gi|802707346|ref|XP_012084297.1| PREDICTED: ribonuclease
H2 subunit B [Jatropha curcas]
gi|643715940|gb|KDP27755.1| hypothetical protein
JCGZ_19784 [Jatropha curcas]
Length = 276
Score = 226 bits (575), Expect = 2e-56
Identities = 110/158 (69%), Positives = 125/158 (79%)
Frame = -3
Query: 474 ETRLLIAHSSILTNTTHTELANMEGCLFSLRHPKSGSTTCYAFINGSLQELHWFKQLYGS 295
ETRLLIA S+ N G L SL+HPKSG TCY +NG L ELHWFKQ Y S
Sbjct: 9 ETRLLIAPSAT---------GNGLGHLLSLQHPKSGKPTCYLLVNGVLHELHWFKQSYTS 59
Query: 294 WFLGDYVCEDGGLYAATPVDPIFLLLPIFEDARMKKGNDRGKFRQLDEIIYIEGFPGYQN 115
WFLGDYVCEDG LY+ATP+DP+F+ LPIFE+ARMKK +D GKFRQLDEII+I G+PGY +
Sbjct: 60 WFLGDYVCEDGCLYSATPIDPVFIFLPIFEEARMKKEDDPGKFRQLDEIIFINGYPGYCH 119
Query: 114 LLPIAESSMQVVCEVKEIGSSKFFRLDDSKVLAWLCCK 1
L+ IAE+ MQVVCE+KEIGSSKFFRLDDSKVLAWL CK
Sbjct: 120 LMSIAENCMQVVCEIKEIGSSKFFRLDDSKVLAWLSCK 157
>ref|XP_009624241.1| PREDICTED: ribonuclease H2 subunit B [Nicotiana tomentosiformis]
Length = 335
Score = 224 bits (572), Expect = 3e-56
Identities = 114/192 (59%), Positives = 139/192 (72%)
Frame = -3
Query: 576 HPFSSITQSLKILFRLGFSCYNLISPMASSDCITETRLLIAHSSILTNTTHTELANMEGC 397
HP S T S GF+C S MA + I E R+LIA ++ N G
Sbjct: 35 HPLVSFTPSTP----RGFACVRKGS-MAWWEGIDEARVLIAPEP-------SKDGNKVGQ 82
Query: 396 LFSLRHPKSGSTTCYAFINGSLQELHWFKQLYGSWFLGDYVCEDGGLYAATPVDPIFLLL 217
L SL+HPKSG+ TCY ++GSLQELHWFKQ YGSWFLGDYVCEDG LY ATPVDP+F+LL
Sbjct: 83 LLSLQHPKSGNATCYVCVDGSLQELHWFKQSYGSWFLGDYVCEDGRLYTATPVDPVFVLL 142
Query: 216 PIFEDARMKKGNDRGKFRQLDEIIYIEGFPGYQNLLPIAESSMQVVCEVKEIGSSKFFRL 37
PIFE+ARMKK +D+GKFRQLDEI Y+ G+PGYQ+L +AE+ MQVVC+VK+IG ++F+RL
Sbjct: 143 PIFEEARMKKNDDQGKFRQLDEITYVVGYPGYQHLSSVAENCMQVVCDVKDIGKTQFYRL 202
Query: 36 DDSKVLAWLCCK 1
+D KVL WLC K
Sbjct: 203 NDEKVLKWLCFK 214
>ref|XP_006448513.1| hypothetical protein CICLE_v10016172mg [Citrus clementina]
gi|557551124|gb|ESR61753.1| hypothetical protein
CICLE_v10016172mg [Citrus clementina]
Length = 283
Score = 224 bits (572), Expect = 3e-56
Identities = 110/166 (66%), Positives = 129/166 (77%)
Frame = -3
Query: 498 MASSDCITETRLLIAHSSILTNTTHTELANMEGCLFSLRHPKSGSTTCYAFINGSLQELH 319
MA + TRLLIA S T ++ G L SL HPKSG TCY ++G LQEL+
Sbjct: 1 MAWCKDVEGTRLLIAPDSSATGSSG-------GRLLSLCHPKSGQKTCYLLVDGVLQELN 53
Query: 318 WFKQLYGSWFLGDYVCEDGGLYAATPVDPIFLLLPIFEDARMKKGNDRGKFRQLDEIIYI 139
W KQ Y SWFLG+YVCEDG +YAATP+DP+F++LPIFE+AR+KKG D GKFRQLDEII+I
