BLASTX nr result

ID: Cinnamomum23_contig00018324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00018324
         (245 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KJB09727.1| hypothetical protein B456_001G160300 [Gossypium r...    84   4e-14
gb|AIG89907.1| hypothetical protein (mitochondrion) [Capsicum an...    65   2e-08

>gb|KJB09727.1| hypothetical protein B456_001G160300 [Gossypium raimondii]
          Length = 171

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 47/79 (59%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
 Frame = -2

Query: 235 GMLTVALYLKQCSSSLMIAYGG--DHRPHGLLPHPVSLTRRGMPRIIPAFHRHMIRAHDS 62
           G L  ALYLKQC+ +L  AYGG   +  H  L  PVSLTR G PRIIP+FHR  I   D 
Sbjct: 6   GALFTALYLKQCAVTLQQAYGGITPYDIHTKLSVPVSLTRSGYPRIIPSFHRQQIYKRDD 65

Query: 61  KADLLVKWYLSLFSLYRII 5
           KAD+LVK YLS FSL R I
Sbjct: 66  KADMLVKLYLSFFSLSRAI 84


>gb|AIG89907.1| hypothetical protein (mitochondrion) [Capsicum annuum]
          Length = 100

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 35/73 (47%), Positives = 44/73 (60%)
 Frame = -2

Query: 235 GMLTVALYLKQCSSSLMIAYGGDHRPHGLLPHPVSLTRRGMPRIIPAFHRHMIRAHDSKA 56
           G L  ALYLK+C+ SL   Y G +  +  +  PVSLTR G+P+IIPA  R  +RA     
Sbjct: 26  GFLYTALYLKECTVSLQRYYAGCYSKNDTMSVPVSLTRCGIPKIIPAVLRKHVRAKSDHG 85

Query: 55  DLLVKWYLSLFSL 17
           D LV+ YLS F L
Sbjct: 86  DYLVRIYLSWFGL 98


Top