BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00017373
         (255 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KIZ04928.1| Chlorophyll a-b binding protein CP29 [Monoraphidi...    97   5e-18
tpg|DAA05897.1| TPA_inf: chloroplast light-harvesting protein CP...    94   3e-17
gb|KIY95232.1| Chlorophyll a-b binding protein CP29 [Monoraphidi...    94   5e-17
gb|ACF24530.1| chlorophyll a/b binding protein CP29 [Gymnochlora...    92   2e-16
ref|XP_002951424.1| chlorophyll a/b-binding protein of photosyst...    92   2e-16
ref|XP_001697193.1| chlorophyll a-b binding protein of photosyst...    90   7e-16
ref|XP_005646225.1| chlorophyll a/b-binding protein CP29 [Coccom...    89   1e-15
ref|XP_005845614.1| hypothetical protein CHLNCDRAFT_56266 [Chlor...    89   1e-15
gb|ABD37915.1| light-harvesting chlorophyll-a/b binding protein ...    87   3e-15
gb|AAP79139.1| chlorophyll a/b-binding protein CP29 [Bigelowiell...    87   3e-15
ref|XP_011400395.1| Chlorophyll a-b binding protein CP29 [Auxeno...    84   5e-14
ref|XP_005646238.1| hypothetical protein COCSUDRAFT_67011 [Cocco...    79   2e-12
gb|ABK26282.1| unknown [Picea sitchensis]                              75   1e-11
gb|ABK25779.1| unknown [Picea sitchensis]                              75   1e-11
gb|ABK21281.1| unknown [Picea sitchensis] gi|116780920|gb|ABK218...    75   1e-11
ref|XP_008373917.1| PREDICTED: chlorophyll a-b binding protein C...    74   3e-11
emb|CEG00441.1| Chlorophyll A-B binding protein, plant [Ostreoco...    74   5e-11
ref|XP_010095100.1| Chlorophyll a-b binding protein [Morus notab...    73   6e-11
ref|XP_009345742.1| PREDICTED: chlorophyll a-b binding protein C...    73   8e-11
ref|XP_004500683.1| PREDICTED: chlorophyll a-b binding protein C...    73   8e-11

>gb|KIZ04928.1| Chlorophyll a-b binding protein CP29 [Monoraphidium neglectum]
          Length = 265

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 43/73 (58%), Positives = 55/73 (75%)
 Frame = -3

Query: 247 SGSPGGSRSYQKFQKDARWLPNTPRPDWLDGTLPGDRGFDPLGLAKPAEYLQYSPDAQNI 68
           S S  G   Y+K+  DA WLPNT RP WLDG+LPGDRGFDPLGL+KP++Y+Q + D  +I
Sbjct: 26  STSRKGGVGYRKYDGDALWLPNTTRPAWLDGSLPGDRGFDPLGLSKPSDYVQIAVDENDI 85

Query: 67  NNAQNFPGKLEGQ 29
           N A+NF G +EG+
Sbjct: 86  NAAKNFKGDVEGK 98


>tpg|DAA05897.1| TPA_inf: chloroplast light-harvesting protein CP29 precursor Lhcb4
           [Acetabularia acetabulum]
          Length = 275

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 44/70 (62%), Positives = 49/70 (70%)
 Frame = -3

Query: 232 GSRSYQKFQKDARWLPNTPRPDWLDGTLPGDRGFDPLGLAKPAEYLQYSPDAQNINNAQN 53
           G   Y+KF  DA WLPNT RP WLDG+LPGDRGFDPLGLAKP EYLQ   D QNIN   N
Sbjct: 40  GGAGYRKFVGDALWLPNTTRPVWLDGSLPGDRGFDPLGLAKPTEYLQVELDEQNINMGVN 99

Query: 52  FPGKLEGQWR 23
             G + G ++
Sbjct: 100 KAGGIIGSYQ 109


>gb|KIY95232.1| Chlorophyll a-b binding protein CP29 [Monoraphidium neglectum]
          Length = 152