Sbjct: 54 WLKQSYKSWFLGNYVCEDGSIYAATPIDPVFIMLPIFEEARLKKGEDPGKFRQLDEIIFI 113
Query: 138 EGFPGYQNLLPIAESSMQVVCEVKEIGSSKFFRLDDSKVLAWLCCK 1
+G+PGYQ LLP+AE+ MQVVCEVKEIGSSKFFRLDD KVLAWL CK
Sbjct: 114 DGYPGYQYLLPLAENCMQVVCEVKEIGSSKFFRLDDLKVLAWLYCK 159
>ref|XP_011099836.1| PREDICTED: ribonuclease H2 subunit B [Sesamum indicum]
Length = 278
Score = 224 bits (571), Expect = 4e-56
Identities = 108/166 (65%), Positives = 127/166 (76%)
Frame = -3
Query: 498 MASSDCITETRLLIAHSSILTNTTHTELANMEGCLFSLRHPKSGSTTCYAFINGSLQELH 319
MA + ETR+LIA + L G SLRHP++G+TTCY + +G LQELH
Sbjct: 1 MAWREGANETRVLIAQDL-------STLGKHLGKFLSLRHPRTGNTTCYLYSDGGLQELH 53
Query: 318 WFKQLYGSWFLGDYVCEDGGLYAATPVDPIFLLLPIFEDARMKKGNDRGKFRQLDEIIYI 139
W Q YGSWFLGDYVCEDG LY ATPVDP+F+LLPIFE+ARMKKGND GKFRQLDEIIYI
Sbjct: 54 WLNQSYGSWFLGDYVCEDGRLYTATPVDPVFILLPIFEEARMKKGNDPGKFRQLDEIIYI 113
Query: 138 EGFPGYQNLLPIAESSMQVVCEVKEIGSSKFFRLDDSKVLAWLCCK 1
G+PGYQ+L IAE +MQVVC++KE+GS+KFFRL+D KVL WLC K
Sbjct: 114 HGYPGYQSLSSIAEKTMQVVCDLKEVGSTKFFRLNDLKVLKWLCYK 159
>ref|XP_006348740.1| PREDICTED: ribonuclease H2 subunit B-like isoform X2 [Solanum
tuberosum]
Length = 332
Score = 224 bits (571), Expect = 4e-56
Identities = 110/176 (62%), Positives = 132/176 (75%)
Frame = -3
Query: 528 GFSCYNLISPMASSDCITETRLLIAHSSILTNTTHTELANMEGCLFSLRHPKSGSTTCYA 349
GFSC +S MA + + E R+LIA +L SLRHPKSG+ TCY
Sbjct: 46 GFSCVRKVS-MAWWEGLDEARVLIAKEPSKDGDKVEQL-------LSLRHPKSGNATCYL 97
Query: 348 FINGSLQELHWFKQLYGSWFLGDYVCEDGGLYAATPVDPIFLLLPIFEDARMKKGNDRGK 169
++GSLQELHWFKQ YGSWFLGDYVCEDG LY ATPVDP+F+LLPIFE+ARMKK +D GK
Sbjct: 98 CVDGSLQELHWFKQSYGSWFLGDYVCEDGRLYTATPVDPVFVLLPIFEEARMKKNDDPGK 157
Query: 168 FRQLDEIIYIEGFPGYQNLLPIAESSMQVVCEVKEIGSSKFFRLDDSKVLAWLCCK 1
FRQ+DEIIY+ G+PGYQ+L IAE+ MQVVC+VK++G +KFFRL+D KVL WLC K
Sbjct: 158 FRQVDEIIYVVGYPGYQHLSSIAENCMQVVCDVKDVGMTKFFRLNDEKVLKWLCLK 213
>ref|XP_006348739.1| PREDICTED: ribonuclease H2 subunit B-like isoform X1 [Solanum
tuberosum]
Length = 333
Score = 224 bits (571), Expect = 4e-56
Identities = 110/176 (62%), Positives = 132/176 (75%)
Frame = -3
Query: 528 GFSCYNLISPMASSDCITETRLLIAHSSILTNTTHTELANMEGCLFSLRHPKSGSTTCYA 349
GFSC +S MA + + E R+LIA +L SLRHPKSG+ TCY
Sbjct: 46 GFSCVRKVS-MAWWEGLDEARVLIAKEPSKDGDKVEQL-------LSLRHPKSGNATCYL 97
Query: 348 FINGSLQELHWFKQLYGSWFLGDYVCEDGGLYAATPVDPIFLLLPIFEDARMKKGNDRGK 169
++GSLQELHWFKQ YGSWFLGDYVCEDG LY ATPVDP+F+LLPIFE+ARMKK +D GK
