BLASTX nr result
ID: Cinnamomum23_contig00018101
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00018101
(420 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011397368.1| Chlorophyll a-b binding protein of LHCII typ... 84 4e-14
ref|XP_011398059.1| Chlorophyll a-b binding protein of LHCII typ... 82 1e-13
ref|XP_005648382.1| hypothetical protein COCSUDRAFT_28488 [Cocco... 80 4e-13
ref|XP_005647618.1| putative chlorophyll a/b-binding protein, ch... 79 9e-13
ref|XP_005651417.1| chlorophyll a/b-binding protein [Coccomyxa s... 78 2e-12
ref|XP_005650981.1| chlorophyll a/b-binding protein [Coccomyxa s... 78 2e-12
ref|XP_010275544.1| PREDICTED: chlorophyll a-b binding protein o... 77 6e-12
ref|XP_002948016.1| hypothetical protein VOLCADRAFT_79865 [Volvo... 77 6e-12
ref|XP_002951894.1| hypothetical protein VOLCADRAFT_81675 [Volvo... 77 6e-12
ref|XP_002957491.1| hypothetical protein VOLCADRAFT_84135 [Volvo... 77 6e-12
ref|XP_002958596.1| hypothetical protein VOLCADRAFT_84524 [Volvo... 77 6e-12
ref|XP_002958757.1| hypothetical protein VOLCADRAFT_108301 [Volv... 77 6e-12
ref|XP_002958755.1| hypothetical protein VOLCADRAFT_69853 [Volvo... 77 6e-12
ref|XP_002958754.1| hypothetical protein VOLCADRAFT_69878 [Volvo... 77 6e-12
ref|XP_002958751.1| hypothetical protein VOLCADRAFT_84624 [Volvo... 77 6e-12
ref|XP_002959561.1| hypothetical protein VOLCADRAFT_78398 [Volvo... 77 6e-12
gb|ABN46977.1| chlorophyll a/b-binding protein [Nelumbo nucifera] 77 6e-12
gb|ABM74386.1| major light-harvesting chlorophyll a/b protein 3 ... 76 8e-12
ref|XP_005651359.1| major light-harvesting complex II protein m1... 75 1e-11
sp|P22686.1|CB2_CHLMO RecName: Full=Chlorophyll a-b binding prot... 75 2e-11
>ref|XP_011397368.1| Chlorophyll a-b binding protein of LHCII type I, chloroplastic
[Auxenochlorella protothecoides]
gi|675352040|gb|KFM24480.1| Chlorophyll a-b binding
protein of LHCII type I, chloroplastic [Auxenochlorella
protothecoides]
Length = 250
Score = 84.0 bits (206), Expect = 4e-14
Identities = 40/49 (81%), Positives = 45/49 (91%)
Frame = -1
Query: 420 GRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDP 274
GRLAMFANFGFFVQAIVTGKGP++NL+DHLADP+ NNGFA+ ATKF P
Sbjct: 204 GRLAMFANFGFFVQAIVTGKGPLENLSDHLADPWTNNGFAA--ATKFTP 250
>ref|XP_011398059.1| Chlorophyll a-b binding protein of LHCII type I, chloroplastic
[Auxenochlorella protothecoides]
gi|675352728|gb|KFM25168.1| Chlorophyll a-b binding
protein of LHCII type I, chloroplastic [Auxenochlorella
protothecoides]
Length = 252
Score = 82.0 bits (201), Expect = 1e-13
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = -1
Query: 420 GRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDPA 271
GRLAMFANFGFFVQAIVTGKGP+ NL+DHLADP+ NNGFA+ AT F P+
Sbjct: 204 GRLAMFANFGFFVQAIVTGKGPLQNLSDHLADPWNNNGFAA--ATNFTPS 251
>ref|XP_005648382.1| hypothetical protein COCSUDRAFT_28488 [Coccomyxa subellipsoidea
C-169] gi|384250359|gb|EIE23838.1| hypothetical protein
COCSUDRAFT_28488 [Coccomyxa subellipsoidea C-169]
Length = 275
Score = 80.5 bits (197), Expect = 4e-13
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = -1
Query: 420 GRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDP 274
GRLAMF+NFGFFVQAIVTGKGPI NLNDHLA+P NNGFA+ ATKF P
Sbjct: 229 GRLAMFSNFGFFVQAIVTGKGPIANLNDHLANPTVNNGFAA--ATKFTP 275
>ref|XP_005647618.1| putative chlorophyll a/b-binding protein, chloroplast precursor
[Coccomyxa subellipsoidea C-169]
gi|384249593|gb|EIE23074.1| putative chlorophyll
a/b-binding protein, chloroplast precursor [Coccomyxa
subellipsoidea C-169]
Length = 210
Score = 79.3 bits (194), Expect = 9e-13
Identities = 38/49 (77%), Positives = 43/49 (87%)
Frame = -1
Query: 420 GRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDP 274
GRLAMF+ FGFFVQAIVTGKGP++NLNDHLA P+ NNGFA+ ATKF P
Sbjct: 164 GRLAMFSMFGFFVQAIVTGKGPLENLNDHLASPYANNGFAA--ATKFVP 210
>ref|XP_005651417.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