 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 42/72 (58%), Positives = 53/72 (73%)
 Frame = -3

Query: 247 SGSPGGSRSYQKFQKDARWLPNTPRPDWLDGTLPGDRGFDPLGLAKPAEYLQYSPDAQNI 68
           + S  G   Y+K+  DA WLPNT RP WLDG+LPGDRGFDPLGL+KPA ++Q + D  +I
Sbjct: 26  TSSRKGGVGYRKYDGDALWLPNTSRPAWLDGSLPGDRGFDPLGLSKPAGFVQIAVDDNDI 85

Query: 67  NNAQNFPGKLEG 32
           N A+NF G +EG
Sbjct: 86  NAAKNFKGDVEG 97


>gb|ACF24530.1| chlorophyll a/b binding protein CP29 [Gymnochlora stellata]
          Length = 290

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 42/65 (64%), Positives = 48/65 (73%)
 Frame = -3

Query: 214 KFQKDARWLPNTPRPDWLDGTLPGDRGFDPLGLAKPAEYLQYSPDAQNINNAQNFPGKLE 35
           K   D  WLPNT RP WLDG+LPGDRGFDPLGL+KPAEYLQY  D  + N A NF GK+ 
Sbjct: 65  KKDSDPLWLPNTVRPTWLDGSLPGDRGFDPLGLSKPAEYLQYDVDQLDQNQAVNFAGKVI 124

Query: 34  GQWRG 20
           G++ G
Sbjct: 125 GKFDG 129


>ref|XP_002951424.1| chlorophyll a/b-binding protein of photosystem II [Volvox carteri
           f. nagariensis] gi|300263399|gb|EFJ47600.1| chlorophyll
           a/b-binding protein of photosystem II [Volvox carteri f.
           nagariensis]
          Length = 317

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 41/71 (57%), Positives = 52/71 (73%)
 Frame = -3

Query: 247 SGSPGGSRSYQKFQKDARWLPNTPRPDWLDGTLPGDRGFDPLGLAKPAEYLQYSPDAQNI 68
           SG+  G   Y+K+Q DA WLPNT RP+WLDG+LPGDRGFDPLGLAKP+E++    D  + 
Sbjct: 72  SGTRSGGVGYRKYQGDALWLPNTVRPEWLDGSLPGDRGFDPLGLAKPSEFVVIGVDENDQ 131

Query: 67  NNAQNFPGKLE 35
           N A+N  G +E
Sbjct: 132 NAAKNNKGSVE 142


>ref|XP_001697193.1| chlorophyll a-b binding protein of photosystem II [Chlamydomonas
           reinhardtii] gi|60391855|sp|Q93WD2.3|CB29_CHLRE RecName:
           Full=Chlorophyll a-b binding protein CP29; AltName:
           Full=Lhcbm4 gi|15430560|dbj|BAB64415.1| light-harvesting
           chlorophyll-a/b binding protein Lhcb4 [Chlamydomonas
           reinhardtii] gi|15430568|dbj|BAB64419.1|
           light-harvesting chlorophyll-a/b binding protein Lhcb4
           [Chlamydomonas reinhardtii] gi|27542567|gb|AAO16494.1|
           CP29-like protein [Chlamydomonas reinhardtii]
           gi|158274667|gb|EDP00448.1| chlorophyll a-b binding
           protein of photosystem II [Chlamydomonas reinhardtii]
          Length = 280

 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 39/71 (54%), Positives = 52/71 (73%)
 Frame = -3

Query: 247 SGSPGGSRSYQKFQKDARWLPNTPRPDWLDGTLPGDRGFDPLGLAKPAEYLQYSPDAQNI 68
           +G+  G   Y+K+Q DA WLPNT RP+WLDG+LPGDRGFDPLGL+KP+E++    D  + 
Sbjct: 35  TGTRSGGVGYRKYQGDALWLPNTTRPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQ 94