Sbjct: 98 CVDGSLQELHWFKQSYGSWFLGDYVCEDGRLYTATPVDPVFVLLPIFEEARMKKNDDPGK 157
Query: 168 FRQLDEIIYIEGFPGYQNLLPIAESSMQVVCEVKEIGSSKFFRLDDSKVLAWLCCK 1
FRQ+DEIIY+ G+PGYQ+L IAE+ MQVVC+VK++G +KFFRL+D KVL WLC K
Sbjct: 158 FRQVDEIIYVVGYPGYQHLSSIAENCMQVVCDVKDVGMTKFFRLNDEKVLKWLCLK 213
>ref|XP_006468662.1| PREDICTED: ribonuclease H2 subunit B-like [Citrus sinensis]
Length = 283
Score = 223 bits (568), Expect = 1e-55
Identities = 108/166 (65%), Positives = 129/166 (77%)
Frame = -3
Query: 498 MASSDCITETRLLIAHSSILTNTTHTELANMEGCLFSLRHPKSGSTTCYAFINGSLQELH 319
MA + TRLLIA S T ++ G L SL HPKSG TCY ++G LQEL+
Sbjct: 1 MAWCKDVEGTRLLIAPDSSATGSSG-------GRLLSLCHPKSGQKTCYLLVDGVLQELN 53
Query: 318 WFKQLYGSWFLGDYVCEDGGLYAATPVDPIFLLLPIFEDARMKKGNDRGKFRQLDEIIYI 139
W KQ Y SWFLG+YVCEDG +YAATP+DP+F++LPIFE+AR+KKG D GKFRQLDEII+I
Sbjct: 54 WLKQSYKSWFLGNYVCEDGSIYAATPIDPVFIMLPIFEEARLKKGEDPGKFRQLDEIIFI 113
Query: 138 EGFPGYQNLLPIAESSMQVVCEVKEIGSSKFFRLDDSKVLAWLCCK 1
+G+PGYQ +LP+AE+ MQVVCEVKEIGSSKFFRLDD KV+AWL CK
Sbjct: 114 DGYPGYQYILPLAENCMQVVCEVKEIGSSKFFRLDDLKVIAWLYCK 159
>ref|XP_010929863.1| PREDICTED: ribonuclease H2 subunit B isoform X3 [Elaeis guineensis]
Length = 254
Score = 221 bits (563), Expect = 4e-55
Identities = 108/165 (65%), Positives = 127/165 (76%), Gaps = 2/165 (1%)
Frame = -3
Query: 498 MASSDCITETRLLIAHSSILTNTTHTELANMEGCLFSLRHPKSGSTTCYAFINGSLQELH 319
MA D + E RLLI+ T N EGC+ SLRHPKSG T Y F G LQELH
Sbjct: 6 MAWCDGLEEPRLLISPQKDTTTNV-----NAEGCILSLRHPKSGKPTNYVFSAGKLQELH 60
Query: 318 WFKQLYGSWFLGDYVCEDGGLYAATPVDPIFLLLPIFEDARM--KKGNDRGKFRQLDEII 145
WFKQ GSWFLGDYVCEDG LY ATP+DPIF+LLP+FE ARM +K ND+G FRQLDEI+
Sbjct: 61 WFKQSCGSWFLGDYVCEDGSLYIATPIDPIFILLPVFEAARMTIQKRNDQGMFRQLDEIL 120
Query: 144 YIEGFPGYQNLLPIAESSMQVVCEVKEIGSSKFFRLDDSKVLAWL 10
Y++G+PGYQ+L+ +AE SMQ+VCEVKEIGSSKFFRL+DSK++AWL
Sbjct: 121 YVDGYPGYQHLMSVAEDSMQLVCEVKEIGSSKFFRLNDSKLIAWL 165
>ref|XP_010929856.1| PREDICTED: ribonuclease H2 subunit B isoform X1 [Elaeis guineensis]
gi|743813887|ref|XP_010929857.1| PREDICTED: ribonuclease
H2 subunit B isoform X1 [Elaeis guineensis]
gi|743813889|ref|XP_010929858.1| PREDICTED: ribonuclease
H2 subunit B isoform X1 [Elaeis guineensis]
gi|743813892|ref|XP_010929859.1| PREDICTED: ribonuclease
H2 subunit B isoform X1 [Elaeis guineensis]
gi|743813895|ref|XP_010929860.1| PREDICTED: ribonuclease
H2 subunit B isoform X1 [Elaeis guineensis]