gi|384253398|gb|EIE26873.1| chlorophyll a/b-binding
protein [Coccomyxa subellipsoidea C-169]
Length = 250
Score = 78.2 bits (191), Expect = 2e-12
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = -1
Query: 420 GRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDP 274
GRLAMF+ FGFFVQAIVTGKGPI+NL+DHLADP NNGFA+ ATKF P
Sbjct: 204 GRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPGVNNGFAA--ATKFAP 250
>ref|XP_005650981.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
gi|384252962|gb|EIE26437.1| chlorophyll a/b-binding
protein [Coccomyxa subellipsoidea C-169]
Length = 245
Score = 78.2 bits (191), Expect = 2e-12
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = -1
Query: 420 GRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDP 274
GRLAMF+ FGFFVQAIVTGKGPI+NL+DHLADP NNGFA+ ATKF P
Sbjct: 199 GRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPGVNNGFAA--ATKFAP 245
>ref|XP_010275544.1| PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like
[Nelumbo nucifera]
Length = 271
Score = 76.6 bits (187), Expect = 6e-12
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -1
Query: 420 GRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDPAS 268
GRLAMFA GF+VQAIVTGKGP++NL DHLADPFKNN +A AT FDP++
Sbjct: 222 GRLAMFAMLGFYVQAIVTGKGPLENLYDHLADPFKNNAWA--FATAFDPSN 270
>ref|XP_002948016.1| hypothetical protein VOLCADRAFT_79865 [Volvox carteri f.
nagariensis] gi|300266818|gb|EFJ51004.1| hypothetical
protein VOLCADRAFT_79865 [Volvox carteri f. nagariensis]
Length = 254
Score = 76.6 bits (187), Expect = 6e-12
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -1
Query: 420 GRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDPAS 268
GRLAMF+ FGFFVQAIVTGKGPI+NLNDHLA+P NN FA ATKF P++
Sbjct: 206 GRLAMFSMFGFFVQAIVTGKGPIENLNDHLANPAVNNAFA--FATKFTPSA 254
>ref|XP_002951894.1| hypothetical protein VOLCADRAFT_81675 [Volvox carteri f.
nagariensis] gi|300262795|gb|EFJ46999.1| hypothetical
protein VOLCADRAFT_81675 [Volvox carteri f. nagariensis]
Length = 255
Score = 76.6 bits (187), Expect = 6e-12
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -1
Query: 420 GRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDPAS 268
GRLAMF+ FGFFVQAIVTGKGPI+NLNDHLA+P NN FA ATKF P++
Sbjct: 207 GRLAMFSMFGFFVQAIVTGKGPIENLNDHLANPAVNNAFA--FATKFTPSA 255
>ref|XP_002957491.1| hypothetical protein VOLCADRAFT_84135 [Volvox carteri f.
nagariensis] gi|300257133|gb|EFJ41385.1| hypothetical
protein VOLCADRAFT_84135 [Volvox carteri f. nagariensis]
Length = 254
Score = 76.6 bits (187), Expect = 6e-12
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -1
Query: 420 GRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDPAS 268
GRLAMF+ FGFFVQAIVTGKGPI+NLNDHLA+P NN FA ATKF P++
Sbjct: 206 GRLAMFSMFGFFVQAIVTGKGPIENLNDHLANPAVNNAFA--FATKFTPSA 254
>ref|XP_002958596.1| hypothetical protein VOLCADRAFT_84524 [Volvox carteri f.
nagariensis] gi|300256057|gb|EFJ40333.1| hypothetical
protein VOLCADRAFT_84524 [Volvox carteri f. nagariensis]
Length = 254
Score = 76.6 bits (187), Expect = 6e-12
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -1
Query: 420 GRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDPAS 268
GRLAMF+ FGFFVQAIVTGKGPI+NLNDHLA+P NN FA ATKF P++
Sbjct: 206 GRLAMFSMFGFFVQAIVTGKGPIENLNDHLANPAVNNAFA--FATKFTPSA 254
>ref|XP_002958757.1| hypothetical protein VOLCADRAFT_108301 [Volvox carteri f.
nagariensis] gi|300255932|gb|EFJ40213.1| hypothetical
protein VOLCADRAFT_108301 [Volvox carteri f.
nagariensis]
Length = 112
Score = 76.6 bits (187), Expect = 6e-12
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -1
Query: 420 GRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDPAS 268
GRLAMF+ FGFFVQAIVTGKGPI+NLNDHLA+P NN FA ATKF P++
Sbjct: 64 GRLAMFSMFGFFVQAIVTGKGPIENLNDHLANPAVNNAFA--FATKFTPSA 112
>ref|XP_002958755.1| hypothetical protein VOLCADRAFT_69853 [Volvox carteri f.
nagariensis] gi|300255930|gb|EFJ40211.1| hypothetical
protein VOLCADRAFT_69853, partial [Volvox carteri f.