Query: 67  NNAQNFPGKLE 35
           N A+N  G +E
Sbjct: 95  NAAKNNKGSVE 105


>ref|XP_005646225.1| chlorophyll a/b-binding protein CP29 [Coccomyxa subellipsoidea
           C-169] gi|384248196|gb|EIE21681.1| chlorophyll
           a/b-binding protein CP29 [Coccomyxa subellipsoidea
           C-169]
          Length = 267

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 39/68 (57%), Positives = 51/68 (75%)
 Frame = -3

Query: 229 SRSYQKFQKDARWLPNTPRPDWLDGTLPGDRGFDPLGLAKPAEYLQYSPDAQNINNAQNF 50
           +R+Y+KF  DA WLPNT RP WLDG+LPGDRGFDPL L+KP+E+LQ   D  +IN + N 
Sbjct: 42  TRTYKKFDGDALWLPNTQRPAWLDGSLPGDRGFDPLELSKPSEFLQVDLDQSDINKSVNK 101

Query: 49  PGKLEGQW 26
            G + G++
Sbjct: 102 AGGIVGKY 109


>ref|XP_005845614.1| hypothetical protein CHLNCDRAFT_56266 [Chlorella variabilis]
           gi|307105262|gb|EFN53512.1| hypothetical protein
           CHLNCDRAFT_56266 [Chlorella variabilis]
          Length = 276

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 40/69 (57%), Positives = 47/69 (68%)
 Frame = -3

Query: 232 GSRSYQKFQKDARWLPNTPRPDWLDGTLPGDRGFDPLGLAKPAEYLQYSPDAQNINNAQN 53
           G   Y+++  DA WLPNT RP WLDG+LPGDRGFDPLGL+KP EYLQ   D    NNA N
Sbjct: 43  GGAGYRQYDGDALWLPNTSRPAWLDGSLPGDRGFDPLGLSKPVEYLQVDLDQLEQNNAVN 102

Query: 52  FPGKLEGQW 26
             G + G +
Sbjct: 103 KAGSVVGSF 111


>gb|ABD37915.1| light-harvesting chlorophyll-a/b binding protein Lhcb4
           [Chlamydomonas incerta]
          Length = 259

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 38/71 (53%), Positives = 51/71 (71%)
 Frame = -3

Query: 247 SGSPGGSRSYQKFQKDARWLPNTPRPDWLDGTLPGDRGFDPLGLAKPAEYLQYSPDAQNI 68
           +G+  G   Y+K+Q DA WLPNT RP+WLDG+LPGDRGFDPLGL+KP+E++    D  + 
Sbjct: 41  TGTRSGGVGYRKYQGDALWLPNTARPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQ 100

Query: 67  NNAQNFPGKLE 35
           N  +N  G +E
Sbjct: 101 NVGKNNKGTVE 111


>gb|AAP79139.1| chlorophyll a/b-binding protein CP29 [Bigelowiella natans]
          Length = 291

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 40/65 (61%), Positives = 48/65 (73%)
 Frame = -3

Query: 214 KFQKDARWLPNTPRPDWLDGTLPGDRGFDPLGLAKPAEYLQYSPDAQNINNAQNFPGKLE 35
           K  +D  WLPNT RP WLDG+LPGDRGFDPLGL+KPAEYLQ+  D  + N A N  G++ 
Sbjct: 66  KNNEDPLWLPNTERPGWLDGSLPGDRGFDPLGLSKPAEYLQFDVDQLDQNAAVNRAGRVI 125

Query: 34  GQWRG 20
           GQ+ G
Sbjct: 126 GQYDG 130


>ref|XP_011400395.1| Chlorophyll a-b binding protein CP29 [Auxenochlorella
           protothecoides] gi|675354988|gb|KFM27428.1| Chlorophyll
           a-b binding protein CP29 [Auxenochlorella
           protothecoides]
          Length = 320