gi|743813899|ref|XP_010929861.1| PREDICTED: ribonuclease
H2 subunit B isoform X1 [Elaeis guineensis]
Length = 288
Score = 221 bits (563), Expect = 4e-55
Identities = 108/165 (65%), Positives = 127/165 (76%), Gaps = 2/165 (1%)
Frame = -3
Query: 498 MASSDCITETRLLIAHSSILTNTTHTELANMEGCLFSLRHPKSGSTTCYAFINGSLQELH 319
MA D + E RLLI+ T N EGC+ SLRHPKSG T Y F G LQELH
Sbjct: 6 MAWCDGLEEPRLLISPQKDTTTNV-----NAEGCILSLRHPKSGKPTNYVFSAGKLQELH 60
Query: 318 WFKQLYGSWFLGDYVCEDGGLYAATPVDPIFLLLPIFEDARM--KKGNDRGKFRQLDEII 145
WFKQ GSWFLGDYVCEDG LY ATP+DPIF+LLP+FE ARM +K ND+G FRQLDEI+
Sbjct: 61 WFKQSCGSWFLGDYVCEDGSLYIATPIDPIFILLPVFEAARMTIQKRNDQGMFRQLDEIL 120
Query: 144 YIEGFPGYQNLLPIAESSMQVVCEVKEIGSSKFFRLDDSKVLAWL 10
Y++G+PGYQ+L+ +AE SMQ+VCEVKEIGSSKFFRL+DSK++AWL
Sbjct: 121 YVDGYPGYQHLMSVAEDSMQLVCEVKEIGSSKFFRLNDSKLIAWL 165
>ref|XP_008219972.1| PREDICTED: ribonuclease H2 subunit B [Prunus mume]
Length = 274
Score = 221 bits (562), Expect = 5e-55
Identities = 110/163 (67%), Positives = 126/163 (77%)
Frame = -3
Query: 498 MASSDCITETRLLIAHSSILTNTTHTELANMEGCLFSLRHPKSGSTTCYAFINGSLQELH 319
MA + E RLLIA + E N G L SLRHPKSG++ C +NG LQEL
Sbjct: 1 MAWWEGFDEIRLLIAADT-------AETGNDVGQLLSLRHPKSGNSMCCLLVNGVLQELS 53
Query: 318 WFKQLYGSWFLGDYVCEDGGLYAATPVDPIFLLLPIFEDARMKKGNDRGKFRQLDEIIYI 139
WFKQ Y SWFLGDYV EDGGLY ATPVDP+F+LLPIFE+ARMKKG+D GKFR +DEII++
Sbjct: 54 WFKQSYTSWFLGDYVAEDGGLYTATPVDPVFILLPIFEEARMKKGDDLGKFRLVDEIIFV 113
Query: 138 EGFPGYQNLLPIAESSMQVVCEVKEIGSSKFFRLDDSKVLAWL 10
EG+PGYQ LL IAE+ MQVVCE+KEIGSSKFFRLDDSKVLAW+
Sbjct: 114 EGYPGYQKLLSIAENCMQVVCEIKEIGSSKFFRLDDSKVLAWM 156
>ref|XP_010320909.1| PREDICTED: ribonuclease H2 subunit B isoform X2 [Solanum
lycopersicum]
Length = 333
Score = 220 bits (561), Expect = 6e-55
Identities = 109/176 (61%), Positives = 132/176 (75%)
Frame = -3
Query: 528 GFSCYNLISPMASSDCITETRLLIAHSSILTNTTHTELANMEGCLFSLRHPKSGSTTCYA 349
GFSC S MA + + E R+LIA ++ N L SLRHPKSG+ TCY
Sbjct: 45 GFSCVRK-SSMAWWEGLDEARVLIAKEP-------SKDGNKVEQLLSLRHPKSGNATCYL 96
Query: 348 FINGSLQELHWFKQLYGSWFLGDYVCEDGGLYAATPVDPIFLLLPIFEDARMKKGNDRGK 169
++ SLQELHWFKQ YGSWFLGDYVCEDG LY ATPVDP+F+LLPIF++ARMKK +D GK
Sbjct: 97 CVDESLQELHWFKQSYGSWFLGDYVCEDGRLYTATPVDPVFVLLPIFDEARMKKNDDPGK 156
Query: 168 FRQLDEIIYIEGFPGYQNLLPIAESSMQVVCEVKEIGSSKFFRLDDSKVLAWLCCK 1
FRQ+DEIIY+ G+PGYQ+L IAE+ MQVVC+VK++G +KFFRL+D KVL WLC K
Sbjct: 157 FRQVDEIIYVVGYPGYQHLSSIAENCMQVVCDVKDVGMTKFFRLNDEKVLKWLCLK 212