nagariensis]
Length = 88
Score = 76.6 bits (187), Expect = 6e-12
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -1
Query: 420 GRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDPAS 268
GRLAMF+ FGFFVQAIVTGKGPI+NLNDHLA+P NN FA ATKF P++
Sbjct: 40 GRLAMFSMFGFFVQAIVTGKGPIENLNDHLANPAVNNAFA--FATKFTPSA 88
>ref|XP_002958754.1| hypothetical protein VOLCADRAFT_69878 [Volvox carteri f.
nagariensis] gi|300255929|gb|EFJ40210.1| hypothetical
protein VOLCADRAFT_69878, partial [Volvox carteri f.
nagariensis]
Length = 55
Score = 76.6 bits (187), Expect = 6e-12
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -1
Query: 420 GRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDPAS 268
GRLAMF+ FGFFVQAIVTGKGPI+NLNDHLA+P NN FA ATKF P++
Sbjct: 7 GRLAMFSMFGFFVQAIVTGKGPIENLNDHLANPAVNNAFA--FATKFTPSA 55
>ref|XP_002958751.1| hypothetical protein VOLCADRAFT_84624 [Volvox carteri f.
nagariensis] gi|302854497|ref|XP_002958756.1|
hypothetical protein VOLCADRAFT_78096 [Volvox carteri f.
nagariensis] gi|300255926|gb|EFJ40207.1| hypothetical
protein VOLCADRAFT_84624 [Volvox carteri f. nagariensis]
gi|300255931|gb|EFJ40212.1| hypothetical protein
VOLCADRAFT_78096 [Volvox carteri f. nagariensis]
Length = 98
Score = 76.6 bits (187), Expect = 6e-12
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -1
Query: 420 GRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDPAS 268
GRLAMF+ FGFFVQAIVTGKGPI+NLNDHLA+P NN FA ATKF P++
Sbjct: 50 GRLAMFSMFGFFVQAIVTGKGPIENLNDHLANPAVNNAFA--FATKFTPSA 98
>ref|XP_002959561.1| hypothetical protein VOLCADRAFT_78398 [Volvox carteri f.
nagariensis] gi|302856626|ref|XP_002959664.1|
hypothetical protein VOLCADRAFT_108699 [Volvox carteri
f. nagariensis] gi|300254677|gb|EFJ39271.1| hypothetical
protein VOLCADRAFT_108699 [Volvox carteri f.
nagariensis] gi|300254888|gb|EFJ39374.1| hypothetical
protein VOLCADRAFT_78398 [Volvox carteri f. nagariensis]
Length = 254
Score = 76.6 bits (187), Expect = 6e-12
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -1
Query: 420 GRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDPAS 268
GRLAMF+ FGFFVQAIVTGKGPI+NLNDHLA+P NN FA ATKF P++
Sbjct: 206 GRLAMFSMFGFFVQAIVTGKGPIENLNDHLANPAVNNAFA--FATKFTPSA 254
>gb|ABN46977.1| chlorophyll a/b-binding protein [Nelumbo nucifera]
Length = 269
Score = 76.6 bits (187), Expect = 6e-12
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -1
Query: 420 GRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDPAS 268
GRLAMFA GF+VQAIVTGKGP++NL DHLADPFKNN +A AT FDP++
Sbjct: 220 GRLAMFAMLGFYVQAIVTGKGPLENLYDHLADPFKNNAWA--FATAFDPSN 268
>gb|ABM74386.1| major light-harvesting chlorophyll a/b protein 3 [Dunaliella
salina] gi|123316062|gb|ABM74387.1| major
light-harvesting chlorophyll a/b protein 3 [Dunaliella
salina]
Length = 261
Score = 76.3 bits (186), Expect = 8e-12
Identities = 40/49 (81%), Positives = 40/49 (81%)
Frame = -1
Query: 420 GRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDP 274
GRLAMFA FGFFVQAIVTGKGPI NL DHLADP NN FAS ATKF P
Sbjct: 213 GRLAMFACFGFFVQAIVTGKGPIQNLEDHLADPGVNNAFAS--ATKFVP 259
>ref|XP_005651359.1| major light-harvesting complex II protein m10 [Coccomyxa
subellipsoidea C-169] gi|384253340|gb|EIE26815.1| major
light-harvesting complex II protein m10 [Coccomyxa
subellipsoidea C-169]
Length = 250
Score = 75.5 bits (184), Expect = 1e-11
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = -1
Query: 420 GRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDPA 271
GRLAMF+ FGFFVQAIVTGKGPI+NL DHLA+P NNGFA+ ATKF P+
Sbjct: 203 GRLAMFSMFGFFVQAIVTGKGPIENLADHLANPSVNNGFAA--ATKFVPS 250
>sp|P22686.1|CB2_CHLMO RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
[Chlamydomonas moewusii] gi|18063|emb|CAA38635.1|
chlorophyll a/b-binding protein [Chlamydomonas moewusii]
Length = 256
Score = 75.1 bits (183), Expect = 2e-11
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = -1
Query: 420 GRLAMFANFGFFVQAIVTGKGPIDNLNDHLADPFKNNGFASVVATKFDPAS 268
GRLAMF+ FGFFVQAIVTGKGPI NL DHLADP NN FA+ ATKF P++
Sbjct: 208 GRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAA--ATKFTPSA 256