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 40/76 (52%), Positives = 50/76 (65%), Gaps = 6/76 (7%)
 Frame = -3

Query: 235 GGSRSYQ------KFQKDARWLPNTPRPDWLDGTLPGDRGFDPLGLAKPAEYLQYSPDAQ 74
           GG  SY       + Q +  WLPNTPRP+WLDG+LPGDRGFDPLGL+KP  Y+Q   DA 
Sbjct: 78  GGRSSYNLGRGSTRKQGETLWLPNTPRPEWLDGSLPGDRGFDPLGLSKPTSYIQMDLDAL 137

Query: 73  NINNAQNFPGKLEGQW 26
           + N+A N  G + G +
Sbjct: 138 DQNSAVNKAGGVVGSF 153


>ref|XP_005646238.1| hypothetical protein COCSUDRAFT_67011 [Coccomyxa subellipsoidea
           C-169] gi|384248209|gb|EIE21694.1| hypothetical protein
           COCSUDRAFT_67011 [Coccomyxa subellipsoidea C-169]
          Length = 316

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 36/65 (55%), Positives = 44/65 (67%)
 Frame = -3

Query: 202 DARWLPNTPRPDWLDGTLPGDRGFDPLGLAKPAEYLQYSPDAQNINNAQNFPGKLEGQWR 23
           DA WLPNT RP WLDG+LPGDRGFDPLGL+ P +YLQ   D  + N A N  G + G++ 
Sbjct: 78  DALWLPNTERPAWLDGSLPGDRGFDPLGLSSPQDYLQVGIDQLDQNKAVNKAGAIVGKFA 137

Query: 22  GDEGK 8
             + K
Sbjct: 138 APKTK 142


>gb|ABK26282.1| unknown [Picea sitchensis]
          Length = 288

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 34/59 (57%), Positives = 40/59 (67%)
 Frame = -3

Query: 193 WLPNTPRPDWLDGTLPGDRGFDPLGLAKPAEYLQYSPDAQNINNAQNFPGKLEGQWRGD 17
           WLP    P+WLDG+L GD GFDPLGL KP+EYLQY  D+ + N   N PG L G + GD
Sbjct: 69  WLPGAKAPEWLDGSLVGDYGFDPLGLGKPSEYLQYDVDSLDQNLDLNLPGDLLGDFVGD 127


>gb|ABK25779.1| unknown [Picea sitchensis]
          Length = 288

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 34/59 (57%), Positives = 40/59 (67%)
 Frame = -3

Query: 193 WLPNTPRPDWLDGTLPGDRGFDPLGLAKPAEYLQYSPDAQNINNAQNFPGKLEGQWRGD 17
           WLP    P+WLDG+L GD GFDPLGL KP+EYLQY  D+ + N   N PG L G + GD
Sbjct: 69  WLPGAKAPEWLDGSLVGDYGFDPLGLGKPSEYLQYDVDSLDQNLDLNLPGDLLGDFVGD 127


>gb|ABK21281.1| unknown [Picea sitchensis] gi|116780920|gb|ABK21880.1| unknown
           [Picea sitchensis] gi|116785937|gb|ABK23915.1| unknown
           [Picea sitchensis] gi|116792210|gb|ABK26276.1| unknown
           [Picea sitchensis] gi|224284045|gb|ACN39760.1| unknown
           [Picea sitchensis] gi|224285097|gb|ACN40276.1| unknown
           [Picea sitchensis]
          Length = 288

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 34/59 (57%), Positives = 40/59 (67%)
 Frame = -3

Query: 193 WLPNTPRPDWLDGTLPGDRGFDPLGLAKPAEYLQYSPDAQNINNAQNFPGKLEGQWRGD 17
           WLP    P+WLDG+L GD GFDPLGL KP+EYLQY  D+ + N   N PG L G + GD
Sbjct: 69  WLPGAKAPEWLDGSLVGDYGFDPLGLGKPSEYLQYDVDSLDQNLDLNLPGDLLGDFVGD 127


>ref|XP_008373917.1| PREDICTED: chlorophyll a-b binding protein CP29.3,
           chloroplastic-like [Malus domestica]
          Length = 286

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 35/64 (54%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
 Frame = -3

Query: 217 QKFQKDAR--WLPNTPRPDWLDGTLPGDRGFDPLGLAKPAEYLQYSPDAQNINNAQNFPG 44
           +KF    R  W P    P+WLDG+LPGDRGFDP GL KPAEYLQY  D  + N A+N  G
Sbjct: 55  KKFDDGERLVWFPGVEPPEWLDGSLPGDRGFDPFGLGKPAEYLQYDYDGLDQNLAKNVAG 114

Query: 43  KLEG 32
            + G
Sbjct: 115 DIIG 118


>emb|CEG00441.1| Chlorophyll A-B binding protein, plant [Ostreococcus tauri]
          Length = 257

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 34/65 (52%), Positives = 43/65 (66%)
 Frame = -3

Query: 202 DARWLPNTPRPDWLDGTLPGDRGFDPLGLAKPAEYLQYSPDAQNINNAQNFPGKLEGQWR 23
           D  W P   RP WLDG+LPGDRGFDP GL KPAEYLQ+  DA + + A+N  G + G+ +
Sbjct: 40  DELWRPGAVRPAWLDGSLPGDRGFDPFGLGKPAEYLQFDLDALDGSAARNPSGNVIGKLK 99

Query: 22  GDEGK 8
             + K
Sbjct: 100 KADSK 104


>ref|XP_010095100.1| Chlorophyll a-b binding protein [Morus notabilis]
           gi|587868871|gb|EXB58206.1| Chlorophyll a-b binding
           protein [Morus notabilis]
          Length = 278

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
 Frame = -3

Query: 226 RSYQKFQKDAR--WLPNTPRPDWLDGTLPGDRGFDPLGLAKPAEYLQYSPDAQNINNAQN 53
           ++  KF    R  W P T  P+WLDGT+ GDRGFDP G AKPAEYLQ+  D+ + N A+N
Sbjct: 47  KAQPKFSSGERLVWFPGTEPPEWLDGTMVGDRGFDPFGFAKPAEYLQFELDSLDQNLAKN 106

Query: 52  FPGKLEG 32
             G++ G
Sbjct: 107 VAGEVIG 113


>ref|XP_009345742.1| PREDICTED: chlorophyll a-b binding protein CP29.3,
           chloroplastic-like [Pyrus x bretschneideri]
          Length = 302

 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
 Frame = -3

Query: 217 QKFQKDAR--WLPNTPRPDWLDGTLPGDRGFDPLGLAKPAEYLQYSPDAQNINNAQNFPG 44
           +KF    R  W P    P+WLDG+LPGDRGFDP GL KPAEYLQ+  D  + N A+N  G
Sbjct: 74  KKFDDGERLVWFPGVEPPEWLDGSLPGDRGFDPFGLGKPAEYLQFDYDGLDQNLAKNVAG 133

Query: 43  KLEG 32
            + G
Sbjct: 134 DIIG 137


>ref|XP_004500683.1| PREDICTED: chlorophyll a-b binding protein CP29.3, chloroplastic
           [Cicer arietinum]
          Length = 276

 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 32/54 (59%), Positives = 38/54 (70%)
 Frame = -3

Query: 193 WLPNTPRPDWLDGTLPGDRGFDPLGLAKPAEYLQYSPDAQNINNAQNFPGKLEG 32
           W P    P+WLDG+L GDRGFDPLG AKPAEYLQY  D+ + N A+N  G + G
Sbjct: 58  WFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIG 111